Fungal Genomics

General Properties

Protein ID	Agabi119p4|594150
Gene name
Location	scaffold_02:3122568..3123190
Strand	-
Gene length (bp)	622
Transcript length (bp)	405
Coding sequence length (bp)	405
Protein length (aa)	135

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp|P83811|CAP_COPCM	Antiviral protein CAP (Fragment) OS=Coprinus comatus PE=1 SV=1	37	126	2.0E-08

GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

SignalP signal predicted	Location	Score
Yes	1 - 17	0.999745

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID	5
Orthogroup	7853
Change Orthofinder run	5: Agaricus - all strains

Species	Protein ID
Agaricus bisporus var bisporus H39	AgabiH39|052110
Agaricus bisporus var bisporus H97	AgabiH97|052110
Agaricus bisporus var burnettii H119p4	Agabi119p4|594150 (this protein)

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Agabi119p4|594150 MFSKYLVASTLIAVAVAQAPLQCYQGLPTSAGPATDCSRFVNTFCDAAAAVPAVRINDSVSRCFNLPDAKVCDFI AWNTFTRNVPPSAANCKSVLNRVISQCVLGGYGQAGANAYTFTVDVNHGQCGHDVHGGS*
Coding	>Agabi119p4|594150 ATGTTTTCCAAATATCTTGTTGCATCTACTCTCATCGCTGTTGCGGTGGCTCAAGCACCTCTCCAGTGCTACCAA GGCTTACCCACTTCTGCGGGTCCCGCAACTGACTGTTCCCGATTTGTGAACACCTTTTGCGACGCGGCTGCCGCT GTCCCTGCGGTACGCATTAACGATTCAGTCAGTCGTTGCTTCAATTTACCAGATGCCAAAGTTTGCGATTTCATT GCATGGAACACATTCACGCGCAATGTTCCGCCTTCAGCGGCTAATTGCAAATCCGTGCTGAACAGAGTTATTTCT CAATGCGTATTGGGAGGTTATGGACAGGCTGGGGCCAATGCGTATACTTTCACGGTTGACGTCAACCATGGACAG TGTGGCCATGATGTCCATGGTGGATCCTAG
Transcript	>Agabi119p4|594150 ATGTTTTCCAAATATCTTGTTGCATCTACTCTCATCGCTGTTGCGGTGGCTCAAGCACCTCTCCAGTGCTACCAA GGCTTACCCACTTCTGCGGGTCCCGCAACTGACTGTTCCCGATTTGTGAACACCTTTTGCGACGCGGCTGCCGCT GTCCCTGCGGTACGCATTAACGATTCAGTCAGTCGTTGCTTCAATTTACCAGATGCCAAAGTTTGCGATTTCATT GCATGGAACACATTCACGCGCAATGTTCCGCCTTCAGCGGCTAATTGCAAATCCGTGCTGAACAGAGTTATTTCT CAATGCGTATTGGGAGGTTATGGACAGGCTGGGGCCAATGCGTATACTTTCACGGTTGACGTCAACCATGGACAG TGTGGCCATGATGTCCATGGTGGATCCTAG
Gene	>Agabi119p4|594150 ATGTTTTCCAAAGTCGTATTTTCTAAGATGATGGTCAATGCTCAACCTACTAATCATGGGCATTTATAGTATCTT GTTGCATCTACTCTCATCGCTGTTGCGGTGGCTCAAGCACCTCTCCAGTGCTACCAAGGCTTACCCACTTCTGCG GGTCCCGCAACTGACTGTTCCCGATTTGTGAACACCTTTTGCGACGCGGCTGCCGCTGTCCCTGCGGTAAGTCAG CATTTCCCGAAGCTGCCCGGCCATTTTTTGATGTTCTCCTCTAGGTACGCATTAACGATTCAGTCAGTCGTTGCT TCAATTTACCAGATGCCAAAGTTTGTGAGTATGCATGACATCCCTCAATGTATCAGATACTGCATGACATATATA GGCGATTTCATTGCATGGAACACATTCACGCGCAATGTTCCGCCTTCAGCGGCTAATTGCAAATCCGTGCTGAAC AGAGTTATTTCTCAATGCGTATTGGTAAAATTCATGCGCTCAAATTCTCGCTGCCGGAGTTGGCTGACGACAAAT CTAGGGAGGTTATGGACAGGCTGGGGCCAATGCGTATACTTTCACGGTTGACGTCAACCATGGACAGTGTGGCCA TGATGTCCATGGTGGATCCTAG