© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Agabi119p4|603650 |
| Gene name | |
| Location | scaffold_03a:1476665..1477748 |
| Strand | + |
| Gene length (bp) | 1083 |
| Transcript length (bp) | 1038 |
| Coding sequence length (bp) | 1038 |
| Protein length (aa) | 346 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13880 | Acetyltransf_13 | ESCO1/2 acetyl-transferase | 6.5E-18 | 276 | 337 |
| PF13878 | zf-C2H2_3 | zinc-finger of acetyl-transferase ESCO | 2.8E-10 | 78 | 113 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O42917|ESO1_SCHPO | N-acetyltransferase eso1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=eso1 PE=1 SV=1 | 65 | 335 | 2.0E-18 |
| sp|Q6C668|ECO1_YARLI | N-acetyltransferase ECO1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=ECO1 PE=3 SV=1 | 67 | 345 | 2.0E-15 |
| sp|Q5FWF5|ESCO1_HUMAN | N-acetyltransferase ESCO1 OS=Homo sapiens GN=ESCO1 PE=1 SV=3 | 90 | 339 | 6.0E-13 |
| sp|Q69Z69|ESCO1_MOUSE | N-acetyltransferase ESCO1 OS=Mus musculus GN=Esco1 PE=2 SV=2 | 90 | 339 | 7.0E-13 |
| sp|A7UL74|CTF7_ARATH | Protein CHROMOSOME TRANSMISSION FIDELITY 7 OS=Arabidopsis thaliana GN=CTF7 PE=1 SV=1 | 75 | 337 | 3.0E-10 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O42917|ESO1_SCHPO | N-acetyltransferase eso1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=eso1 PE=1 SV=1 | 65 | 335 | 2.0E-18 |
| sp|Q6C668|ECO1_YARLI | N-acetyltransferase ECO1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=ECO1 PE=3 SV=1 | 67 | 345 | 2.0E-15 |
| sp|Q5FWF5|ESCO1_HUMAN | N-acetyltransferase ESCO1 OS=Homo sapiens GN=ESCO1 PE=1 SV=3 | 90 | 339 | 6.0E-13 |
| sp|Q69Z69|ESCO1_MOUSE | N-acetyltransferase ESCO1 OS=Mus musculus GN=Esco1 PE=2 SV=2 | 90 | 339 | 7.0E-13 |
| sp|A7UL74|CTF7_ARATH | Protein CHROMOSOME TRANSMISSION FIDELITY 7 OS=Arabidopsis thaliana GN=CTF7 PE=1 SV=1 | 75 | 337 | 3.0E-10 |
| sp|Q56NI9|ESCO2_HUMAN | N-acetyltransferase ESCO2 OS=Homo sapiens GN=ESCO2 PE=1 SV=1 | 91 | 335 | 6.0E-10 |
| sp|Q5SPR8|ESCO2_DANRE | N-acetyltransferase ESCO2 OS=Danio rerio GN=esco2 PE=2 SV=1 | 90 | 335 | 2.0E-08 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 61 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Agabi119p4|603650 MHVKHTYSSRVSSQRKPDSASSTSVVAKRKRPLEEVLTTASSNVPTIPPMKRQRKLSVGNAAYKKKQKPSSSSSS LTQLHFSIDKSTLRTCPLCNLSYTKGAPEDESLHRTHCVRVQRGMEWGKEEERESSKIGVVEVASQVKVGKSGKR GRIISCPVDCSGKIGSKISALLQTINLSLSSPALRQECIRNCKIYMFLLPQTSANPGSSSLGSSREKIVGCVVAQ RISSAMAIAEEEVKVNDDADNGDKENLGRGGHLVMVDSGTGLFCHPEPLPTPMGVPRLFVPSTYRRQGIASALLD AAAANFIHGCPLDPRKGQVAFTQPTGDGKALMVRWGGGGARIYEE* |
| Coding | >Agabi119p4|603650 ATGCACGTCAAACACACATATAGCTCTCGAGTCTCTTCGCAACGAAAGCCTGATAGCGCATCTTCAACTTCTGTA GTGGCTAAGCGTAAACGACCTTTGGAAGAGGTATTAACGACAGCTTCGAGCAATGTTCCAACCATTCCTCCCATG AAGCGCCAAAGAAAGCTGTCTGTTGGGAATGCTGCCTACAAGAAGAAACAAAAGCCGTCGTCATCATCATCATCA TTGACTCAACTCCACTTCTCAATCGACAAAAGCACACTTCGTACTTGTCCATTGTGCAATTTGTCTTATACCAAA GGGGCACCTGAAGATGAAAGTCTTCATCGGACGCATTGCGTGCGGGTACAAAGAGGCATGGAATGGGGGAAAGAG GAGGAAAGGGAAAGTTCCAAGATTGGAGTTGTCGAAGTTGCGAGTCAGGTTAAAGTTGGAAAAAGTGGCAAACGC GGAAGAATCATTTCATGTCCCGTGGATTGTTCAGGCAAAATTGGCTCCAAGATATCCGCTCTTTTACAAACTATT AATTTAAGCCTATCTTCACCAGCGTTAAGACAAGAATGTATCCGAAATTGCAAGATATACATGTTTCTTCTGCCG CAAACGTCTGCGAATCCAGGTAGTTCTAGTCTCGGTTCCAGCCGAGAAAAGATTGTGGGTTGCGTTGTGGCACAA AGAATATCCAGCGCGATGGCAATTGCTGAAGAAGAAGTGAAGGTAAACGATGATGCTGATAATGGAGATAAAGAG AATCTGGGACGAGGGGGACATCTAGTCATGGTCGACAGTGGGACGGGCTTATTCTGTCACCCGGAACCCCTTCCG ACACCTATGGGTGTTCCGCGGTTATTCGTGCCGTCAACATACCGACGGCAAGGAATAGCGAGTGCACTACTGGAT GCGGCTGCGGCAAATTTTATACATGGATGTCCTCTTGATCCGAGGAAGGGACAGGTGGCATTTACACAGCCGACG GGGGATGGAAAGGCGCTAATGGTCAGATGGGGGGGAGGCGGTGCGAGGATTTATGAAGAGTGA |
| Transcript | >Agabi119p4|603650 ATGCACGTCAAACACACATATAGCTCTCGAGTCTCTTCGCAACGAAAGCCTGATAGCGCATCTTCAACTTCTGTA GTGGCTAAGCGTAAACGACCTTTGGAAGAGGTATTAACGACAGCTTCGAGCAATGTTCCAACCATTCCTCCCATG AAGCGCCAAAGAAAGCTGTCTGTTGGGAATGCTGCCTACAAGAAGAAACAAAAGCCGTCGTCATCATCATCATCA TTGACTCAACTCCACTTCTCAATCGACAAAAGCACACTTCGTACTTGTCCATTGTGCAATTTGTCTTATACCAAA GGGGCACCTGAAGATGAAAGTCTTCATCGGACGCATTGCGTGCGGGTACAAAGAGGCATGGAATGGGGGAAAGAG GAGGAAAGGGAAAGTTCCAAGATTGGAGTTGTCGAAGTTGCGAGTCAGGTTAAAGTTGGAAAAAGTGGCAAACGC GGAAGAATCATTTCATGTCCCGTGGATTGTTCAGGCAAAATTGGCTCCAAGATATCCGCTCTTTTACAAACTATT AATTTAAGCCTATCTTCACCAGCGTTAAGACAAGAATGTATCCGAAATTGCAAGATATACATGTTTCTTCTGCCG CAAACGTCTGCGAATCCAGGTAGTTCTAGTCTCGGTTCCAGCCGAGAAAAGATTGTGGGTTGCGTTGTGGCACAA AGAATATCCAGCGCGATGGCAATTGCTGAAGAAGAAGTGAAGGTAAACGATGATGCTGATAATGGAGATAAAGAG AATCTGGGACGAGGGGGACATCTAGTCATGGTCGACAGTGGGACGGGCTTATTCTGTCACCCGGAACCCCTTCCG ACACCTATGGGTGTTCCGCGGTTATTCGTGCCGTCAACATACCGACGGCAAGGAATAGCGAGTGCACTACTGGAT GCGGCTGCGGCAAATTTTATACATGGATGTCCTCTTGATCCGAGGAAGGGACAGGTGGCATTTACACAGCCGACG GGGGATGGAAAGGCGCTAATGGTCAGATGGGGGGGAGGCGGTGCGAGGATTTATGAAGAGTGA |
| Gene | >Agabi119p4|603650 ATGCACGTCAAACACACATATAGCTCTCGAGTCTCTTCGCAACGAAAGCCTGATAGCGCATCTTCAACTTCTGTA GTGGCTAAGCGTAAACGACCTTTGGAAGAGGTATTAACGACAGCTTCGAGCAATGTTCCAACCATTCCTCCCATG AAGCGCCAAAGAAAGCTGTCTGTTGGGAATGCTGCCTACAAGAAGAAACAAAAGCCGTCGTCATCATCATCATCA TTGACTCAACTCCACTTCTCAATCGACAAAAGCACACTTCGTACTTGTCCATTGTGCAATTTGTCTTATACCAAA GGGGCACCTGAAGATGAAAGTCTTCATCGGACGCATTGCGTGCGGGTACAAAGAGGCATGGAATGGGGGAAAGAG GAGGAAAGGGAAAGTTCCAAGATTGGAGTTGTCGAAGTTGCGAGTCAGGTTAAAGTTGGAAAAAGTGGCAAACGC GGAAGAATCATTTCATGTCCCGTGGATTGTTCAGGCAAAATTGGCTCCAAGGTCCGTATACAACACAAATGCTAC ATATTTACTAATGTTCTACAGATATCCGCTCTTTTACAAACTATTAATTTAAGCCTATCTTCACCAGCGTTAAGA CAAGAATGTATCCGAAATTGCAAGATATACATGTTTCTTCTGCCGCAAACGTCTGCGAATCCAGGTAGTTCTAGT CTCGGTTCCAGCCGAGAAAAGATTGTGGGTTGCGTTGTGGCACAAAGAATATCCAGCGCGATGGCAATTGCTGAA GAAGAAGTGAAGGTAAACGATGATGCTGATAATGGAGATAAAGAGAATCTGGGACGAGGGGGACATCTAGTCATG GTCGACAGTGGGACGGGCTTATTCTGTCACCCGGAACCCCTTCCGACACCTATGGGTGTTCCGCGGTTATTCGTG CCGTCAACATACCGACGGCAAGGAATAGCGAGTGCACTACTGGATGCGGCTGCGGCAAATTTTATACATGGATGT CCTCTTGATCCGAGGAAGGGACAGGTGGCATTTACACAGCCGACGGGGGATGGAAAGGCGCTAATGGTCAGATGG GGGGGAGGCGGTGCGAGGATTTATGAAGAGTGA |