Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|592350
Gene name
Locationscaffold_02:2996465..2997286
Strand+
Gene length (bp)821
Transcript length (bp)711
Coding sequence length (bp)711
Protein length (aa) 237

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05730 CFEM CFEM domain 1.4E-06 84 146

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 23 0.45

Transmembrane Domains

Domain # Start End Length
1 212 234 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|592350
MRLSSSHILFLTLVYYLSLTWAQTLIPPSSLPDVSTSGSMTSGSSPAGGSATLTSSSSISSASSGSGSGSVSATR
TSSAQFPSLSGISACVNTCLATSVADVNCDDLVGVDCWCPNARFPLTYFNCVANGCTSELSTAENLVQQFCRQSN
ATLSATSVSFPSFPMSSSQSVSATMTTQSSGTSSGASSDNDSPPAATSSSAASSIGLNTDAYTTMGSFFVLMMTA
VACGFLNGVEL*
Coding >Agabi119p4|592350
ATGCGTCTCTCTTCCTCGCATATCCTCTTTCTGACTCTGGTTTATTATCTATCCCTCACATGGGCACAAACTCTG
ATTCCACCATCAAGTTTACCTGACGTTTCGACTTCCGGATCTATGACATCGGGCTCTTCTCCGGCTGGTGGTAGT
GCTACGCTAACCAGTAGTAGCAGTATTTCAAGCGCTAGCTCTGGGAGTGGAAGCGGAAGCGTATCTGCAACTAGG
ACGAGTTCGGCTCAGTTTCCAAGTTTGAGTGGTATTTCTGCCTGCGTGAACACTTGCTTGGCGACTTCAGTTGCG
GATGTCAACTGTGATGATCTCGTCGGTGTAGATTGTTGGTGTCCTAATGCCAGATTCCCATTAACGTATTTCAAT
TGTGTTGCCAACGGCTGCACTTCCGAACTCTCCACAGCAGAAAACCTGGTTCAACAATTCTGTAGGCAGTCAAAC
GCTACATTATCAGCCACATCCGTATCATTCCCATCTTTTCCAATGTCAAGCTCGCAAAGTGTTTCTGCCACGATG
ACTACTCAGTCATCAGGAACTTCTTCGGGAGCTTCATCGGATAATGACAGTCCTCCTGCTGCTACTAGTTCCAGT
GCCGCTTCTTCAATTGGATTGAATACCGATGCATATACCACAATGGGATCTTTCTTTGTGTTGATGATGACGGCT
GTTGCATGTGGATTTCTGAATGGCGTGGAATTGTAG
Transcript >Agabi119p4|592350
ATGCGTCTCTCTTCCTCGCATATCCTCTTTCTGACTCTGGTTTATTATCTATCCCTCACATGGGCACAAACTCTG
ATTCCACCATCAAGTTTACCTGACGTTTCGACTTCCGGATCTATGACATCGGGCTCTTCTCCGGCTGGTGGTAGT
GCTACGCTAACCAGTAGTAGCAGTATTTCAAGCGCTAGCTCTGGGAGTGGAAGCGGAAGCGTATCTGCAACTAGG
ACGAGTTCGGCTCAGTTTCCAAGTTTGAGTGGTATTTCTGCCTGCGTGAACACTTGCTTGGCGACTTCAGTTGCG
GATGTCAACTGTGATGATCTCGTCGGTGTAGATTGTTGGTGTCCTAATGCCAGATTCCCATTAACGTATTTCAAT
TGTGTTGCCAACGGCTGCACTTCCGAACTCTCCACAGCAGAAAACCTGGTTCAACAATTCTGTAGGCAGTCAAAC
GCTACATTATCAGCCACATCCGTATCATTCCCATCTTTTCCAATGTCAAGCTCGCAAAGTGTTTCTGCCACGATG
ACTACTCAGTCATCAGGAACTTCTTCGGGAGCTTCATCGGATAATGACAGTCCTCCTGCTGCTACTAGTTCCAGT
GCCGCTTCTTCAATTGGATTGAATACCGATGCATATACCACAATGGGATCTTTCTTTGTGTTGATGATGACGGCT
GTTGCATGTGGATTTCTGAATGGCGTGGAATTGTAG
Gene >Agabi119p4|592350
ATGCGTCTCTCTTCCTCGCATATCCTCTTTCTGACTCTGGTTTATTATCTATCCCTCACATGGGCACAAACTCTG
ATTCCACCATCAAGTTTACCTGACGTTTCGACTTCCGGATCTATGACATCGGGCTCTTCTCCGGCTGGTGGTAGT
GCTACGCTAACCAGTAGTAGCAGTATTTCAAGCGCTAGCTCTGGGAGTGGAAGCGGAAGCGTATCTGCAACTAGG
ACGAGTTCGGCTCAGTTTCCAAGTTTGAGTGGTATTTCTGCCTGCGGTGCGTCCTGATACAGTTGACTGCCTTTT
ATTCTATATAAAAACTCCGCTAGTGAACACTTGCTTGGCGACTTCAGTTGCGGATGTCAACTGTGATGATCTCGT
CGGTGTAGATTGTTGGTGTCCTAAGTAATATCCCCTCCTCAGAAACCTTCTAATTATCTTTACTAACGAAAGAAA
AATTTAGTGCCAGATTCCCATTAACGTATTTCAATTGTGTTGCCAACGGCTGCACTTCCGAACTCTCCACAGCAG
AAAACCTGGTTCAACAATTCTGTAGGCAGTCAAACGCTACATTATCAGCCACATCCGTATCATTCCCATCTTTTC
CAATGTCAAGCTCGCAAAGTGTTTCTGCCACGATGACTACTCAGTCATCAGGAACTTCTTCGGGAGCTTCATCGG
ATAATGACAGTCCTCCTGCTGCTACTAGTTCCAGTGCCGCTTCTTCAATTGGATTGAATACCGATGCATATACCA
CAATGGGATCTTTCTTTGTGTTGATGATGACGGCTGTTGCATGTGGATTTCTGAATGGCGTGGAATTGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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