Fungal Genomics

General Properties

Protein ID	Agabi119p4|606100
Gene name
Location	scaffold_03a:1833065..1833770
Strand	+
Gene length (bp)	705
Transcript length (bp)	705
Coding sequence length (bp)	705
Protein length (aa)	235

Overview

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PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF14223	Retrotran_gag_2	gag-polypeptide of LTR copia-type	1.2E-12	38	162

Swissprot hits

(None)

GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID	5
Orthogroup	218
Change Orthofinder run	5: Agaricus - all strains

Species	Protein ID
Agaricus bisporus var bisporus H39	AgabiH39|082250
Agaricus bisporus var bisporus H97	AgabiH97|082250
Agaricus bisporus var burnettii H119p4	Agabi119p4|564700
Agaricus bisporus var burnettii H119p4	Agabi119p4|606100 (this protein)
Agaricus bisporus var burnettii H119p4	Agabi119p4|637100
Agaricus bisporus var burnettii H119p4	Agabi119p4|770150
Agaricus bisporus var burnettii H119p4	Agabi119p4|770800

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Agabi119p4|606100 MVNGSNNSAWEMSSSPAPPLQSTDPAELQARTLLSAWASAIIKSHLPNSMLSQAAAQTDARALWSWLEGQYGQKG PTFAYECFVTAQNFKINDSADPLSAIADLYALFAAVESTGALIHKSIRTMMLLNALPNRFEHVASNILAEKRSVA NLKWEETRARIIVAWRNPHTVANAACFHQQNQPRPKWDNKKPDQGQGKSQGSGSGSGSGQNQNKQQQNQQKKEGE QQSDDKEKK*
Coding	>Agabi119p4|606100 ATGGTCAATGGCTCCAATAATTCGGCCTGGGAAATGAGCAGTTCCCCTGCTCCTCCCTTGCAAAGCACAGACCCA GCTGAGTTACAAGCTCGCACTCTGCTCTCGGCCTGGGCATCTGCAATTATCAAGTCCCACCTTCCAAATTCGATG CTCAGTCAAGCAGCCGCTCAAACGGACGCTAGAGCTCTTTGGAGTTGGCTGGAAGGCCAGTACGGCCAGAAAGGA CCAACATTCGCTTACGAGTGTTTTGTCACAGCTCAAAATTTCAAAATAAACGACTCCGCCGATCCATTGTCTGCG ATCGCAGATCTCTACGCATTATTTGCCGCTGTCGAGAGCACCGGTGCGTTGATCCACAAATCGATCCGCACCATG ATGCTCCTCAACGCTCTCCCCAACCGGTTCGAGCATGTTGCTTCGAACATTCTAGCTGAGAAAAGGTCGGTTGCC AATCTTAAATGGGAGGAAACTCGTGCCCGCATCATTGTTGCATGGCGCAACCCCCATACAGTTGCTAATGCTGCG TGTTTCCACCAGCAAAACCAGCCGAGACCCAAATGGGACAATAAAAAACCCGATCAAGGTCAGGGTAAGTCCCAA GGCTCTGGTTCTGGTTCTGGCTCCGGCCAGAATCAAAATAAGCAACAACAAAATCAGCAGAAGAAGGAAGGCGAG CAGCAGAGTGACGACAAGGAGAAGAAGTAA
Transcript	>Agabi119p4|606100 ATGGTCAATGGCTCCAATAATTCGGCCTGGGAAATGAGCAGTTCCCCTGCTCCTCCCTTGCAAAGCACAGACCCA GCTGAGTTACAAGCTCGCACTCTGCTCTCGGCCTGGGCATCTGCAATTATCAAGTCCCACCTTCCAAATTCGATG CTCAGTCAAGCAGCCGCTCAAACGGACGCTAGAGCTCTTTGGAGTTGGCTGGAAGGCCAGTACGGCCAGAAAGGA CCAACATTCGCTTACGAGTGTTTTGTCACAGCTCAAAATTTCAAAATAAACGACTCCGCCGATCCATTGTCTGCG ATCGCAGATCTCTACGCATTATTTGCCGCTGTCGAGAGCACCGGTGCGTTGATCCACAAATCGATCCGCACCATG ATGCTCCTCAACGCTCTCCCCAACCGGTTCGAGCATGTTGCTTCGAACATTCTAGCTGAGAAAAGGTCGGTTGCC AATCTTAAATGGGAGGAAACTCGTGCCCGCATCATTGTTGCATGGCGCAACCCCCATACAGTTGCTAATGCTGCG TGTTTCCACCAGCAAAACCAGCCGAGACCCAAATGGGACAATAAAAAACCCGATCAAGGTCAGGGTAAGTCCCAA GGCTCTGGTTCTGGTTCTGGCTCCGGCCAGAATCAAAATAAGCAACAACAAAATCAGCAGAAGAAGGAAGGCGAG CAGCAGAGTGACGACAAGGAGAAGAAGTAA
Gene	>Agabi119p4|606100 ATGGTCAATGGCTCCAATAATTCGGCCTGGGAAATGAGCAGTTCCCCTGCTCCTCCCTTGCAAAGCACAGACCCA GCTGAGTTACAAGCTCGCACTCTGCTCTCGGCCTGGGCATCTGCAATTATCAAGTCCCACCTTCCAAATTCGATG CTCAGTCAAGCAGCCGCTCAAACGGACGCTAGAGCTCTTTGGAGTTGGCTGGAAGGCCAGTACGGCCAGAAAGGA CCAACATTCGCTTACGAGTGTTTTGTCACAGCTCAAAATTTCAAAATAAACGACTCCGCCGATCCATTGTCTGCG ATCGCAGATCTCTACGCATTATTTGCCGCTGTCGAGAGCACCGGTGCGTTGATCCACAAATCGATCCGCACCATG ATGCTCCTCAACGCTCTCCCCAACCGGTTCGAGCATGTTGCTTCGAACATTCTAGCTGAGAAAAGGTCGGTTGCC AATCTTAAATGGGAGGAAACTCGTGCCCGCATCATTGTTGCATGGCGCAACCCCCATACAGTTGCTAATGCTGCG TGTTTCCACCAGCAAAACCAGCCGAGACCCAAATGGGACAATAAAAAACCCGATCAAGGTCAGGGTAAGTCCCAA GGCTCTGGTTCTGGTTCTGGCTCCGGCCAGAATCAAAATAAGCAACAACAAAATCAGCAGAAGAAGGAAGGCGAG CAGCAGAGTGACGACAAGGAGAAGAAGTAA