Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|598900
Gene name
Locationscaffold_03a:404025..404519
Strand-
Gene length (bp)494
Transcript length (bp)327
Coding sequence length (bp)327
Protein length (aa) 109

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PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P49073|HYP2_AGABI Hydrophobin-2 OS=Agaricus bisporus GN=hypC PE=3 SV=2 1 104 4.0E-12
sp|P49072|HYP1_AGABI Hydrophobin-1 OS=Agaricus bisporus GN=hypA PE=2 SV=1 1 104 1.0E-10

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|598900
MFSRVPVAILVVVPVLVSATPAPGRPQTASVVSLRNVATIIQAIKFRRSPRYLKFPSTFSVPAVLSDLPISSNNC
NAQAVCCDKSNEIIRNLFSRLACSPVNVDPYEG*
Coding >Agabi119p4|598900
ATGTTTTCTCGCGTTCCTGTCGCTATTCTCGTCGTTGTCCCCGTTCTCGTTTCTGCAACTCCTGCTCCCGGAAGG
CCTCAAACCGCCAGTGTGGTTAGTCTGCGCAACGTCGCGACTATAATTCAGGCCATCAAGTTCAGGCGGTCCCCG
AGATATTTAAAATTCCCATCAACCTTCTCGGTACCGGCTGTACTTTCCGACCTTCCCATCAGTAGCAATAACTGT
AATGCTCAGGCTGTCTGCTGTGACAAATCTAATGAAATCATCAGAAATTTATTTTCCCGACTTGCTTGCTCTCCT
GTCAATGTCGACCCATATGAAGGTTGA
Transcript >Agabi119p4|598900
ATGTTTTCTCGCGTTCCTGTCGCTATTCTCGTCGTTGTCCCCGTTCTCGTTTCTGCAACTCCTGCTCCCGGAAGG
CCTCAAACCGCCAGTGTGGTTAGTCTGCGCAACGTCGCGACTATAATTCAGGCCATCAAGTTCAGGCGGTCCCCG
AGATATTTAAAATTCCCATCAACCTTCTCGGTACCGGCTGTACTTTCCGACCTTCCCATCAGTAGCAATAACTGT
AATGCTCAGGCTGTCTGCTGTGACAAATCTAATGAAATCATCAGAAATTTATTTTCCCGACTTGCTTGCTCTCCT
GTCAATGTCGACCCATATGAAGGTTGA
Gene >Agabi119p4|598900
ATGTTTTCTCGCGTTCCTGTCGCTATTCTCGTCGTTGTCCCCGTTCTCGTTTCTGTGAGTTGACTACGTGCGCTT
CATTGGCTGAAAACCCTTACTCTCTTTTGCAGGCAACTCCTGCTCCCGGAAGGCCTCAAACCGCCAGTGTGGTTA
GTCTGCGCAACGTCGGTGAGCTCTATTGCTGTAGGTATTTTTTTCCATGGCATCGGCGTACTCCATTTCCTCAGC
GACTATAATTCAGGCCATCAAGTTCAGGCGGTCCCCGAGATATTTAAAATTCCCATCAACCTTCTCGGTACCGGC
TGTACTTTCCGACCTTCCCATCAGTAGCAATAACTGTAATGCTCAGGCTGTCTGCTGTGACAAATCTAATGAAAT
CGTAAGTTAGAGCTTTTGGCCATTGGCTTAAATTTGTAACTATTTTTTCTCTTCAGATCAGAAATTTATTTTCCC
GACTTGCTTGCTCTCCTGTCAATGTCGACCCATATGAAGGTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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