© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Agabi119p4|594200 |
| Gene name | |
| Location | scaffold_02:3131865..3135118 |
| Strand | + |
| Gene length (bp) | 3253 |
| Transcript length (bp) | 2001 |
| Coding sequence length (bp) | 2001 |
| Protein length (aa) | 667 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00394 | Cu-oxidase | Multicopper oxidase | 2.8E-45 | 313 | 454 |
| PF07731 | Cu-oxidase_2 | Multicopper oxidase | 3.9E-37 | 516 | 640 |
| PF07732 | Cu-oxidase_3 | Multicopper oxidase | 1.2E-33 | 201 | 300 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q12729|LAC1_PLEOS | Laccase-1 OS=Pleurotus ostreatus GN=POX1 PE=2 SV=1 | 165 | 661 | 0.0E+00 |
| sp|Q12739|LAC2_PLEOS | Laccase-2 OS=Pleurotus ostreatus GN=POX2 PE=1 SV=1 | 163 | 665 | 0.0E+00 |
| sp|Q99046|LAC2_TRAVI | Laccase-2 OS=Trametes villosa GN=LCC2 PE=3 SV=1 | 148 | 661 | 0.0E+00 |
| sp|Q12718|LAC2_TRAVE | Laccase-2 OS=Trametes versicolor GN=LCC2 PE=1 SV=1 | 148 | 661 | 0.0E+00 |
| sp|Q12719|LAC4_TRAVE | Laccase-4 OS=Trametes versicolor GN=LCC4 PE=3 SV=1 | 150 | 666 | 0.0E+00 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q12729|LAC1_PLEOS | Laccase-1 OS=Pleurotus ostreatus GN=POX1 PE=2 SV=1 | 165 | 661 | 0.0E+00 |
| sp|Q12739|LAC2_PLEOS | Laccase-2 OS=Pleurotus ostreatus GN=POX2 PE=1 SV=1 | 163 | 665 | 0.0E+00 |
| sp|Q99046|LAC2_TRAVI | Laccase-2 OS=Trametes villosa GN=LCC2 PE=3 SV=1 | 148 | 661 | 0.0E+00 |
| sp|Q12718|LAC2_TRAVE | Laccase-2 OS=Trametes versicolor GN=LCC2 PE=1 SV=1 | 148 | 661 | 0.0E+00 |
| sp|Q12719|LAC4_TRAVE | Laccase-4 OS=Trametes versicolor GN=LCC4 PE=3 SV=1 | 150 | 666 | 0.0E+00 |
| sp|Q01679|LAC1_PHLRA | Laccase OS=Phlebia radiata GN=LAC PE=1 SV=2 | 154 | 665 | 0.0E+00 |
| sp|Q99055|LAC4_TRAVI | Laccase-4 OS=Trametes villosa GN=LCC4 PE=3 SV=1 | 150 | 666 | 0.0E+00 |
| sp|O59896|LAC1_PYCCI | Laccase OS=Pycnoporus cinnabarinus GN=LCC3-1 PE=1 SV=1 | 150 | 664 | 0.0E+00 |
| sp|Q99044|LAC1_TRAVI | Laccase-1 OS=Trametes villosa GN=LCC1 PE=3 SV=1 | 150 | 665 | 0.0E+00 |
| sp|Q02497|LAC1_TRAHI | Laccase OS=Trametes hirsuta PE=1 SV=1 | 167 | 661 | 0.0E+00 |
| sp|Q99056|LAC5_TRAVI | Laccase-5 OS=Trametes villosa GN=LCC5 PE=3 SV=2 | 155 | 666 | 0.0E+00 |
| sp|D0VWU3|LAC1_TRAMX | Laccase OS=Trametes maxima PE=1 SV=1 | 166 | 665 | 0.0E+00 |
| sp|Q12717|LAC5_TRAVE | Laccase-5 OS=Trametes versicolor GN=LCC5 PE=2 SV=1 | 155 | 666 | 0.0E+00 |
| sp|Q99049|LAC3_TRAVI | Laccase-3 OS=Trametes villosa GN=LCC3 PE=3 SV=1 | 149 | 660 | 4.0E-175 |
| sp|Q12542|LAC2_AGABI | Laccase-2 OS=Agaricus bisporus GN=lcc2 PE=1 SV=1 | 153 | 661 | 5.0E-163 |
| sp|Q12541|LAC1_AGABI | Laccase-1 OS=Agaricus bisporus GN=lcc1 PE=1 SV=1 | 155 | 661 | 1.0E-159 |
| sp|Q02081|LAC4_THACU | Laccase-4 OS=Thanatephorus cucumeris GN=LCC4 PE=1 SV=1 | 150 | 633 | 9.0E-125 |
| sp|Q02079|LAC3_THACU | Laccase-3 OS=Thanatephorus cucumeris GN=LCC3 PE=2 SV=1 | 150 | 666 | 9.0E-108 |
| sp|P56193|LAC1_THACU | Laccase-1 OS=Thanatephorus cucumeris GN=LCC1 PE=1 SV=1 | 150 | 660 | 3.0E-103 |
| sp|Q02075|LAC2_THACU | Laccase-2 OS=Thanatephorus cucumeris GN=LCC2 PE=2 SV=1 | 158 | 435 | 1.0E-68 |
| sp|Q96WM9|LAC2_BOTFU | Laccase-2 OS=Botryotinia fuckeliana GN=lcc2 PE=2 SV=1 | 173 | 642 | 2.0E-63 |
| sp|P78591|FET3_CANAX | Iron transport multicopper oxidase FET3 OS=Candida albicans GN=FET3 PE=3 SV=1 | 150 | 645 | 3.0E-63 |
| sp|P78722|LAC2_PODAS | Laccase-2 OS=Podospora anserina GN=LAC2 PE=2 SV=1 | 180 | 644 | 6.0E-62 |
| sp|Q12570|LAC1_BOTFU | Laccase-1 OS=Botryotinia fuckeliana GN=lcc1 PE=2 SV=3 | 173 | 665 | 8.0E-60 |
| sp|Q96UM2|LAC3_BOTFU | Laccase-3 (Fragment) OS=Botryotinia fuckeliana GN=lcc3 PE=3 SV=1 | 202 | 635 | 1.0E-59 |
| sp|Q6CII3|FET3_KLULA | Iron transport multicopper oxidase FET3 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=FET3 PE=3 SV=1 | 201 | 645 | 4.0E-59 |
| sp|P43561|FET5_YEAST | Iron transport multicopper oxidase FET5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FET5 PE=1 SV=1 | 160 | 639 | 9.0E-59 |
| sp|P38993|FET3_YEAST | Iron transport multicopper oxidase FET3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FET3 PE=1 SV=2 | 201 | 645 | 2.0E-57 |
| sp|Q09920|FIO1_SCHPO | Iron transport multicopper oxidase fio1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=fio1 PE=3 SV=1 | 148 | 663 | 4.0E-57 |
| sp|Q96WT3|FET3_CANGA | Iron transport multicopper oxidase FET3 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=FET3 PE=3 SV=1 | 201 | 645 | 2.0E-56 |
| sp|Q03966|LAC1_CRYPA | Laccase OS=Cryphonectria parasitica GN=LAC-1 PE=3 SV=1 | 180 | 665 | 6.0E-56 |
| sp|P06811|LAC1_NEUCR | Laccase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=lacc PE=1 SV=3 | 180 | 665 | 4.0E-55 |
| sp|Q70KY3|LAC1_MELAO | Laccase-1 OS=Melanocarpus albomyces GN=LAC1 PE=1 SV=1 | 180 | 639 | 1.0E-52 |
| sp|Q40588|ASO_TOBAC | L-ascorbate oxidase OS=Nicotiana tabacum GN=AAO PE=2 SV=1 | 181 | 637 | 2.0E-50 |
| sp|P14133|ASO_CUCSA | L-ascorbate oxidase OS=Cucumis sativus PE=1 SV=1 | 201 | 637 | 4.0E-49 |
| sp|D4APX3|LAC1_ARTBC | Laccase ARB_05828 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05828 PE=1 SV=1 | 201 | 646 | 4.0E-49 |
| sp|P37064|ASO_CUCPM | L-ascorbate oxidase OS=Cucurbita pepo var. melopepo PE=1 SV=1 | 201 | 642 | 9.0E-49 |
| sp|Q5N7A3|LAC6_ORYSJ | Laccase-6 OS=Oryza sativa subsp. japonica GN=LAC6 PE=2 SV=1 | 202 | 635 | 6.0E-47 |
| sp|P24792|ASO_CUCMA | L-ascorbate oxidase OS=Cucurbita maxima GN=AAO PE=1 SV=2 | 181 | 642 | 7.0E-47 |
| sp|Q9SR40|LAC7_ARATH | Laccase-7 OS=Arabidopsis thaliana GN=LAC7 PE=2 SV=1 | 201 | 635 | 1.0E-44 |
| sp|Q8RYM9|LAC2_ORYSJ | Laccase-2 OS=Oryza sativa subsp. japonica GN=LAC2 PE=2 SV=1 | 201 | 635 | 2.0E-44 |
| sp|Q1PDH6|LAC16_ARATH | Laccase-16 OS=Arabidopsis thaliana GN=LAC16 PE=2 SV=2 | 201 | 638 | 5.0E-44 |
| sp|Q0IQU1|LAC22_ORYSJ | Laccase-22 OS=Oryza sativa subsp. japonica GN=LAC22 PE=2 SV=2 | 144 | 638 | 6.0E-44 |
| sp|O80434|LAC4_ARATH | Laccase-4 OS=Arabidopsis thaliana GN=IRX12 PE=2 SV=2 | 150 | 635 | 1.0E-41 |
| sp|Q9FY79|LAC14_ARATH | Laccase-14 OS=Arabidopsis thaliana GN=LAC14 PE=2 SV=1 | 201 | 635 | 2.0E-41 |
| sp|Q2QUN2|LAC24_ORYSJ | Laccase-24 OS=Oryza sativa subsp. japonica GN=LAC24 PE=2 SV=1 | 201 | 635 | 2.0E-41 |
| sp|Q56YT0|LAC3_ARATH | Laccase-3 OS=Arabidopsis thaliana GN=LAC3 PE=2 SV=2 | 149 | 635 | 3.0E-41 |
| sp|Q0JHP8|LAC8_ORYSJ | Laccase-8 OS=Oryza sativa subsp. japonica GN=LAC8 PE=3 SV=2 | 201 | 635 | 6.0E-41 |
| sp|Q84J37|LAC15_ARATH | Laccase-15 OS=Arabidopsis thaliana GN=TT10 PE=1 SV=1 | 201 | 635 | 3.0E-40 |
| sp|Q2R0L2|LAC19_ORYSJ | Laccase-19 OS=Oryza sativa subsp. japonica GN=LAC19 PE=2 SV=1 | 201 | 635 | 3.0E-40 |
| sp|A2Y9C5|LAC19_ORYSI | Putative laccase-19 OS=Oryza sativa subsp. indica GN=LAC19 PE=3 SV=1 | 201 | 635 | 5.0E-40 |
| sp|Q02075|LAC2_THACU | Laccase-2 OS=Thanatephorus cucumeris GN=LCC2 PE=2 SV=1 | 462 | 663 | 1.0E-39 |
| sp|Q9LFD2|LAC8_ARATH | Laccase-8 OS=Arabidopsis thaliana GN=LAC8 PE=2 SV=1 | 148 | 635 | 4.0E-38 |
| sp|Q0DHL2|LAC12_ORYSJ | Laccase-12/13 OS=Oryza sativa subsp. japonica GN=LAC12 PE=2 SV=1 | 201 | 635 | 4.0E-38 |
| sp|Q5N7B4|LAC7_ORYSJ | Laccase-7 OS=Oryza sativa subsp. japonica GN=LAC7 PE=2 SV=1 | 201 | 648 | 4.0E-38 |
| sp|Q9LFD1|LAC9_ARATH | Laccase-9 OS=Arabidopsis thaliana GN=LAC9 PE=2 SV=1 | 148 | 635 | 2.0E-37 |
| sp|A2XCN6|LAC18_ORYSI | Putative laccase-18 OS=Oryza sativa subsp. indica GN=LAC18 PE=3 SV=1 | 201 | 635 | 3.0E-37 |
| sp|Q6ID18|LAC10_ARATH | Laccase-10 OS=Arabidopsis thaliana GN=LAC10 PE=2 SV=1 | 201 | 635 | 4.0E-37 |
| sp|Q9FLB5|LAC12_ARATH | Laccase-12 OS=Arabidopsis thaliana GN=LAC12 PE=2 SV=1 | 201 | 638 | 5.0E-37 |
| sp|O81081|LAC2_ARATH | Laccase-2 OS=Arabidopsis thaliana GN=LAC2 PE=2 SV=1 | 201 | 636 | 9.0E-37 |
| sp|Q5N9X2|LAC4_ORYSJ | Laccase-4 OS=Oryza sativa subsp. japonica GN=LAC4 PE=2 SV=1 | 202 | 663 | 2.0E-36 |
| sp|Q9ZPY2|LAC6_ARATH | Laccase-6 OS=Arabidopsis thaliana GN=LAC6 PE=2 SV=1 | 201 | 650 | 3.0E-36 |
| sp|Q2R0L0|LAC20_ORYSJ | Laccase-20 OS=Oryza sativa subsp. japonica GN=LAC20 PE=2 SV=1 | 201 | 635 | 3.0E-36 |
| sp|Q9FJD5|LAC17_ARATH | Laccase-17 OS=Arabidopsis thaliana GN=LAC17 PE=2 SV=1 | 201 | 640 | 7.0E-36 |
| sp|Q5N9W4|LAC5_ORYSJ | Putative laccase-5 OS=Oryza sativa subsp. japonica GN=LAC5 PE=3 SV=1 | 201 | 635 | 1.0E-35 |
| sp|Q941X2|LAC3_ORYSJ | Laccase-3 OS=Oryza sativa subsp. japonica GN=LAC3 PE=2 SV=1 | 201 | 635 | 3.0E-35 |
| sp|Q0DHL5|LAC11_ORYSJ | Putative laccase-11 OS=Oryza sativa subsp. japonica GN=LAC11 PE=5 SV=2 | 201 | 648 | 6.0E-35 |
| sp|Q2QZ80|LAC21_ORYSJ | Laccase-21 OS=Oryza sativa subsp. japonica GN=LAC21 PE=2 SV=1 | 201 | 663 | 3.0E-34 |
| sp|Q5ZCW1|LAC1_ORYSJ | Putative laccase-1 OS=Oryza sativa subsp. japonica GN=LAC1 PE=3 SV=1 | 201 | 663 | 1.0E-33 |
| sp|Q8VZA1|LAC11_ARATH | Laccase-11 OS=Arabidopsis thaliana GN=LAC11 PE=2 SV=1 | 201 | 457 | 6.0E-33 |
| sp|Q6Z8L2|LAC9_ORYSJ | Putative laccase-9 OS=Oryza sativa subsp. japonica GN=LAC9 PE=3 SV=1 | 201 | 663 | 8.0E-33 |
| sp|Q04399|GMC1_YEAST | Putative multicopper oxidase GMC1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GMC1 PE=1 SV=1 | 196 | 649 | 2.0E-30 |
| sp|Q9LMS3|LAC1_ARATH | Laccase-1 OS=Arabidopsis thaliana GN=LAC1 PE=2 SV=1 | 201 | 635 | 5.0E-29 |
| sp|Q0IP28|LAC25_ORYSJ | Laccase-25 OS=Oryza sativa subsp. japonica GN=LAC25 PE=3 SV=1 | 201 | 454 | 1.0E-28 |
| sp|Q9LYQ2|LAC13_ARATH | Laccase-13 OS=Arabidopsis thaliana GN=LAC13 PE=2 SV=1 | 201 | 455 | 2.0E-28 |
| sp|Q53LU4|LAC18_ORYSJ | Laccase-18 OS=Oryza sativa subsp. japonica GN=LAC18 PE=2 SV=1 | 201 | 455 | 4.0E-27 |
| sp|Q9SU40|SKU5_ARATH | Monocopper oxidase-like protein SKU5 OS=Arabidopsis thaliana GN=SKU5 PE=1 SV=1 | 201 | 617 | 7.0E-26 |
| sp|A2Y9C2|LAC20_ORYSI | Laccase-20 OS=Oryza sativa subsp. indica GN=LAC20 PE=3 SV=1 | 201 | 427 | 8.0E-26 |
| sp|Q69L99|LAC14_ORYSJ | Laccase-14 OS=Oryza sativa subsp. japonica GN=LAC14 PE=3 SV=1 | 201 | 466 | 1.0E-25 |
| sp|Q9FHN6|SKS2_ARATH | Monocopper oxidase-like protein SKS2 OS=Arabidopsis thaliana GN=SKS2 PE=1 SV=1 | 201 | 524 | 1.0E-24 |
| sp|Q9SIY8|LAC5_ARATH | Laccase-5 OS=Arabidopsis thaliana GN=LAC5 PE=2 SV=1 | 201 | 454 | 4.0E-24 |
| sp|Q2RBK2|LAC17_ORYSJ | Putative laccase-17 OS=Oryza sativa subsp. japonica GN=LAC17 PE=3 SV=1 | 201 | 452 | 6.0E-24 |
| sp|Q10ND7|LAC10_ORYSJ | Laccase-10 OS=Oryza sativa subsp. japonica GN=LAC10 PE=2 SV=1 | 201 | 452 | 3.0E-23 |
| sp|Q2QYS3|LAC23_ORYSJ | Laccase-23 OS=Oryza sativa subsp. japonica GN=LAC23 PE=3 SV=1 | 201 | 452 | 7.0E-23 |
| sp|Q8VXX5|SKS1_ARATH | Monocopper oxidase-like protein SKS1 OS=Arabidopsis thaliana GN=SKS1 PE=1 SV=1 | 147 | 536 | 4.0E-22 |
| sp|I6WZK7|MMCO_MYCTU | Multicopper oxidase MmcO OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=mmcO PE=1 SV=1 | 201 | 420 | 5.0E-20 |
| sp|Q339K6|LAC15_ORYSJ | Laccase-15 OS=Oryza sativa subsp. japonica GN=LAC15 PE=2 SV=1 | 201 | 437 | 7.0E-20 |
| sp|Q47452|PCOA_ECOLX | Copper resistance protein A OS=Escherichia coli GN=pcoA PE=3 SV=1 | 162 | 419 | 8.0E-19 |
| sp|Q00624|ASOL_BRANA | L-ascorbate oxidase homolog OS=Brassica napus GN=Bp10 PE=2 SV=1 | 201 | 524 | 3.0E-18 |
| sp|P29162|ASOL_TOBAC | L-ascorbate oxidase homolog OS=Nicotiana tabacum PE=2 SV=1 | 235 | 452 | 3.0E-18 |
| sp|P59571|COPA_PSESM | Copper resistance protein A homolog OS=Pseudomonas syringae pv. tomato (strain DC3000) GN=copA PE=3 SV=1 | 200 | 444 | 7.0E-17 |
| sp|Q7XE50|LAC16_ORYSJ | Putative laccase-16 OS=Oryza sativa subsp. japonica GN=LAC16 PE=5 SV=1 | 234 | 459 | 7.0E-16 |
| sp|P12374|COPA_PSEUB | Copper resistance protein A OS=Pseudomonas syringae pv. tomato GN=copA PE=1 SV=1 | 200 | 419 | 9.0E-16 |
| sp|P17489|LAC1_EMENI | Laccase-1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=yA PE=2 SV=3 | 201 | 345 | 2.0E-12 |
| sp|Q2RBK2|LAC17_ORYSJ | Putative laccase-17 OS=Oryza sativa subsp. japonica GN=LAC17 PE=3 SV=1 | 432 | 638 | 6.0E-12 |
| sp|Q2QYS3|LAC23_ORYSJ | Laccase-23 OS=Oryza sativa subsp. japonica GN=LAC23 PE=3 SV=1 | 537 | 638 | 7.0E-12 |
| sp|Q339K6|LAC15_ORYSJ | Laccase-15 OS=Oryza sativa subsp. japonica GN=LAC15 PE=2 SV=1 | 561 | 652 | 6.0E-11 |
| sp|Q9LYQ2|LAC13_ARATH | Laccase-13 OS=Arabidopsis thaliana GN=LAC13 PE=2 SV=1 | 503 | 635 | 2.0E-10 |
| sp|Q10ND7|LAC10_ORYSJ | Laccase-10 OS=Oryza sativa subsp. japonica GN=LAC10 PE=2 SV=1 | 542 | 635 | 3.0E-09 |
| sp|Q69L99|LAC14_ORYSJ | Laccase-14 OS=Oryza sativa subsp. japonica GN=LAC14 PE=3 SV=1 | 542 | 635 | 4.0E-09 |
| sp|Q9SIY8|LAC5_ARATH | Laccase-5 OS=Arabidopsis thaliana GN=LAC5 PE=2 SV=1 | 564 | 635 | 1.0E-08 |
| sp|Q8VZA1|LAC11_ARATH | Laccase-11 OS=Arabidopsis thaliana GN=LAC11 PE=2 SV=1 | 564 | 652 | 3.0E-08 |
| sp|Q7XE50|LAC16_ORYSJ | Putative laccase-16 OS=Oryza sativa subsp. japonica GN=LAC16 PE=5 SV=1 | 541 | 663 | 4.0E-08 |
| sp|A2Y9C2|LAC20_ORYSI | Laccase-20 OS=Oryza sativa subsp. indica GN=LAC20 PE=3 SV=1 | 504 | 635 | 7.0E-08 |
| sp|Q53LU4|LAC18_ORYSJ | Laccase-18 OS=Oryza sativa subsp. japonica GN=LAC18 PE=2 SV=1 | 565 | 635 | 2.0E-07 |
| sp|Q8X947|CUEO_ECO57 | Blue copper oxidase CueO OS=Escherichia coli O157:H7 GN=cueO PE=3 SV=1 | 169 | 425 | 4.0E-07 |
| sp|Q6GIX3|MCO_STAAR | Multicopper oxidase mco OS=Staphylococcus aureus (strain MRSA252) GN=mco PE=3 SV=2 | 203 | 298 | 2.0E-06 |
| sp|Q69HT9|MCO_STAAU | Multicopper oxidase mco OS=Staphylococcus aureus GN=mco PE=1 SV=2 | 203 | 298 | 2.0E-06 |
| sp|I6WZK7|MMCO_MYCTU | Multicopper oxidase MmcO OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=mmcO PE=1 SV=1 | 564 | 632 | 5.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016491 | oxidoreductase activity | Yes |
| GO:0005507 | copper ion binding | Yes |
| GO:0043169 | cation binding | No |
| GO:0043167 | ion binding | No |
| GO:0046872 | metal ion binding | No |
| GO:0003824 | catalytic activity | No |
| GO:0005488 | binding | No |
| GO:0046914 | transition metal ion binding | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 21 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 153 | 175 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Agabi119p4|594200 MRKICLGCSHSLSSQPFTYTTQKTVSSRRIGDSQWRLSRGYTRTLTSASASVATAPAKLLTVNETQKCLRNMVRG GDVISYILSHSSRNADQNLKDLDSLILEPVCSATHEMFDVFEIPEHILTPFCDNRNVPEEQVTRNPNLRTDCLTM KRFVLLQSLVAVASAGIGPVADLYVGNRILAPDGFNRSTVLGGTSSSDFGFPAPLITGTKGDRFQLNVINQLTDT TMLRSTSIHWHGLFQAGSSWADGPVGVNQCPIAPGNSFLYDFNVPDQAGTFWYHSHYSTQYCDGLRGAFVVRDPN DPHASLYDVDNDDTVITLADWYHTSAKELSGSFPAEEATLINGLGRYSGGPTSPLAIVNVEAGKRYRFRLVSISC DPFYTFSIDGHDLTIIEADGENTDPLVVDYLEIYAGQRYSVVLNANQPVDNYWIRANSSNGPRDFVGGTNSAILR YAGASNSDPTTELGPRNNRLVENNLHALGSPGVPGTHTIGEADVNINLEILFTPPNVLTVNGAQFIPPTAPVLLQ ILSGTKQATDLLPPGSVYVLPRNAVVELTIPGGSGGSPHPMHLHGHVFDVVRSAGSDTINWDNPVRRDVVNIGTS TSDNATIRFTTDNPGPWIFHCHIDWHLEVGLAVVFAEDPDTIENSTHPAAWDELCPIYDNLPSDEL* |
| Coding | >Agabi119p4|594200 ATGAGGAAGATCTGTCTCGGGTGTTCACATTCACTTTCGTCCCAACCTTTTACATATACTACACAAAAAACCGTC TCATCAAGACGAATCGGTGACAGCCAGTGGCGCCTGAGTCGTGGTTATACTAGGACTTTGACTAGTGCGAGTGCC TCAGTAGCGACGGCTCCTGCAAAACTATTGACAGTCAATGAGACGCAGAAGTGTCTGAGAAACATGGTGAGAGGC GGAGATGTGATTTCTTACATCCTCTCCCACAGCTCCCGCAATGCAGACCAAAACCTGAAGGATCTAGATTCCCTT ATCCTCGAACCGGTATGTTCGGCTACCCACGAGATGTTCGATGTGTTTGAAATCCCTGAACACATTCTTACTCCT TTTTGCGACAACAGAAATGTGCCCGAAGAACAAGTAACACGTAACCCAAACCTTCGAACGGACTGCCTGACCATG AAGCGGTTTGTTCTCCTGCAATCCCTTGTGGCTGTCGCGTCTGCTGGCATAGGACCTGTCGCCGACCTCTATGTT GGCAACAGAATTCTGGCTCCAGATGGCTTTAATCGTTCTACTGTCCTCGGGGGTACTAGTTCATCGGACTTCGGT TTTCCTGCTCCTCTAATTACTGGAACAAAGGGGGATCGCTTTCAGCTCAATGTGATCAATCAGCTCACAGACACG ACAATGCTGCGGAGCACAAGTATTCACTGGCACGGCCTTTTCCAAGCTGGTTCCAGTTGGGCGGATGGCCCTGTC GGAGTCAATCAATGTCCTATAGCGCCAGGCAATTCATTCTTGTATGATTTTAATGTCCCAGATCAAGCAGGAACA TTCTGGTATCATTCACACTATTCTACGCAATACTGTGATGGACTCCGTGGTGCATTTGTCGTTCGCGACCCCAAT GATCCTCATGCTTCTTTATATGATGTAGACAATGATGATACCGTAATCACACTTGCCGATTGGTACCACACTTCA GCGAAAGAACTTTCTGGGTCGTTCCCCGCAGAAGAGGCCACCCTTATCAACGGCCTTGGCCGTTACTCAGGAGGC CCGACATCCCCGTTGGCTATTGTTAACGTTGAAGCAGGGAAGAGGTATCGGTTCCGTCTTGTGTCTATTTCTTGC GATCCGTTTTATACCTTTTCCATCGATGGACATGACCTGACTATCATTGAAGCCGATGGAGAAAATACTGACCCT CTGGTCGTCGATTACCTTGAAATCTATGCCGGGCAACGCTACTCTGTCGTCTTGAACGCAAACCAGCCTGTCGAT AACTATTGGATTCGTGCTAATTCAAGCAATGGTCCAAGAGACTTCGTGGGCGGAACTAACTCTGCCATTCTTCGC TATGCAGGCGCATCCAATTCCGACCCCACCACTGAACTCGGGCCTCGCAATAACCGTTTGGTCGAGAATAACCTC CACGCTCTCGGAAGTCCTGGTGTACCGGGGACTCACACCATCGGAGAGGCTGATGTCAATATCAACCTCGAAATT CTTTTCACCCCTCCGAACGTTTTGACAGTAAATGGCGCGCAATTCATTCCCCCTACTGCCCCTGTTCTTCTTCAA ATCCTAAGTGGCACAAAGCAAGCAACCGATCTCCTACCTCCCGGGAGTGTATATGTCCTCCCGCGGAATGCTGTT GTTGAGTTAACTATCCCTGGTGGATCCGGTGGAAGCCCCCATCCTATGCATTTGCATGGCCATGTCTTCGATGTT GTTCGAAGTGCTGGTAGTGATACGATCAATTGGGACAATCCTGTCCGCCGTGATGTCGTCAATATCGGGACATCG ACTTCCGACAATGCTACTATCCGCTTTACTACCGACAATCCTGGCCCTTGGATTTTCCACTGCCACATTGACTGG CACTTGGAAGTTGGCTTAGCTGTCGTGTTTGCCGAAGATCCTGATACAATCGAAAATTCTACGCATCCCGCTGCT TGGGACGAGCTTTGCCCAATCTATGATAACCTGCCCTCCGATGAGCTCTGA |
| Transcript | >Agabi119p4|594200 ATGAGGAAGATCTGTCTCGGGTGTTCACATTCACTTTCGTCCCAACCTTTTACATATACTACACAAAAAACCGTC TCATCAAGACGAATCGGTGACAGCCAGTGGCGCCTGAGTCGTGGTTATACTAGGACTTTGACTAGTGCGAGTGCC TCAGTAGCGACGGCTCCTGCAAAACTATTGACAGTCAATGAGACGCAGAAGTGTCTGAGAAACATGGTGAGAGGC GGAGATGTGATTTCTTACATCCTCTCCCACAGCTCCCGCAATGCAGACCAAAACCTGAAGGATCTAGATTCCCTT ATCCTCGAACCGGTATGTTCGGCTACCCACGAGATGTTCGATGTGTTTGAAATCCCTGAACACATTCTTACTCCT TTTTGCGACAACAGAAATGTGCCCGAAGAACAAGTAACACGTAACCCAAACCTTCGAACGGACTGCCTGACCATG AAGCGGTTTGTTCTCCTGCAATCCCTTGTGGCTGTCGCGTCTGCTGGCATAGGACCTGTCGCCGACCTCTATGTT GGCAACAGAATTCTGGCTCCAGATGGCTTTAATCGTTCTACTGTCCTCGGGGGTACTAGTTCATCGGACTTCGGT TTTCCTGCTCCTCTAATTACTGGAACAAAGGGGGATCGCTTTCAGCTCAATGTGATCAATCAGCTCACAGACACG ACAATGCTGCGGAGCACAAGTATTCACTGGCACGGCCTTTTCCAAGCTGGTTCCAGTTGGGCGGATGGCCCTGTC GGAGTCAATCAATGTCCTATAGCGCCAGGCAATTCATTCTTGTATGATTTTAATGTCCCAGATCAAGCAGGAACA TTCTGGTATCATTCACACTATTCTACGCAATACTGTGATGGACTCCGTGGTGCATTTGTCGTTCGCGACCCCAAT GATCCTCATGCTTCTTTATATGATGTAGACAATGATGATACCGTAATCACACTTGCCGATTGGTACCACACTTCA GCGAAAGAACTTTCTGGGTCGTTCCCCGCAGAAGAGGCCACCCTTATCAACGGCCTTGGCCGTTACTCAGGAGGC CCGACATCCCCGTTGGCTATTGTTAACGTTGAAGCAGGGAAGAGGTATCGGTTCCGTCTTGTGTCTATTTCTTGC GATCCGTTTTATACCTTTTCCATCGATGGACATGACCTGACTATCATTGAAGCCGATGGAGAAAATACTGACCCT CTGGTCGTCGATTACCTTGAAATCTATGCCGGGCAACGCTACTCTGTCGTCTTGAACGCAAACCAGCCTGTCGAT AACTATTGGATTCGTGCTAATTCAAGCAATGGTCCAAGAGACTTCGTGGGCGGAACTAACTCTGCCATTCTTCGC TATGCAGGCGCATCCAATTCCGACCCCACCACTGAACTCGGGCCTCGCAATAACCGTTTGGTCGAGAATAACCTC CACGCTCTCGGAAGTCCTGGTGTACCGGGGACTCACACCATCGGAGAGGCTGATGTCAATATCAACCTCGAAATT CTTTTCACCCCTCCGAACGTTTTGACAGTAAATGGCGCGCAATTCATTCCCCCTACTGCCCCTGTTCTTCTTCAA ATCCTAAGTGGCACAAAGCAAGCAACCGATCTCCTACCTCCCGGGAGTGTATATGTCCTCCCGCGGAATGCTGTT GTTGAGTTAACTATCCCTGGTGGATCCGGTGGAAGCCCCCATCCTATGCATTTGCATGGCCATGTCTTCGATGTT GTTCGAAGTGCTGGTAGTGATACGATCAATTGGGACAATCCTGTCCGCCGTGATGTCGTCAATATCGGGACATCG ACTTCCGACAATGCTACTATCCGCTTTACTACCGACAATCCTGGCCCTTGGATTTTCCACTGCCACATTGACTGG CACTTGGAAGTTGGCTTAGCTGTCGTGTTTGCCGAAGATCCTGATACAATCGAAAATTCTACGCATCCCGCTGCT TGGGACGAGCTTTGCCCAATCTATGATAACCTGCCCTCCGATGAGCTCTGA |
| Gene | >Agabi119p4|594200 ATGAGGAAGATCTGTCTCGGTGCCTGATCACGACGAGATCAGATCAATTTTGTAATCGGGCAGAGATATCATGGC TTAGATAATAATTAGGTAATTCAAAATTGGTTTCGCAACAGGGTGTTCACATTCACTTTCGTCCCAACCTTTTAC ATATACTACACAAAAAACCGTCTCATCAAGACGAATCGGTGACAGCCAGTGGCGCCTGAGTCGTGGTTATACTAG GACTTTGACTAGTGCGAGTGCCTCAGGTTGGTAGCATGATTACTAGCTGAACAAATTCTACTCACGTCCAAACAA TCGTCGTAGTAGCGACGGTAAGGAACGGAGATTTATCGATCACCGTATTGAATACTTCCTCCTGAGTTAATACCG CAGGCTCCTGCAAAACTATTGGTTAGAACCCACTCAAATGATGGCAAAAGAAACTCACTGCAGCTGCTACTGCCA CGATGAAGACAGTCAATGAGACGCAGAAGTGTCTGAGAAACATGGTGAGAGGCGGAGATGTGATTTCTTGTAAGC ATTCCAGATACTTATATTCTGTAACGCCTGTGTAGCCCCATTCGAGTATCTGATATGGCAAAGACATCCTCTCCC ACAGGTCCCTACGTAAGACATCCCCCCGAACAATATCTGCGCGCTGGTACTGATCTGGCGCGATCGACCGCGTGA AATATCTAGCTCCCGCAATGCAGACCAAAACCTGAAGGATCTAGATTCCCTTATCCTCGTAAGCCCTGCAACATA CTGTACCTTCATACTCGACGCGCAGATGCCGCATACCCATCCAGGAACCGGTATGTTCGGCTACCCACGAGATGT TCGATGTGTTTGAAATCCCTGAACACATTCTTACTCCTTTTTGCGACAACAGAAATGTGCCGTAAGATGGGTATA AATGATTTCATCCTCAGGCTTTTATAAGTAGCGAAGAACAAGTAACACGTAACCCAAACCTTCGAACGGACTGCC TGACCATGAAGCGGTTTGTTCTCCTGCAATCCCTTGTGGCTGTCGCGTCTGCTGGCATAGGACCTGTCGCCGACC TCTATGTTGGCAACAGAATTCTGGCTCCAGATGGCTTTAATCGTTCGTAAGTACTAGCTACCATGAATCAGGATT CTGGTGCTTATGAATTCGAACTTTCCCAGTACTGTCCTCGGGGGTACTAGTTCATCGGACTTCGGTTTTCCTGCT CCTCTAATTACTGGAACAAAGGTCTGCATCATTGGCTCTTTCTGAGGATTGCATGGCTGAAGAAAGATGTTGGAT TAGGGGGATCGCTTTCAGCTCAATGTGATCAATCAGCTCACAGACACGACAATGCTGCGGAGCACAAGTATTGTA AGCCGCCGTCATGATAGGCAGCCTACTCATCGTTTCTCATTCGGTTCTCAAGCACTGGCACGGCCTTTTCCAAGC TGGTTCCAGTTGGGCGGATGGCCCTGTCGGAGTCAATCAATGTCCTATAGCGCCAGGCAATTCATTCTTGTATGA TTTTAATGTCCCAGATCAAGCAGGAACATTCTGGTATCATTCACACTATTGTAAGTTGACTTATCTTACTACACT ACATCACTTAATCATGGGACATGATCAAGCTACGCAATACTGTGATGGACTCCGTGGTGCATTTGTCGTTCGCGA CCCCAATGATCCTCATGCTTCTTTGTGAGTGTATTTTAATACGATAAATTGTTTTCTTCTTTTCTGATGTGAATG TCGTTAGATATGATGTAGACAATGGTCGGTCGCCTATCCCAAAATAAGTCTCGTTTATACAAAGTAACTGACAAT TTTGCAGATGATACCGTAATCACACTTGCCGATTGGTGCGTAAAAGCCTCGCCATAGTTACTCAAAATTCATGGA AATTTCTAGGTACCACACTTCAGCGAAAGAACTTTCTGGGTCGTTCCCCGCAGAAGAGGCCACCCTTATCAACGG CCTTGGCCGTTACTCAGGAGGCCCGACATCCCCGTTGGCTATTGTTAACGTTGAAGCAGGGAAGAGGTATCGGTT CCGTCTTGTGTCTATTTCTTGCGATCCGTTTTATACCTTTTCCATCGATGGACATGACCTGGTTAGTCCTACCCC TACGCAAAGACATTGAATCAATTACTAATTAGATATAGACTATCATTGAAGCCGATGGAGAAAATACTGACCCTC TGGTCGTCGATTACCTTGAAATCTATGCCGGGCAACGCTACTCTGTCGTCTTGAACGCAAACCAGCCTGTCGATA ACTATTGGATTCGTGCTAATTCAAGCAATGGTCCAAGAGACTTCGTGGGCGGAACTAACTCTGCCATTCTTCGCT ATGCAGGCGCATCCAATTCCGACCCCACCACTGAACTCGGGCCTCGCAATAACCGTTTGGTCGAGAATAACCTCC ACGCTCTCGGAAGTCCTGGTGTACCGGGGACTCACACCATCGGAGAGGCTGATGTCAATATCAACCTCGAAATTC TTTTCACCCCTCCGAACGTTTTGACAGTAAATGGCGCGCAATTCATTCCCCCTACTGCCCCTGTTCTTCTTCAAA TCCTAAGTGGCACAAAGCAAGCAACCGATCTCCTACCTCCCGGGAGTGTATATGTCCTCCCGCGGAATGCTGTTG TTGAGTTAACTATCCCTGGTGGATCCGGTGGAAGCCCCGTGAGTGTTTTTTTTTGAAAATACCAGGTGACGCTGA CTGATGTTCTCTCTCTTGTGATAGCATCCTATGCATTTGCATGGCGTACGTGATTTTTTCCATTTGTATTATGCT CTACTTGACATTTTTATATAGCATGTCTTCGATGTTGTTCGAAGTGCTGGTAGTGATACGATCAATTGGGACAAT CCTGTCCGCCGTGATGTCGTCAATATCGGGACATCGACTTCCGACAATGCTACTATCCGCTTTACTACCGACAAT CCTGGCCCTTGGATTTTCCACTGGTATGTGATTTTCATTCCGCTACGAACGACATGTATACTGATGCGATATTGA TTGATCCATAGCCACATTGACTGGCACTTGGAAGTGTAAGTCCACTGTTATTGAATAAGGCTTGATCTGATTCGC GCCTCGATTAGTGGCTTAGCTGTCGTGTTTGCCGAAGATCCTGATACAATCGAAAATTCTACGCATCCCGGTAAC GAGATTCCCTAAACTTATTCATGAGCTTTTCGCTGAATCCGTTACAGCTGCTTGGGACGAGCTTTGCCCAATCTA TGATAACCTGCCCTCCGATGAGCTCTGA |