Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|591900
Gene name
Locationscaffold_02:2969902..2970622
Strand+
Gene length (bp)720
Transcript length (bp)720
Coding sequence length (bp)720
Protein length (aa) 240

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01965 DJ-1_PfpI DJ-1/PfpI family 1.7E-10 50 196

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q8G9F9|INHA_PSEPU Isonitrile hydratase OS=Pseudomonas putida GN=inhA PE=1 SV=1 12 218 4.0E-14

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 28 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|591900
MSNHESLAGKTIHIALVLLPSYQYLDAAAPVDYINCHSKAMLTALGVSENLIAKATEMHWYYIAESAGEPVHASS
GPAQIPTHSYKNPPPHLDYIIVPGADPKVPLSSDCAHFFKTYVPKLRALLTVCTGSLCIAPTGVLDGHSVCSNKF
ILRQLALAKELPKGINWVGDRRWIVDGKMWTGGGITAGLDLAAEFARRHFDPDIVELVKEVSEETPKPDVPDDWA
KITEGLGLTSTKAT*
Coding >Agabi119p4|591900
ATGTCCAACCACGAGTCCTTGGCTGGGAAGACGATCCACATTGCACTTGTCCTACTACCCTCATACCAGTACCTC
GATGCCGCAGCACCCGTTGACTACATCAATTGTCACTCCAAAGCCATGCTTACTGCGCTTGGTGTCTCTGAAAAC
CTTATAGCTAAAGCGACGGAGATGCACTGGTACTACATCGCCGAATCAGCCGGTGAACCCGTTCACGCATCATCC
GGGCCCGCCCAAATCCCGACTCACTCTTACAAAAACCCTCCACCTCATCTTGACTACATCATCGTTCCCGGAGCA
GACCCCAAGGTTCCCCTCTCTTCTGACTGCGCCCATTTCTTCAAAACCTACGTCCCAAAACTTCGAGCTTTATTG
ACGGTCTGCACCGGCTCTCTTTGCATTGCACCCACAGGAGTCCTGGACGGTCATAGCGTATGCTCGAACAAATTC
ATCCTACGACAGCTCGCTTTAGCCAAGGAACTACCCAAGGGCATCAATTGGGTCGGAGACAGGAGGTGGATTGTA
GATGGAAAGATGTGGACTGGAGGAGGAATTACGGCAGGTCTGGATTTAGCAGCGGAGTTTGCTAGGAGACACTTC
GATCCCGATATCGTGGAACTAGTCAAAGAGGTTAGCGAAGAGACGCCGAAACCTGATGTACCAGACGATTGGGCT
AAGATCACGGAGGGGCTCGGGTTGACCAGCACAAAAGCTACTTGA
Transcript >Agabi119p4|591900
ATGTCCAACCACGAGTCCTTGGCTGGGAAGACGATCCACATTGCACTTGTCCTACTACCCTCATACCAGTACCTC
GATGCCGCAGCACCCGTTGACTACATCAATTGTCACTCCAAAGCCATGCTTACTGCGCTTGGTGTCTCTGAAAAC
CTTATAGCTAAAGCGACGGAGATGCACTGGTACTACATCGCCGAATCAGCCGGTGAACCCGTTCACGCATCATCC
GGGCCCGCCCAAATCCCGACTCACTCTTACAAAAACCCTCCACCTCATCTTGACTACATCATCGTTCCCGGAGCA
GACCCCAAGGTTCCCCTCTCTTCTGACTGCGCCCATTTCTTCAAAACCTACGTCCCAAAACTTCGAGCTTTATTG
ACGGTCTGCACCGGCTCTCTTTGCATTGCACCCACAGGAGTCCTGGACGGTCATAGCGTATGCTCGAACAAATTC
ATCCTACGACAGCTCGCTTTAGCCAAGGAACTACCCAAGGGCATCAATTGGGTCGGAGACAGGAGGTGGATTGTA
GATGGAAAGATGTGGACTGGAGGAGGAATTACGGCAGGTCTGGATTTAGCAGCGGAGTTTGCTAGGAGACACTTC
GATCCCGATATCGTGGAACTAGTCAAAGAGGTTAGCGAAGAGACGCCGAAACCTGATGTACCAGACGATTGGGCT
AAGATCACGGAGGGGCTCGGGTTGACCAGCACAAAAGCTACTTGA
Gene >Agabi119p4|591900
ATGTCCAACCACGAGTCCTTGGCTGGGAAGACGATCCACATTGCACTTGTCCTACTACCCTCATACCAGTACCTC
GATGCCGCAGCACCCGTTGACTACATCAATTGTCACTCCAAAGCCATGCTTACTGCGCTTGGTGTCTCTGAAAAC
CTTATAGCTAAAGCGACGGAGATGCACTGGTACTACATCGCCGAATCAGCCGGTGAACCCGTTCACGCATCATCC
GGGCCCGCCCAAATCCCGACTCACTCTTACAAAAACCCTCCACCTCATCTTGACTACATCATCGTTCCCGGAGCA
GACCCCAAGGTTCCCCTCTCTTCTGACTGCGCCCATTTCTTCAAAACCTACGTCCCAAAACTTCGAGCTTTATTG
ACGGTCTGCACCGGCTCTCTTTGCATTGCACCCACAGGAGTCCTGGACGGTCATAGCGTATGCTCGAACAAATTC
ATCCTACGACAGCTCGCTTTAGCCAAGGAACTACCCAAGGGCATCAATTGGGTCGGAGACAGGAGGTGGATTGTA
GATGGAAAGATGTGGACTGGAGGAGGAATTACGGCAGGTCTGGATTTAGCAGCGGAGTTTGCTAGGAGACACTTC
GATCCCGATATCGTGGAACTAGTCAAAGAGGTTAGCGAAGAGACGCCGAAACCTGATGTACCAGACGATTGGGCT
AAGATCACGGAGGGGCTCGGGTTGACCAGCACAAAAGCTACTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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