© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Agabi119p4|601350 |
| Gene name | |
| Location | scaffold_03a:723769..725255 |
| Strand | + |
| Gene length (bp) | 1486 |
| Transcript length (bp) | 1101 |
| Coding sequence length (bp) | 1101 |
| Protein length (aa) | 367 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF04670 | Gtr1_RagA | Gtr1/RagA G protein conserved region | 9.9E-82 | 4 | 244 |
| PF00071 | Ras | Ras family | 2.7E-07 | 4 | 136 |
| PF08477 | Roc | Ras of Complex, Roc, domain of DAPkinase | 1.0E-06 | 4 | 125 |
| PF00025 | Arf | ADP-ribosylation factor family | 2.6E-06 | 3 | 161 |
| PF01926 | MMR_HSR1 | 50S ribosome-binding GTPase | 2.9E-05 | 4 | 100 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q63486|RRAGA_RAT | Ras-related GTP-binding protein A OS=Rattus norvegicus GN=Rraga PE=1 SV=1 | 1 | 311 | 8.0E-106 |
| sp|Q80X95|RRAGA_MOUSE | Ras-related GTP-binding protein A OS=Mus musculus GN=Rraga PE=1 SV=1 | 1 | 311 | 8.0E-106 |
| sp|Q7L523|RRAGA_HUMAN | Ras-related GTP-binding protein A OS=Homo sapiens GN=RRAGA PE=1 SV=1 | 1 | 311 | 8.0E-106 |
| sp|Q3SX43|RRAGA_BOVIN | Ras-related GTP-binding protein A OS=Bos taurus GN=RRAGA PE=2 SV=1 | 1 | 311 | 8.0E-106 |
| sp|Q54IK1|RRAGA_DICDI | Ras-related GTP-binding protein A OS=Dictyostelium discoideum GN=ragA PE=2 SV=1 | 1 | 308 | 5.0E-102 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q63486|RRAGA_RAT | Ras-related GTP-binding protein A OS=Rattus norvegicus GN=Rraga PE=1 SV=1 | 1 | 311 | 8.0E-106 |
| sp|Q80X95|RRAGA_MOUSE | Ras-related GTP-binding protein A OS=Mus musculus GN=Rraga PE=1 SV=1 | 1 | 311 | 8.0E-106 |
| sp|Q7L523|RRAGA_HUMAN | Ras-related GTP-binding protein A OS=Homo sapiens GN=RRAGA PE=1 SV=1 | 1 | 311 | 8.0E-106 |
| sp|Q3SX43|RRAGA_BOVIN | Ras-related GTP-binding protein A OS=Bos taurus GN=RRAGA PE=2 SV=1 | 1 | 311 | 8.0E-106 |
| sp|Q54IK1|RRAGA_DICDI | Ras-related GTP-binding protein A OS=Dictyostelium discoideum GN=ragA PE=2 SV=1 | 1 | 308 | 5.0E-102 |
| sp|Q5VZM2|RRAGB_HUMAN | Ras-related GTP-binding protein B OS=Homo sapiens GN=RRAGB PE=1 SV=1 | 1 | 311 | 6.0E-99 |
| sp|Q63487|RRAGB_RAT | Ras-related GTP-binding protein B OS=Rattus norvegicus GN=RragB PE=1 SV=1 | 1 | 311 | 2.0E-98 |
| sp|Q6NTA4|RRAGB_MOUSE | Ras-related GTP-binding protein B OS=Mus musculus GN=Rragb PE=2 SV=1 | 1 | 311 | 2.0E-98 |
| sp|O74824|GTR1_SCHPO | GTP-binding protein gtr1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gtr1 PE=3 SV=1 | 1 | 304 | 4.0E-98 |
| sp|Q00582|GTR1_YEAST | GTP-binding protein GTR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GTR1 PE=1 SV=1 | 2 | 308 | 6.0E-84 |
| sp|O74544|GTR2_SCHPO | GTP-binding protein gtr2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gtr2 PE=3 SV=1 | 3 | 218 | 4.0E-17 |
| sp|Q99K70|RRAGC_MOUSE | Ras-related GTP-binding protein C OS=Mus musculus GN=Rragc PE=1 SV=1 | 2 | 212 | 1.0E-15 |
| sp|Q9HB90|RRAGC_HUMAN | Ras-related GTP-binding protein C OS=Homo sapiens GN=RRAGC PE=1 SV=1 | 2 | 212 | 1.0E-15 |
| sp|Q9NQL2|RRAGD_HUMAN | Ras-related GTP-binding protein D OS=Homo sapiens GN=RRAGD PE=1 SV=1 | 1 | 212 | 1.0E-13 |
| sp|Q7TT45|RRAGD_MOUSE | Ras-related GTP-binding protein D OS=Mus musculus GN=Rragd PE=2 SV=2 | 1 | 212 | 3.0E-13 |
| sp|P53290|GTR2_YEAST | GTP-binding protein GTR2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GTR2 PE=1 SV=1 | 2 | 212 | 2.0E-11 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0003924 | GTPase activity | Yes |
| GO:0005525 | GTP binding | Yes |
| GO:0019001 | guanyl nucleotide binding | No |
| GO:0016817 | hydrolase activity, acting on acid anhydrides | No |
| GO:0016462 | pyrophosphatase activity | No |
| GO:0003674 | molecular_function | No |
| GO:0097367 | carbohydrate derivative binding | No |
| GO:0000166 | nucleotide binding | No |
| GO:0016787 | hydrolase activity | No |
| GO:0036094 | small molecule binding | No |
| GO:0005488 | binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0032555 | purine ribonucleotide binding | No |
| GO:0017111 | nucleoside-triphosphatase activity | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0043168 | anion binding | No |
| GO:0003824 | catalytic activity | No |
| GO:0032561 | guanyl ribonucleotide binding | No |
| GO:0043167 | ion binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0017076 | purine nucleotide binding | No |
| GO:0032553 | ribonucleotide binding | No |
| GO:0035639 | purine ribonucleoside triphosphate binding | No |
| GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 19 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Agabi119p4|601350 MKKKVLLMGASGSGKTSMRSLIFSNNPASLTSRLGATIDVEQNHVRFLGDLILNLWDCGGQDSFMDSYLTTQRST IFQQVGVMIYVFDIESAEAEKDMEYYRDCLDGLRYYSPDAAIFLLLHKMDLVREPQQLLEKKRLELEEASGDVAI SVFGTTIFDQTLYKAWSSIVHTLIPNAGILSKHLSIFAQACGATEVILFERTTFLVIATSSSGSGVASSAVPTYA KDGSDHQLESTRYERTSELVKAFKYTCSRVREEFHTFEVDLPDFSAVLDELTRNTYVLVILHDPTIETAAVKLNI RLARSKFETLQLKILPVPEVFILKLIVNTLDSFMLLHIRTFTLFNNIQRYSMIKSYYRCFHERNWY* |
| Coding | >Agabi119p4|601350 ATGAAGAAAAAGGTTCTTCTCATGGGTGCCTCCGGCAGTGGGAAGACATCCATGAGATCACTGATCTTTTCGAAC AATCCGGCCTCTCTCACGTCGCGCTTGGGTGCTACAATCGATGTGGAACAAAACCATGTTCGGTTTCTCGGTGAC CTCATCCTCAACTTGTGGGACTGTGGTGGTCAAGACTCTTTCATGGACTCATATTTGACAACTCAACGGTCCACC ATATTCCAACAAGTTGGCGTTATGATCTATGTCTTTGACATCGAGTCTGCCGAGGCCGAAAAAGATATGGAGTAT TACCGTGACTGCCTCGACGGTCTACGCTACTACAGCCCAGATGCTGCCATTTTCCTCCTTCTACATAAAATGGAC CTCGTCCGCGAACCGCAACAACTCCTCGAAAAAAAGCGGTTGGAATTGGAAGAAGCCAGCGGCGATGTCGCCATC TCCGTGTTTGGAACAACCATTTTTGACCAGACCCTGTACAAGGCTTGGTCAAGTATCGTTCACACTCTCATCCCA AATGCCGGCATTCTTTCGAAGCATCTGTCCATTTTCGCCCAAGCGTGTGGTGCAACCGAAGTCATTCTATTCGAA CGCACAACTTTCCTCGTCATAGCTACTTCATCCTCTGGTTCTGGTGTAGCATCATCCGCCGTGCCGACATACGCT AAGGACGGATCTGACCATCAACTCGAATCCACACGGTACGAACGTACTTCTGAACTTGTGAAGGCGTTCAAATAC ACATGCTCCCGTGTCCGAGAAGAGTTTCATACCTTCGAAGTTGATCTGCCTGACTTTAGCGCTGTCTTGGATGAA TTGACCAGGAACACTTACGTTCTCGTCATTCTTCATGACCCTACAATAGAAACGGCGGCCGTTAAACTCAATATC CGTCTGGCACGAAGCAAATTCGAAACGCTTCAGTTAAAAATCCTTCCGGTTCCCGAAGTTTTTATTCTTAAACTT ATTGTTAATACTCTCGATTCCTTTATGTTGTTGCACATTAGGACTTTTACATTATTCAATAATATACAGAGATAT AGCATGATAAAATCATATTATCGCTGCTTCCATGAGCGTAATTGGTACTGA |
| Transcript | >Agabi119p4|601350 ATGAAGAAAAAGGTTCTTCTCATGGGTGCCTCCGGCAGTGGGAAGACATCCATGAGATCACTGATCTTTTCGAAC AATCCGGCCTCTCTCACGTCGCGCTTGGGTGCTACAATCGATGTGGAACAAAACCATGTTCGGTTTCTCGGTGAC CTCATCCTCAACTTGTGGGACTGTGGTGGTCAAGACTCTTTCATGGACTCATATTTGACAACTCAACGGTCCACC ATATTCCAACAAGTTGGCGTTATGATCTATGTCTTTGACATCGAGTCTGCCGAGGCCGAAAAAGATATGGAGTAT TACCGTGACTGCCTCGACGGTCTACGCTACTACAGCCCAGATGCTGCCATTTTCCTCCTTCTACATAAAATGGAC CTCGTCCGCGAACCGCAACAACTCCTCGAAAAAAAGCGGTTGGAATTGGAAGAAGCCAGCGGCGATGTCGCCATC TCCGTGTTTGGAACAACCATTTTTGACCAGACCCTGTACAAGGCTTGGTCAAGTATCGTTCACACTCTCATCCCA AATGCCGGCATTCTTTCGAAGCATCTGTCCATTTTCGCCCAAGCGTGTGGTGCAACCGAAGTCATTCTATTCGAA CGCACAACTTTCCTCGTCATAGCTACTTCATCCTCTGGTTCTGGTGTAGCATCATCCGCCGTGCCGACATACGCT AAGGACGGATCTGACCATCAACTCGAATCCACACGGTACGAACGTACTTCTGAACTTGTGAAGGCGTTCAAATAC ACATGCTCCCGTGTCCGAGAAGAGTTTCATACCTTCGAAGTTGATCTGCCTGACTTTAGCGCTGTCTTGGATGAA TTGACCAGGAACACTTACGTTCTCGTCATTCTTCATGACCCTACAATAGAAACGGCGGCCGTTAAACTCAATATC CGTCTGGCACGAAGCAAATTCGAAACGCTTCAGTTAAAAATCCTTCCGGTTCCCGAAGTTTTTATTCTTAAACTT ATTGTTAATACTCTCGATTCCTTTATGTTGTTGCACATTAGGACTTTTACATTATTCAATAATATACAGAGATAT AGCATGATAAAATCATATTATCGCTGCTTCCATGAGCGTAATTGGTACTGA |
| Gene | >Agabi119p4|601350 ATGAAGAAAAAGGTGAATGCGTCTGCCTCTCGACGTCTGTCTCTGGCTGACTGTCACGTAGGTTCTTCTCATGGG TGCCTCCGGCAGTGGGAAGACATCCATGAGATCACTGATCTTGTGAGCAAAAAACCTCTCGTTTCTCCTCCTTGG CTTGCCCATCTTGTTCACCAGTTCGAACAATCCGGCCTCTCTCACGTCGCGCTTGGGTGCTACAATCGATGTGGA ACAAAACCATGTTCGGTTTCTCGGTGACCTCATCCTCAACTTGTGGGACTGTGGTGGTCAAGACTCTTTCATGGA CTCATATTTGACAACTCAACGGTCCACCATATTCCAACAAGTTGGCGTTATGATCTATGTCTTTGACATCGAGTC TGCCGAGGCCGAAAAAGATATGGAGTATTACCGTGACTGCCTCGACGGTCTACGCTACTACAGCCCAGATGCTGC CATTTTCCTCCTTCTACATAAAATGGACCTCGTCCGCGAACCGCAACAACTCCTCGAAAAAAAGCGGTTGGAATT GGAAGAAGCCAGCGGCGATGTCGCCATCTCCGTGTTTGGAACAACCATTTTTGACCAGACCCTGTACAAGGTATG CTCTCGCCCTCCTCTGACCCTTCATTCTTCTGACCTGGACCAATCGTACCAGGCTTGGTCAAGTATCGTTCACAC TCTCATCCCAAATGCCGGCATTCTTTCGAAGCATCTGTCCATTTTCGCCCAAGCGTGTGGTGCAACCGAAGTCAT TCTATTCGAACGCACAACTTTCCTCGTCATAGCTACTTCATCCTCTGGTTCTGGTGTAGCATCATCCGCCGTGCC GACATACGCTAAGGACGGATCTGACCATCAACTCGAATCCACACGGTACGAACGTACTTCTGAACTTGTGAAGGC GTTCAAATACACATGCTCCCGTGTCCGAGAAGAGTTTCATACCTTCGAAGTTGATCTGCCTGACTTTAGCGCTGT CTTGGATGAATTGACCAGGAACACTTACGTTCTCGTCATTCTTCATGACCCTACAATAGGTTGGTGCTTCCCAAG CTGTTATTGATCTTATTGATCCATCCATCGCGCAGAAACGGCGGCCGTTAAACTCAATATCCGTCTGGCACGAAG CAAATTCGAAACGCTTCAGGTGGATAGTCTCGGCTGACAGCAAGGTTGAAATTTCGCCCCCTATCTCCATCCCAT CCAAGTTAAAAATCCTTCCGGTTCCCGAAGTTTTTATTCTTAAACTTATTGTTAATACGTAATTGTGACCATAGA CTTTCTCGCCATTTCTTATCGCTTAGTCCCATAGTCTCGATTCCTTTATGTTGTTGCACATTAGGACTTTTACAT TATTCAATAATATACAGAGATATAGCATGATAAAATCATATGTGAGTTCAAAAAGCATCTGTCAGCACTTGTATC AACGATACTTATATCAATTTCATGCTAGTATCGCTGCTTCCATGAGCGTAATTGGTACTGA |