© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Agabi119p4|586450 |
| Gene name | |
| Location | scaffold_02:2396549..2399554 |
| Strand | - |
| Gene length (bp) | 3005 |
| Transcript length (bp) | 1767 |
| Coding sequence length (bp) | 1767 |
| Protein length (aa) | 589 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF14587 | Glyco_hydr_30_2 | O-Glycosyl hydrolase family 30 | 1.8E-28 | 33 | 341 |
| PF05495 | zf-CHY | CHY zinc finger | 2.6E-12 | 466 | 535 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O43034|YGU5_SCHPO | Uncharacterized protein C3B9.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC3B9.05 PE=3 SV=2 | 465 | 562 | 2.0E-33 |
| sp|Q76FP5|6GAL_HYPRU | Endo-beta-1,6-galactanase OS=Hypocrea rufa GN=6GAL PE=1 SV=1 | 8 | 302 | 3.0E-08 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0008270 | zinc ion binding | Yes |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | Yes |
| GO:0016787 | hydrolase activity | No |
| GO:0043169 | cation binding | No |
| GO:0043167 | ion binding | No |
| GO:0046872 | metal ion binding | No |
| GO:0003824 | catalytic activity | No |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds | No |
| GO:0046914 | transition metal ion binding | No |
| GO:0005488 | binding | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 26 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Agabi119p4|586450 MVALPSRIIIYTLGLLLVHVTRVTPATISSSPAQTFNGIGGSGAWWPNDLWHFPEATRQNLASLLFSQSGLGLSS YRYNIGAGGVNVSNPTRAPETFFVRNGVYNFDADQQGRYFLNEAAKRGVSSLTAFANSAPPSLTSGGASCNGRFV SGNGDAYGTFLADVISHFHSQGVNISLISPMNEPDSNFGPSPCGQEGMQVLPNQRAEVVNGLWNALQARGLASTV GILADESSSLGSAVNEYSSWLPQVINKVAALVHHTYDFPSDSSYTNYVSNVRNQFPGKLSWMSEICCSLGNADGS GKGWSGGYDPTIKNALMFSSLVFQSLVLANEPHYDFWTLVSNGLGCSPQNNPSCATSPNSNGWNDGLIYYDGNYA RNGNFQLYIKKQFWTYKHFGNFVKPGSQRRAITGSGSTKFMMAVTDSSHFYVIAMNPNSADTTLALTFPESNGSL GHLLAFSRYLGKIEMCKHILNAQVSIRAPCCKQWYDCAECHGESQTHPLAKTAEMAFICKKCKKAFRKNMSEYEE SDEYCPHCDNHYVIEAKTPQAIVGVEGEDARVDNRMLKDDRVKQSTNRSLFTINSDDLTDKVG* |
| Coding | >Agabi119p4|586450 ATGGTTGCTCTACCCAGTCGGATCATTATTTACACACTCGGTCTCCTTTTGGTTCATGTCACTCGCGTGACCCCG GCTACTATTTCATCCAGTCCTGCTCAAACGTTCAATGGTATTGGCGGCTCCGGAGCTTGGTGGCCTAATGATCTG TGGCATTTCCCCGAGGCAACCCGACAAAACCTGGCGTCATTGTTATTTTCTCAAAGTGGGTTAGGACTCTCTAGT TATCGATACAACATCGGTGCTGGAGGTGTGAATGTTTCGAATCCTACCCGAGCGCCAGAGACTTTTTTTGTGCGC AACGGAGTATACAATTTTGATGCGGACCAGCAAGGACGATACTTTTTGAACGAGGCGGCGAAACGGGGAGTTTCG TCATTGACAGCTTTTGCGAATAGCGCACCTCCGAGTTTAACTTCGGGTGGCGCAAGTTGTAACGGACGGTTTGTT AGCGGTAATGGAGACGCTTACGGGACCTTCCTGGCAGATGTCATTAGCCATTTCCACTCTCAAGGCGTAAACATC AGTCTAATTTCACCAATGAATGAGCCTGACAGCAACTTTGGACCTTCGCCTTGTGGACAGGAGGGAATGCAGGTT CTTCCTAACCAGCGAGCTGAAGTTGTCAATGGGTTGTGGAATGCGCTCCAGGCCCGTGGTTTGGCTTCGACGGTT GGGATACTTGCCGATGAATCTTCATCCTTAGGAAGTGCAGTAAACGAGTATTCTTCTTGGTTGCCCCAAGTCATT AACAAAGTTGCGGCACTGGTCCATCATACCTACGACTTCCCAAGCGACTCCAGTTACACGAACTACGTCTCCAAT GTTCGAAATCAATTTCCCGGAAAATTAAGTTGGATGTCGGAAATTTGCTGCTCTCTTGGTAACGCTGATGGATCT GGGAAAGGTTGGTCCGGAGGATATGATCCCACCATCAAAAACGCTTTAATGTTCTCCAGTCTTGTCTTCCAAAGC CTTGTCTTGGCTAACGAACCTCATTATGATTTCTGGACTCTGGTTTCCAATGGACTTGGTTGTTCTCCACAAAAT AACCCCTCTTGTGCCACTTCTCCCAATTCCAATGGCTGGAATGACGGTTTGATATATTACGATGGTAATTATGCA AGGAATGGGAACTTCCAACTTTATATCAAAAAGCAATTCTGGACGTACAAGCATTTCGGCAATTTCGTTAAACCT GGTTCACAACGACGTGCGATCACCGGCTCAGGTTCAACGAAGTTTATGATGGCAGTGACAGACTCATCCCACTTT TATGTCATCGCCATGAACCCGAACAGCGCCGATACAACATTGGCACTTACATTCCCAGAAAGTAACGGTTCACTT GGACATTTGCTAGCCTTTTCACGATACTTGGGCAAGATAGAGATGTGTAAACACATCCTCAACGCTCAAGTATCC ATCCGCGCACCCTGCTGCAAGCAGTGGTACGATTGCGCCGAGTGCCATGGAGAATCACAAACACATCCCTTGGCA AAAACTGCTGAAATGGCTTTCATCTGCAAGAAATGTAAAAAGGCATTCAGGAAGAATATGTCAGAGTACGAAGAG AGTGATGAATATTGTCCGCATTGCGATAATCACTACGTGATCGAGGCCAAGACGCCGCAGGCCATTGTGGGTGTG GAAGGAGAGGATGCGAGGGTCGATAACAGAATGTTGAAGGATGACCGGGTGAAACAGTCGACGAATCGCTCGTTG TTTACGATTAACTCAGACGACCTGACCGATAAAGTAGGATAA |
| Transcript | >Agabi119p4|586450 ATGGTTGCTCTACCCAGTCGGATCATTATTTACACACTCGGTCTCCTTTTGGTTCATGTCACTCGCGTGACCCCG GCTACTATTTCATCCAGTCCTGCTCAAACGTTCAATGGTATTGGCGGCTCCGGAGCTTGGTGGCCTAATGATCTG TGGCATTTCCCCGAGGCAACCCGACAAAACCTGGCGTCATTGTTATTTTCTCAAAGTGGGTTAGGACTCTCTAGT TATCGATACAACATCGGTGCTGGAGGTGTGAATGTTTCGAATCCTACCCGAGCGCCAGAGACTTTTTTTGTGCGC AACGGAGTATACAATTTTGATGCGGACCAGCAAGGACGATACTTTTTGAACGAGGCGGCGAAACGGGGAGTTTCG TCATTGACAGCTTTTGCGAATAGCGCACCTCCGAGTTTAACTTCGGGTGGCGCAAGTTGTAACGGACGGTTTGTT AGCGGTAATGGAGACGCTTACGGGACCTTCCTGGCAGATGTCATTAGCCATTTCCACTCTCAAGGCGTAAACATC AGTCTAATTTCACCAATGAATGAGCCTGACAGCAACTTTGGACCTTCGCCTTGTGGACAGGAGGGAATGCAGGTT CTTCCTAACCAGCGAGCTGAAGTTGTCAATGGGTTGTGGAATGCGCTCCAGGCCCGTGGTTTGGCTTCGACGGTT GGGATACTTGCCGATGAATCTTCATCCTTAGGAAGTGCAGTAAACGAGTATTCTTCTTGGTTGCCCCAAGTCATT AACAAAGTTGCGGCACTGGTCCATCATACCTACGACTTCCCAAGCGACTCCAGTTACACGAACTACGTCTCCAAT GTTCGAAATCAATTTCCCGGAAAATTAAGTTGGATGTCGGAAATTTGCTGCTCTCTTGGTAACGCTGATGGATCT GGGAAAGGTTGGTCCGGAGGATATGATCCCACCATCAAAAACGCTTTAATGTTCTCCAGTCTTGTCTTCCAAAGC CTTGTCTTGGCTAACGAACCTCATTATGATTTCTGGACTCTGGTTTCCAATGGACTTGGTTGTTCTCCACAAAAT AACCCCTCTTGTGCCACTTCTCCCAATTCCAATGGCTGGAATGACGGTTTGATATATTACGATGGTAATTATGCA AGGAATGGGAACTTCCAACTTTATATCAAAAAGCAATTCTGGACGTACAAGCATTTCGGCAATTTCGTTAAACCT GGTTCACAACGACGTGCGATCACCGGCTCAGGTTCAACGAAGTTTATGATGGCAGTGACAGACTCATCCCACTTT TATGTCATCGCCATGAACCCGAACAGCGCCGATACAACATTGGCACTTACATTCCCAGAAAGTAACGGTTCACTT GGACATTTGCTAGCCTTTTCACGATACTTGGGCAAGATAGAGATGTGTAAACACATCCTCAACGCTCAAGTATCC ATCCGCGCACCCTGCTGCAAGCAGTGGTACGATTGCGCCGAGTGCCATGGAGAATCACAAACACATCCCTTGGCA AAAACTGCTGAAATGGCTTTCATCTGCAAGAAATGTAAAAAGGCATTCAGGAAGAATATGTCAGAGTACGAAGAG AGTGATGAATATTGTCCGCATTGCGATAATCACTACGTGATCGAGGCCAAGACGCCGCAGGCCATTGTGGGTGTG GAAGGAGAGGATGCGAGGGTCGATAACAGAATGTTGAAGGATGACCGGGTGAAACAGTCGACGAATCGCTCGTTG TTTACGATTAACTCAGACGACCTGACCGATAAAGTAGGATAA |
| Gene | >Agabi119p4|586450 ATGGTTGCTCTACCCAGTCGGATCATTATTTACACACTCGGTCTCCTTTTGGTTCATGTCACTCGCGTGACCCCG GCTACTATTTCATCCAGTCCTGCTCAAACGTTCAATGGTATTGGCGGCTCCGGAGCTTGGTGGCCTAATGATCTG TGGCATTTCCCCGAGGCAACCCGACAAAACCTGGCGTCATTGTTATTTTCTCAAAGTGGGTTAGGACTCTCTAGT TATCGATACAACATCGGTGCTGGAGGTGTGAATGTTTCGAATCCTACCCGAGCGCCAGAGACTTTTTTTGTGCGC AACGGAGTATACAATTTTGATGCGGACCAGCAAGGACGATACTTTTTGAACGAGGCGGCGAAACGGGGAGTTTCG TCATTGACAGCTTTTGCGAATAGCGCACCTCCGAGTTTAACTTCGGGTGGCGCAAGTTGTAACGGACGGTTTGTT AGCGGTACGTACCTAGACATGTTCTGGTTCTTTTCTGGTATCGGTTTCAACAACTCATGTTCGCCGGGATTTCAG GTAATGGAGACGCTTACGGGACCTTCCTGGCAGATGTCATTAGCCATTTCCACTCTCAAGGCGTAAACATCAGTC TAATTTCACCAATGAATGAGCCTGACAGCAACTTTGGACCTTCGCCTTGTGGACAGGAGGGAATGCAGGTTCTTC CTAACCAGTAAGAATTGACTCTGGCAAGGATTTGACAGTCGGTCATGATAAGCGACATTCTTTACTAGGCGAGCT GAAGTTGTCAATGGGTTGTGGAATGCGCTCCAGGCCCGTGGTTTGGCTTCGACGGTTGGGATACTTGCCGATGAA TCTTCATCCTTAGGAAGTGCAGTAAACGAGTATTCTTCTTGGTTGCCCCAAGTCATTAACAAAGTTGCGGCACTG GTCCATCATACCTACGACTTCCCAAGCGACTCCAGTTACACGAACTACGTCTCCAATGTTCGAAATCAATTTCCC GGAAAATTAAGTTGGATGTCGGTATGTATGATCCATTGCAAGCTGTTCTTGTCTCATCGACGATTCTCAAGGAAA TTTGCTGCTCTCTTGGTAACGCTGATGGATCTGGGAAAGGTTGGTCCGGAGGATATGATCCCACGTATGCAACTT CTATCAGTTTGCGATGATCTAAAGCATCGACGCATGATTGCCTAGCATCAAAAACGCTTTAATGTTCTCCAGTCT TGTCTTCCAAAGCCTTGTCTTGGCTAACGAACCTCATTATGATGTACGTGGCGACATTGACCGCTATATAAAGAC TGAAGTAAGTTTATCCTGATCGACAGTTCTGGACTCTGGTTTCCAATGGTTAGTTTCTTTTTTCGGCCGATATTC TTTCAGCCTCATTCTCATTGCTACTTCACAGGACTTGGTTGTTCTCCACAAAATAACCCCTCTTGTGCCACTTCT CCCAATTCCAATGGCTGGAATGTGAGTATATCAATCACGTTAGTTGGATATAATTATGAACTTCTGTGTCATAGG ACGGTTTGATATATTACGATGGTAATTATGCAAGGAATGGGAACTTCCAACTTTGTACGTTTTACACTTCCTTGC TCGTCCGGTTTATCCTAATCATTCCTTGATAGATATCAAAAAGCAATTCTGGACGTACAAGCATTTCGGCAATTT CGTTAAACGTGAGTTACTTTATATAAATGTGCATTCTGCCTTATAAGTGCGGACCTTTAATCTGTCGAGCTTCAG CTGGTTCACAACGACGTGCGATCACCGGCTCAGGTTCAACGAAGTTTATGATGGCAGTGACAGACTCATCCCACT TTTATGTCATCGCCATGAACCCGAACAGCGCCGATACAACATTGGCACTTACATTCCCAGAAAGTGTATGTGCCA CGGAAGCCCACAGAACGTCCGCAAGCGAAGATTTTGCGACGATTGGAAAGGCTACAGGGGGCGGAAACAATTGGT CTCTTCCTTTGAGAGCGAACAGCTTGAGCACATATATATTCAACAGAAGAGCTTGCTAGTTAGTGTATGTTGATA ATTTCGAAGAATGAATTTAATGTCAATCTGATCGACCGGTTGATGTGTGAGTGATAGCGGGGATTTTCGTTCGAT CATTTACGAGGACGCGGAGATTCAAGGAGATCCTGTGAAAATTCGGGGCTTTGACGGTCGACTGTTTTCGGGGCG TCCTACTAAGTGACCGCCAGCCGTCTTTTGCCCAAGGGAATTTATTTTGGGCTACTACAAGTACGGTTATTTGGT CGGCGAATGTCTAGAAAATGGAAGATCGTTGGTTGGGATAGTACAATCGTTTAACGAAGGCAGCCTGTTCGGAGC AGGAAGACAAATGATTAAGCGTGACTGTGTGACACTACTTCTCAAATTATGCACTTGTCGGTAAATTCACTTTCA GAACGGTTCACTTGGACATTTGCTAGCCTTTTCACGATACTTGGGCAAGATAGAGATGTGGTATGTCAAACCGTT ATCATATTGTCCTATAGCTTTATACTGAACACCCTTCACTCACAAAAGTAAACACATCCTCAACGCTCAAGTATC CATCCGCGCACCCTGCTGCAAGCAGTGGTACGATTGCGCCGAGTGCCATGGAGAATCACAAACACATCCCTTGGC AAAAACTGCTGAAATGGCTTTCATCTGCAAGAAATGTAAAAAGGCATTCAGGAAGAATATGTCAGAGTACGAAGA GAGTGATGAATATTGTCCGCATTGCGATAATCACTACGTGCGTCTTCATCTTTCGATTAGATCGTGAAAGTCAAC GTGTCATTTTTTTCAGGTGATCGAGGCCAAGACGCCGCAGGCCATTGTGGGTGTGGAAGGAGAGGATGCGAGGGT CGATAACAGGTAGGTTCTATCCTAGTATTCTGGCCTGTACGGAACTTCAGCTGAGGCACTTGTGTAGAATGTTGA AGGATGACCGGGTGAAACAGTCGACGAATCGCTCGTTGTTTACGATTAACTCAGACGACCTGACCGATAAAGTAG GATAA |