Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|602600
Gene name
Locationscaffold_03a:1071306..1073515
Strand-
Gene length (bp)2209
Transcript length (bp)1737
Coding sequence length (bp)1737
Protein length (aa) 579

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00400 WD40 WD domain, G-beta repeat 2.9E-01 346 372
PF00400 WD40 WD domain, G-beta repeat 3.4E-02 435 465

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P0CS57|CMR1_CRYNB DNA damage-binding protein CMR1 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=CNBH2930 PE=3 SV=1 1 574 7.0E-114
sp|P0CS56|CMR1_CRYNJ DNA damage-binding protein CMR1 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=CNI03070 PE=3 SV=1 1 574 7.0E-114
sp|Q4PGT8|CMR1_USTMA DNA damage-binding protein CMR1 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=UMAG_00675 PE=3 SV=1 1 573 9.0E-80
sp|Q0UYV9|CMR1_PHANO DNA damage-binding protein CMR1 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) GN=SNOG_03055 PE=3 SV=1 3 570 9.0E-61
sp|A1DNV8|CMR1_NEOFI DNA damage-binding protein cmr1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=NFIA_058290 PE=3 SV=1 3 570 3.0E-52
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Swissprot ID Swissprot Description Start End E-value
sp|P0CS57|CMR1_CRYNB DNA damage-binding protein CMR1 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=CNBH2930 PE=3 SV=1 1 574 7.0E-114
sp|P0CS56|CMR1_CRYNJ DNA damage-binding protein CMR1 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=CNI03070 PE=3 SV=1 1 574 7.0E-114
sp|Q4PGT8|CMR1_USTMA DNA damage-binding protein CMR1 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=UMAG_00675 PE=3 SV=1 1 573 9.0E-80
sp|Q0UYV9|CMR1_PHANO DNA damage-binding protein CMR1 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) GN=SNOG_03055 PE=3 SV=1 3 570 9.0E-61
sp|A1DNV8|CMR1_NEOFI DNA damage-binding protein cmr1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=NFIA_058290 PE=3 SV=1 3 570 3.0E-52
sp|Q1E6Q0|CMR1_COCIM DNA damage-binding protein CMR1 OS=Coccidioides immitis (strain RS) GN=CIMG_01763 PE=3 SV=1 2 570 3.0E-52
sp|Q4WLU1|CMR1_ASPFU DNA damage-binding protein cmr1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=AFUA_6G12330 PE=3 SV=1 3 570 2.0E-51
sp|B0Y8S0|CMR1_ASPFC DNA damage-binding protein cmr1 OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) GN=AFUB_078330 PE=3 SV=1 3 570 3.0E-51
sp|A1CU75|CMR1_ASPCL DNA damage-binding protein cmr1 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=ACLA_085580 PE=3 SV=1 3 570 2.0E-49
sp|Q5B6U3|CMR1_EMENI DNA damage-binding protein cmr1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=AN3737 PE=3 SV=1 3 570 7.0E-48
sp|Q2HHH2|CMR1_CHAGB DNA damage-binding protein CMR1 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) GN=CHGG_00332 PE=3 SV=1 158 570 9.0E-48
sp|Q0CSP9|CMR1_ASPTN DNA damage-binding protein cmr1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=ATEG_03285 PE=3 SV=1 3 570 2.0E-46
sp|Q2UUT4|CMR1_ASPOR DNA damage-binding protein cmr1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=AO090009000186 PE=3 SV=1 3 570 2.0E-45
sp|Q6C0U2|CMR1_YARLI DNA damage-binding protein CMR1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0F21747g PE=3 SV=1 4 570 3.0E-43
sp|Q6CT00|CMR1_KLULA DNA damage-binding protein CMR1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=KLLA0C16533g PE=3 SV=1 1 571 4.0E-43
sp|A3LWH8|CMR1_PICST DNA damage-binding protein CMR1 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) GN=PRW1 PE=3 SV=2 1 570 3.0E-42
sp|Q12510|CMR1_YEAST DNA damage-binding protein CMR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CMR1 PE=1 SV=1 1 577 9.0E-42
sp|Q75BS7|CMR1_ASHGO DNA damage-binding protein CMR1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=ACR194C PE=3 SV=1 1 574 6.0E-39
sp|A5DAQ7|CMR1_PICGU DNA damage-binding protein CMR1 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) GN=PGUG_00362 PE=3 SV=2 4 570 8.0E-39
sp|A7TL17|CMR1_VANPO DNA damage-binding protein CMR1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=Kpol_530p43 PE=3 SV=1 1 575 1.0E-37
sp|Q6FQU2|CMR1_CANGA DNA damage-binding protein CMR1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=CAGL0I03542g PE=3 SV=1 1 573 2.0E-37
sp|Q6BKH9|CMR1_DEBHA DNA damage-binding protein CMR1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=DEHA2F21868g PE=3 SV=2 1 570 3.0E-37
sp|Q59S45|CMR1_CANAL DNA damage-binding protein CMR1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CaJ7.0141 PE=3 SV=1 4 570 5.0E-34
sp|Q7S1H9|CMR1_NEUCR DNA damage-binding protein cmr1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=NCU09302 PE=3 SV=1 172 376 2.0E-29
sp|Q4KLQ5|WDR76_XENLA WD repeat-containing protein 76 OS=Xenopus laevis GN=wdr76 PE=2 SV=1 3 566 4.0E-22
sp|B2KIQ4|WDR76_RHIFE WD repeat-containing protein 76 OS=Rhinolophus ferrumequinum GN=WDR76 PE=3 SV=2 186 566 8.0E-20
sp|A6PWY4|WDR76_MOUSE WD repeat-containing protein 76 OS=Mus musculus GN=Wdr76 PE=1 SV=1 4 566 3.0E-19
sp|Q9H967|WDR76_HUMAN WD repeat-containing protein 76 OS=Homo sapiens GN=WDR76 PE=1 SV=2 186 573 2.0E-16
sp|A9X1C6|WDR76_PAPAN WD repeat-containing protein 76 OS=Papio anubis GN=WDR76 PE=3 SV=1 186 573 2.0E-16
sp|Q7S1H9|CMR1_NEUCR DNA damage-binding protein cmr1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=NCU09302 PE=3 SV=1 451 570 2.0E-13
sp|Q92466|DDB2_HUMAN DNA damage-binding protein 2 OS=Homo sapiens GN=DDB2 PE=1 SV=1 176 478 1.0E-09
sp|Q0VBY8|DDB2_BOVIN DNA damage-binding protein 2 OS=Bos taurus GN=DDB2 PE=2 SV=1 176 377 5.0E-08
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GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0003674 molecular_function No
GO:0005488 binding No

SignalP

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SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 48 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|602600
MPKLSQYELEREANIARNRALMEDLELSRGASSLGIAKPKPAAKPVQPAKRKRKETEELPRRQSARLRKSVVDPN
ETPAQRKKRLEKEEALRIKQEEARFEAEEKARTAKRPRHEDLVLHKLVEQDPEDISTLDTVFKSVVDESHPRRIG
DFDAFEYDDDSDKREAREVAKLREKLQSLKVVARAKVNQNRIYSAAYHPEVSKDLIFFGDKHGELGIWDARAAPD
EVLDDDEDTEVGTREGGKYWRLQCHWPASSKSSISSIKFDPVNAHTVYTTSYDRTIRSLSFTTGVSQEVYASEND
ALINNVDLTPSGNEMWICDGAGGVTHLDLRERQHKVRRYGLSDIKIGCISVNPSRPHFILTASNNRTLKIWDIRK
LRVLAGESPDATLSTAATSSPLRKRKADSAKRSIVEYSHDVVTKFDDSEEGVGLLRGDYAHDKSCSSAYWDPRGR
QVVSTSYDNNIRLWNLDGPTLDSSDPFESFRPFSRLRHDCQTGRWVTILRAQWSPNPDAYPHFTIGNMKHSLDIF
SGKGVPLVRLSDPSRISAVQAVTCSHPNIVERAVSGNASGRCVLWAPEDVGSS*
Coding >Agabi119p4|602600
ATGCCCAAACTATCTCAGTATGAACTTGAGCGAGAGGCCAATATCGCCCGCAATCGCGCCCTTATGGAGGACCTC
GAACTCAGTCGAGGGGCCTCTAGCCTTGGTATAGCTAAGCCTAAGCCAGCGGCGAAACCTGTGCAGCCTGCAAAG
CGAAAACGCAAGGAGACTGAAGAGCTTCCTAGGCGACAATCCGCCCGACTGAGAAAGAGTGTTGTCGACCCTAAT
GAGACTCCAGCACAGAGAAAGAAACGTCTGGAAAAGGAAGAGGCCCTTCGTATTAAACAAGAAGAAGCACGGTTT
GAAGCAGAGGAGAAAGCTCGTACTGCCAAAAGGCCTCGTCATGAAGACCTGGTCCTTCATAAATTAGTGGAGCAG
GATCCAGAAGACATCTCGACCCTCGATACTGTGTTCAAAAGTGTTGTCGATGAATCACATCCTCGTCGTATCGGA
GACTTTGATGCCTTCGAGTACGACGACGACTCAGACAAGCGGGAGGCACGAGAAGTCGCGAAATTGAGGGAGAAG
CTTCAGTCATTGAAAGTTGTCGCTCGAGCGAAAGTCAACCAAAATCGTATATATAGTGCTGCATACCATCCTGAA
GTTTCCAAAGACCTTATCTTTTTTGGCGATAAACATGGTGAATTGGGTATTTGGGATGCAAGAGCGGCACCGGAT
GAAGTTCTAGATGACGATGAGGACACTGAAGTTGGCACTCGTGAAGGCGGCAAATATTGGCGATTACAATGTCAC
TGGCCAGCTTCCTCGAAGTCTTCGATAAGCAGTATTAAATTTGATCCGGTCAATGCGCACACTGTATATACTACT
TCTTATGATCGTACTATACGCAGCCTTTCGTTCACCACAGGGGTTTCGCAAGAGGTTTACGCGAGCGAAAATGAC
GCCCTTATTAATAATGTAGATCTCACGCCTTCGGGAAACGAAATGTGGATATGCGACGGTGCGGGCGGAGTGACA
CATCTTGACCTTCGCGAGAGACAACACAAAGTTCGACGATATGGATTATCTGATATTAAGATTGGATGCATCAGT
GTCAACCCGTCGCGCCCTCACTTTATCCTAACAGCAAGTAACAATCGTACTCTAAAAATTTGGGATATTCGCAAG
TTGCGAGTCTTAGCTGGCGAGTCTCCTGACGCAACACTATCAACTGCGGCAACTTCATCACCATTACGAAAGAGG
AAAGCTGATTCCGCAAAGAGATCCATAGTTGAATACAGTCACGATGTCGTTACGAAATTTGACGACTCCGAGGAA
GGAGTGGGTCTACTTCGTGGTGACTATGCTCATGACAAGTCTTGTAGCTCCGCTTATTGGGACCCTCGGGGCAGA
CAGGTGGTTAGCACAAGCTACGATAATAATATACGGTTGTGGAATCTCGATGGGCCAACACTGGATAGCTCGGAT
CCATTCGAAAGTTTCAGGCCTTTTTCAAGATTACGTCACGACTGCCAAACAGGGCGCTGGGTGACCATCTTGCGG
GCTCAATGGAGTCCAAATCCTGATGCCTATCCTCACTTCACGATTGGGAATATGAAACACTCACTAGACATCTTT
TCTGGAAAGGGCGTACCTCTTGTTCGTTTATCAGATCCATCCCGGATTTCCGCCGTTCAGGCTGTTACATGTTCA
CATCCCAATATTGTTGAACGTGCTGTTAGCGGTAATGCTAGTGGTCGTTGCGTCCTATGGGCCCCAGAAGATGTC
GGATCGTCTTGA
Transcript >Agabi119p4|602600
ATGCCCAAACTATCTCAGTATGAACTTGAGCGAGAGGCCAATATCGCCCGCAATCGCGCCCTTATGGAGGACCTC
GAACTCAGTCGAGGGGCCTCTAGCCTTGGTATAGCTAAGCCTAAGCCAGCGGCGAAACCTGTGCAGCCTGCAAAG
CGAAAACGCAAGGAGACTGAAGAGCTTCCTAGGCGACAATCCGCCCGACTGAGAAAGAGTGTTGTCGACCCTAAT
GAGACTCCAGCACAGAGAAAGAAACGTCTGGAAAAGGAAGAGGCCCTTCGTATTAAACAAGAAGAAGCACGGTTT
GAAGCAGAGGAGAAAGCTCGTACTGCCAAAAGGCCTCGTCATGAAGACCTGGTCCTTCATAAATTAGTGGAGCAG
GATCCAGAAGACATCTCGACCCTCGATACTGTGTTCAAAAGTGTTGTCGATGAATCACATCCTCGTCGTATCGGA
GACTTTGATGCCTTCGAGTACGACGACGACTCAGACAAGCGGGAGGCACGAGAAGTCGCGAAATTGAGGGAGAAG
CTTCAGTCATTGAAAGTTGTCGCTCGAGCGAAAGTCAACCAAAATCGTATATATAGTGCTGCATACCATCCTGAA
GTTTCCAAAGACCTTATCTTTTTTGGCGATAAACATGGTGAATTGGGTATTTGGGATGCAAGAGCGGCACCGGAT
GAAGTTCTAGATGACGATGAGGACACTGAAGTTGGCACTCGTGAAGGCGGCAAATATTGGCGATTACAATGTCAC
TGGCCAGCTTCCTCGAAGTCTTCGATAAGCAGTATTAAATTTGATCCGGTCAATGCGCACACTGTATATACTACT
TCTTATGATCGTACTATACGCAGCCTTTCGTTCACCACAGGGGTTTCGCAAGAGGTTTACGCGAGCGAAAATGAC
GCCCTTATTAATAATGTAGATCTCACGCCTTCGGGAAACGAAATGTGGATATGCGACGGTGCGGGCGGAGTGACA
CATCTTGACCTTCGCGAGAGACAACACAAAGTTCGACGATATGGATTATCTGATATTAAGATTGGATGCATCAGT
GTCAACCCGTCGCGCCCTCACTTTATCCTAACAGCAAGTAACAATCGTACTCTAAAAATTTGGGATATTCGCAAG
TTGCGAGTCTTAGCTGGCGAGTCTCCTGACGCAACACTATCAACTGCGGCAACTTCATCACCATTACGAAAGAGG
AAAGCTGATTCCGCAAAGAGATCCATAGTTGAATACAGTCACGATGTCGTTACGAAATTTGACGACTCCGAGGAA
GGAGTGGGTCTACTTCGTGGTGACTATGCTCATGACAAGTCTTGTAGCTCCGCTTATTGGGACCCTCGGGGCAGA
CAGGTGGTTAGCACAAGCTACGATAATAATATACGGTTGTGGAATCTCGATGGGCCAACACTGGATAGCTCGGAT
CCATTCGAAAGTTTCAGGCCTTTTTCAAGATTACGTCACGACTGCCAAACAGGGCGCTGGGTGACCATCTTGCGG
GCTCAATGGAGTCCAAATCCTGATGCCTATCCTCACTTCACGATTGGGAATATGAAACACTCACTAGACATCTTT
TCTGGAAAGGGCGTACCTCTTGTTCGTTTATCAGATCCATCCCGGATTTCCGCCGTTCAGGCTGTTACATGTTCA
CATCCCAATATTGTTGAACGTGCTGTTAGCGGTAATGCTAGTGGTCGTTGCGTCCTATGGGCCCCAGAAGATGTC
GGATCGTCTTGA
Gene >Agabi119p4|602600
ATGCCCAAACTATCTCAGTAGTGAGTTTACCATCTGTTGCAATGTTTTCCGAATTTCTCAAATGATCTAGTGAAC
TTGAGCGAGAGGCCAATATCGCCCGCAATCGCGCCCTTATGGAGGACCTCGAACTCAGTCGAGGGGCCTCTAGCC
TTGGTATAGCTAAGCCTAAGCCAGCGGCGAAACCTGTGCAGCCTGCAAAGCGAAAACGCAAGGAGACTGAAGAGC
TTCCTAGGCGACAATCCGCCCGACTGAGAAAGAGTGTTGTCGACCCTAATGAGACTCCAGCACAGAGAAAGAAAC
GTCTGGTACGTTGTTTTACGCCTAGATTAGAAAACATGTTAACGGATCACAGGAAAAGGAAGAGGCCCTTCGTAT
TAAACAAGAAGAAGCACGGTTTGAAGCAGAGGAGAAAGCTCGTACTGCCAAAAGGCCTCGTCATGAAGACCTGGT
CCTTCATAAATTAGTGGAGCAGGATCCAGAAGACATCTCGACCCTCGATACTGTGTTCAAAAGTGTTGTCGATGA
ATCACATCCTCGTCGTATCGGAGACTTTGATGCCTTCGAGTACGACGACGACTCAGACAAGCGGGAGGCACGAGA
AGTCGCGAAATTGAGGGAGAAGCTTCAGTCATTGAAAGTTGTCGCTCGAGCGAAAGTCAACCAAAATCGTATATA
TAGTGCTGCATACCATCCTGAAGTTTCCAAAGACCTTATCTTTTTTGGCGGTAAGTTGGTCATCATCGTGAAGTT
ATATTTCCATTCATGCCTTTTGCCAGATAAACATGGTGAATTGGGTATTTGGGATGCAAGAGCGGCACCGGATGA
AGTTCTAGATGACGATGAGGACACTGAAGTTGGCACTCGTGAAGGCGGCAAATATTGGCGATTACAATGTCACTG
GCCAGCTTCCTCGAAGTCTTCGATAAGCAGTATTAAATTTGATCCGGTCAATGCGCACACTGTGGGTTGCTATTT
CGTCTCTTCTGTTTGCATTCTGATCTTGCATCCAGGTATATACTACTTCTTATGATCGTACTATACGCAGCCTTT
CGTTCACCACAGGGGTTTCGCAAGAGGTTTACGCGAGCGAAAATGACGCCCTTATTAATAATGTAGATCTCACGC
CTTCGGGAAACGAAATGTGGATATGCGACGGTGCGGGCGGAGTGACACATCTTGACCTTCGCGAGAGACAACACA
AAGTTCGACGATATGGATTATCTGATATTAAGATTGGATGCATCAGTGTCAACCCGTCGCGCCCTCACTTTATCC
TAACAGCAAGTAACAATCGTACTCTAAAGTATGCCTTTCCGTGCCATAAATGATCTGTTTCTATCTGGGTACTGA
CGAGCGTCAAAGAATTTGGGATATTCGCAAGTTGCGAGTCTTAGCTGGCGAGTCTCCTGACGCAACACTATCAAC
TGCGGCAACTTCATCACCATTACGAAAGAGGAAAGCTGATTCCGCAAAGAGATCCATAGTTGAATACAGTCACGA
TGTCGTTACGAAATTTGACGACTCCGAGGAAGGAGTGGGTCTACTTCGTGGTGACTATGCTCATGACAAGTCTTG
TAGCTCCGCTTATTGGGACCCTCGGGGCAGACAGGTGGTTAGCACAAGCTACGATAATAATATACGGTGTATGTG
ACACTCATTCTGAAAACCCTTCCAGAAGCTGACCTCTTCCATTCCATAGTGTGGAATCTCGATGGGCCAACACTG
GATAGCTCGGATCCATTCGAAAGTTTCAGGCCTTTTTCAAGATTACGTCACGACTGCCAAACAGTAAGTCGCTTG
CATTAGATATACGAAGAATAAGATTGACCTCGCTTCTAGGGGCGCTGGGTGACCATCTTGCGGGCTCAATGGAGT
CCAAATCCTGATGCCTATCCTCACTTCACGGTCAGTGTCATCCGTCTTCTTCATTCAGACCTTCTAACCGAGCTA
TGCAGATTGGGAATATGAAACACTCACTAGACATCTTTTCTGGAAAGGGCGTACCTCTTGTTCGTTTATCAGATC
CATCCCGGTAAATCCGTTTCTTTCCTTATTTACCCGCAAAGTCGGTTGTTCAACCGTTCCGTGCAGGATTTCCGC
CGTTCAGGCTGTTACATGTTCACATCCCAATATTGTTGAACGTGCTGTTAGCGGTAATGCTAGTGGTCGTTGCGT
CCTATGGGCCCCAGAAGATGTCGGATCGTCTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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