Protein ID | Agabi119p4|584000 |
Gene name | |
Location | scaffold_02:1783376..1787023 |
Strand | + |
Gene length (bp) | 3647 |
Transcript length (bp) | 2772 |
Coding sequence length (bp) | 2772 |
Protein length (aa) | 924 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF09451 | ATG27 | Autophagy-related protein 27 | 1.2E-59 | 659 | 919 |
PF17389 | Bac_rhamnosid6H | Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain | 3.9E-12 | 244 | 464 |
PF17390 | Bac_rhamnosid_C | Bacterial alpha-L-rhamnosidase C-terminal domain | 2.1E-05 | 567 | 624 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q6CBS9|ATG27_YARLI | Autophagy-related protein 27 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=ATG27 PE=3 SV=1 | 659 | 923 | 2.0E-21 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 18 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 851 | 873 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Agabi119p4|584000 MLTSFIAVVLIAADAFGLAPHGPWDQFNFAPESRISRPTQIHSIQGNVQNADALISSGTANFNGNSSFVTLDFGL EVGGRVFFDVVHSTGDARLSLSFTESAEFISPLNSDDSCHSVFTMDGDGVQSLPVPLSTGKFMQTISQQRGGFRF MTIVSHSDGQIGIAGVGVENTFMPHWDDLRAYTGYFFTKDPNFHDPDFLTKLWYAGAYTVQTNTIDANQARQQPC PSPKGWDNNASGGPVEGPILVDGAKRDRNIWPGDMGISSHTELVALNDILPSKNALLVMFSTQDPATGSLQYSGP PINAKGSDTYIAWSLIGTHNVWLYTGDIDFVHDVWSNFTKALAFLESQVDETGLMDVPQAFSNDWGRDGGQGHNI AANVLLYRSLVTGSELARQIGDAHLSKAYAANATTLKRDINDLLWDSTAEMFRDNDSSDLLPQDGNAMAVLFNVT QNQEQVKAISKGLTQFWTDIGPLSPELNDTIIPFVGGFEVQAHFIAGEGERALDLLHQVQSTLLEGFTANGSLGY RAAAGYDFDHSYTSHSHGWATGPTPAMTFHILGIGITSPQGKTWSISPVLSGLQSAEGGLETGLGWFGVKWEVSD SMLSVAVSTPLGTSGTVRLPGEGPVTVDGIVQTGINVDFALFLSLDAQRQLFLANGWTLAEEQAAFDCHVSTEGA NFDLTGLSGEHTLNRTRNTPPTKMVDSLRFNLCSDLKPQEDVAEGDQCPKGARACLTSVNQKSQESDRIISVITL AMASSTRSVTAGLSDPKFISILFAGPEYSSPSESTPTKQFLNVTVHCDPNSKSDPIFLSYDDSLLALEWRAPGGC PSEQSPEPPKDHDDKDDPKEENVGSGLGWFFLVILLAFVAYFGLGAYYNYSTYGARGKDLIPHRDFWQEVPYMLK DVISHLCSSVHPRRSSRGGYVAV* |
Coding | >Agabi119p4|584000 ATGCTCACGTCTTTCATAGCAGTTGTGCTCATTGCGGCCGACGCATTTGGATTAGCTCCTCATGGACCATGGGAT CAATTCAACTTCGCACCTGAGAGTAGGATCAGCCGTCCAACTCAAATCCATTCTATTCAGGGCAATGTACAGAAT GCAGATGCTCTGATCAGTTCAGGAACAGCAAATTTCAATGGAAACAGCAGTTTCGTTACCTTGGATTTCGGCCTA GAGGTTGGCGGCCGTGTTTTCTTTGACGTCGTCCATTCAACCGGAGATGCTCGCCTTTCTCTTTCCTTTACAGAA TCGGCTGAATTCATCAGTCCTCTCAACTCAGATGATTCGTGTCATTCCGTCTTTACAATGGACGGCGATGGTGTC CAATCTCTCCCGGTACCCCTTAGCACAGGGAAATTTATGCAGACTATAAGCCAACAGCGTGGCGGGTTCCGTTTC ATGACCATCGTAAGCCACTCCGATGGCCAGATTGGCATCGCTGGAGTAGGCGTCGAAAATACATTCATGCCACAT TGGGACGACTTGCGAGCGTATACTGGGTACTTCTTCACTAAAGATCCCAATTTCCATGATCCGGATTTTCTAACC AAATTGTGGTACGCTGGAGCATATACAGTCCAGACCAACACCATCGATGCGAACCAAGCTCGGCAGCAGCCTTGT CCAAGCCCGAAGGGGTGGGACAACAACGCAAGCGGTGGACCAGTTGAAGGACCAATTCTGGTAGATGGTGCAAAG CGTGATCGAAATATATGGCCTGGTGATATGGGCATATCCAGCCACACGGAGCTTGTGGCTCTGAATGACATCCTT CCAAGCAAGAACGCGCTTCTCGTCATGTTTTCTACACAGGATCCGGCAACAGGGTCATTACAATATTCTGGTCCA CCTATCAATGCAAAAGGTAGTGACACATATATTGCTTGGTCCTTGATTGGAACACATAATGTCTGGTTGTACACC GGAGACATTGACTTCGTCCATGACGTCTGGAGTAATTTTACGAAGGCGCTTGCATTCCTGGAAAGTCAAGTTGAT GAAACTGGATTGATGGATGTCCCACAAGCGTTTTCCAATGACTGGGGGAGAGACGGAGGACAAGGACATAATATT GCGGCAAACGTTTTGCTTTATAGGTCTCTTGTAACAGGTTCGGAGTTAGCCCGCCAAATAGGAGATGCCCATTTG TCGAAAGCATATGCGGCAAATGCAACGACATTGAAAAGAGATATTAATGATCTGCTTTGGGACAGCACGGCTGAG ATGTTCCGTGACAACGACTCGTCGGATCTCCTTCCACAAGATGGAAATGCTATGGCAGTCCTGTTTAACGTTACA CAAAACCAAGAGCAGGTAAAGGCAATTAGCAAAGGCTTGACTCAATTCTGGACAGATATCGGTCCACTGAGTCCC GAGCTCAATGATACGATCATCCCTTTCGTTGGGGGTTTCGAGGTACAAGCGCATTTTATTGCAGGTGAAGGTGAA AGGGCTCTTGATTTACTACACCAAGTGCAATCCACCCTGCTTGAGGGATTCACCGCCAACGGTTCATTGGGATAT CGCGCAGCAGCAGGCTACGACTTTGATCATTCATACACGAGCCATAGCCACGGCTGGGCAACAGGTCCGACTCCG GCTATGACGTTCCATATCCTCGGAATTGGAATAACGTCTCCTCAAGGAAAAACCTGGAGCATAAGTCCTGTCCTG AGTGGGCTTCAATCTGCTGAGGGAGGCCTAGAAACGGGGCTCGGATGGTTTGGAGTGAAGTGGGAAGTGAGCGAC AGTATGCTGAGTGTGGCGGTCTCAACCCCACTTGGAACATCGGGGACGGTGAGGCTGCCTGGGGAGGGGCCGGTG ACGGTGGACGGAATAGTACAGACAGGAATCAATGTCGACTTTGCTCTGTTCTTGAGTCTCGACGCTCAACGTCAA CTCTTCCTTGCTAATGGCTGGACCTTGGCAGAGGAACAGGCTGCATTTGATTGTCATGTCTCCACTGAGGGCGCA AACTTTGATTTGACAGGGCTCTCTGGCGAGCATACGTTAAACCGGACAAGGAACACACCGCCAACGAAGATGGTG GATTCCCTGCGGTTCAATCTCTGCTCAGACCTCAAACCCCAGGAGGACGTTGCGGAAGGCGACCAATGTCCTAAA GGAGCCCGTGCTTGTTTGACTAGTGTGAATCAGAAATCTCAAGAATCCGATCGTATAATTTCAGTCATCACTCTT GCAATGGCTTCCTCTACACGCTCCGTAACCGCTGGACTGTCTGATCCCAAATTCATCTCTATCTTGTTTGCCGGC CCCGAGTACTCGTCACCCTCTGAGTCCACTCCAACAAAACAGTTTCTGAACGTCACGGTACATTGTGACCCGAAT TCAAAGTCTGATCCCATTTTTCTCTCCTACGACGACTCGTTGCTCGCTTTAGAATGGCGGGCGCCCGGTGGTTGT CCATCCGAACAAAGTCCAGAGCCTCCGAAAGACCATGATGACAAGGATGATCCTAAGGAAGAGAATGTAGGCAGT GGGCTGGGATGGTTCTTCTTGGTAATACTCTTGGCATTCGTGGCTTATTTTGGTCTGGGAGCTTACTATAACTAT TCGACATATGGTGCTAGAGGCAAAGACCTTATTCCACACCGAGATTTCTGGCAGGAAGTGCCCTATATGCTCAAG GACGTTATCTCCCATCTTTGTTCGTCAGTGCATCCACGGCGATCGTCCAGAGGGGGCTATGTTGCTGTATGA |
Transcript | >Agabi119p4|584000 ATGCTCACGTCTTTCATAGCAGTTGTGCTCATTGCGGCCGACGCATTTGGATTAGCTCCTCATGGACCATGGGAT CAATTCAACTTCGCACCTGAGAGTAGGATCAGCCGTCCAACTCAAATCCATTCTATTCAGGGCAATGTACAGAAT GCAGATGCTCTGATCAGTTCAGGAACAGCAAATTTCAATGGAAACAGCAGTTTCGTTACCTTGGATTTCGGCCTA GAGGTTGGCGGCCGTGTTTTCTTTGACGTCGTCCATTCAACCGGAGATGCTCGCCTTTCTCTTTCCTTTACAGAA TCGGCTGAATTCATCAGTCCTCTCAACTCAGATGATTCGTGTCATTCCGTCTTTACAATGGACGGCGATGGTGTC CAATCTCTCCCGGTACCCCTTAGCACAGGGAAATTTATGCAGACTATAAGCCAACAGCGTGGCGGGTTCCGTTTC ATGACCATCGTAAGCCACTCCGATGGCCAGATTGGCATCGCTGGAGTAGGCGTCGAAAATACATTCATGCCACAT TGGGACGACTTGCGAGCGTATACTGGGTACTTCTTCACTAAAGATCCCAATTTCCATGATCCGGATTTTCTAACC AAATTGTGGTACGCTGGAGCATATACAGTCCAGACCAACACCATCGATGCGAACCAAGCTCGGCAGCAGCCTTGT CCAAGCCCGAAGGGGTGGGACAACAACGCAAGCGGTGGACCAGTTGAAGGACCAATTCTGGTAGATGGTGCAAAG CGTGATCGAAATATATGGCCTGGTGATATGGGCATATCCAGCCACACGGAGCTTGTGGCTCTGAATGACATCCTT CCAAGCAAGAACGCGCTTCTCGTCATGTTTTCTACACAGGATCCGGCAACAGGGTCATTACAATATTCTGGTCCA CCTATCAATGCAAAAGGTAGTGACACATATATTGCTTGGTCCTTGATTGGAACACATAATGTCTGGTTGTACACC GGAGACATTGACTTCGTCCATGACGTCTGGAGTAATTTTACGAAGGCGCTTGCATTCCTGGAAAGTCAAGTTGAT GAAACTGGATTGATGGATGTCCCACAAGCGTTTTCCAATGACTGGGGGAGAGACGGAGGACAAGGACATAATATT GCGGCAAACGTTTTGCTTTATAGGTCTCTTGTAACAGGTTCGGAGTTAGCCCGCCAAATAGGAGATGCCCATTTG TCGAAAGCATATGCGGCAAATGCAACGACATTGAAAAGAGATATTAATGATCTGCTTTGGGACAGCACGGCTGAG ATGTTCCGTGACAACGACTCGTCGGATCTCCTTCCACAAGATGGAAATGCTATGGCAGTCCTGTTTAACGTTACA CAAAACCAAGAGCAGGTAAAGGCAATTAGCAAAGGCTTGACTCAATTCTGGACAGATATCGGTCCACTGAGTCCC GAGCTCAATGATACGATCATCCCTTTCGTTGGGGGTTTCGAGGTACAAGCGCATTTTATTGCAGGTGAAGGTGAA AGGGCTCTTGATTTACTACACCAAGTGCAATCCACCCTGCTTGAGGGATTCACCGCCAACGGTTCATTGGGATAT CGCGCAGCAGCAGGCTACGACTTTGATCATTCATACACGAGCCATAGCCACGGCTGGGCAACAGGTCCGACTCCG GCTATGACGTTCCATATCCTCGGAATTGGAATAACGTCTCCTCAAGGAAAAACCTGGAGCATAAGTCCTGTCCTG AGTGGGCTTCAATCTGCTGAGGGAGGCCTAGAAACGGGGCTCGGATGGTTTGGAGTGAAGTGGGAAGTGAGCGAC AGTATGCTGAGTGTGGCGGTCTCAACCCCACTTGGAACATCGGGGACGGTGAGGCTGCCTGGGGAGGGGCCGGTG ACGGTGGACGGAATAGTACAGACAGGAATCAATGTCGACTTTGCTCTGTTCTTGAGTCTCGACGCTCAACGTCAA CTCTTCCTTGCTAATGGCTGGACCTTGGCAGAGGAACAGGCTGCATTTGATTGTCATGTCTCCACTGAGGGCGCA AACTTTGATTTGACAGGGCTCTCTGGCGAGCATACGTTAAACCGGACAAGGAACACACCGCCAACGAAGATGGTG GATTCCCTGCGGTTCAATCTCTGCTCAGACCTCAAACCCCAGGAGGACGTTGCGGAAGGCGACCAATGTCCTAAA GGAGCCCGTGCTTGTTTGACTAGTGTGAATCAGAAATCTCAAGAATCCGATCGTATAATTTCAGTCATCACTCTT GCAATGGCTTCCTCTACACGCTCCGTAACCGCTGGACTGTCTGATCCCAAATTCATCTCTATCTTGTTTGCCGGC CCCGAGTACTCGTCACCCTCTGAGTCCACTCCAACAAAACAGTTTCTGAACGTCACGGTACATTGTGACCCGAAT TCAAAGTCTGATCCCATTTTTCTCTCCTACGACGACTCGTTGCTCGCTTTAGAATGGCGGGCGCCCGGTGGTTGT CCATCCGAACAAAGTCCAGAGCCTCCGAAAGACCATGATGACAAGGATGATCCTAAGGAAGAGAATGTAGGCAGT GGGCTGGGATGGTTCTTCTTGGTAATACTCTTGGCATTCGTGGCTTATTTTGGTCTGGGAGCTTACTATAACTAT TCGACATATGGTGCTAGAGGCAAAGACCTTATTCCACACCGAGATTTCTGGCAGGAAGTGCCCTATATGCTCAAG GACGTTATCTCCCATCTTTGTTCGTCAGTGCATCCACGGCGATCGTCCAGAGGGGGCTATGTTGCTGTATGA |
Gene | >Agabi119p4|584000 ATGCTCACGTCTTTCATAGCAGTTGTGCTCATTGCGGCCGACGCATTTGGATTAGCTCCTCATGGACCATGGGAT CAATTCAACTTCGCACCTGAGAGTAGGATCAGCCGTCCAACTCAAATCCATTCTATTCAGGGCAATGTACAGAAT GCAGATGCTCTGATCAGTTCAGGAACAGCAAATTTCAATGGAAACAGCAGTTTCGTTACCTTGGATTTCGGCCTA GAGGTAAGTGTAGTACAAAGAAATGAAAGAAGCTTGGATGCCTAACGGAAATTGAACTAGGTTGGCGGCCGTGTT TTCTTTGACGTCGTCCATTCAACCGGAGATGCTCGCCTTTCTCTTTCCTTTACAGAATCGGCTGAATTCATCAGT CCTCTCAACTCAGATGATTCGTGTCATTCCGTCTTTACAATGGACGGCGATGGTGTCCAATCTCTCCCGGTACCC CTTAGCACAGGGAAATTTATGCAGACTATAAGCCAACAGCGTGGCGGGTTCCGTTTCATGACCATCGTAAGCCAC TCCGATGGCCAGATTGGCATCGCTGGAGTAGGCGTCGAAAATACATTCATGCCACATTGGGACGACTTGCGAGCG TATACTGGGTACTTCTTCACTAAAGATCCCAATTTCCATGATCCGGATTTTCTAACCAAATTGTGGTACGCTGGA GCATATACAGTCCAGACCAACACCATCGATGCGAACCAAGCTCGGCAGCAGCCTTGTCCAAGCCCGAAGGGTAGT TATCGGTTTGAAAGATTATAGATACCATTGCTGAATCTTTTTGCAAAGGGTGGGACAACAACGCAAGCGGTGGAC CAGTTGAAGGACCAATTCTGGTAGATGGTGCAAAGCGTGATCGGTAAGAATTTTCGAGTGTTCGTATTCTTTGGA TACTGATGGTCTTATCGAACAGAAATATATGGCCTGGTTCGTCAAATCAGACCTACGCCACATCAGATCTTTAAC ATGGTTCTCCAGGTGATATGGGCATATCCAGCCACACGGAGCTTGTGGCTCTGAATGACATCCTTCCAAGCAAGA ACGCGCTTCTCGTCATGTTTTCTACACAGGATCCGGCAACAGGGTCATTACAATATTCTGGTCCACCTATCAATG CAAAAGGTAGTGACACATATATTGCTTGGTCCTTGATTGGAACACATAATGTCTGGTTGTACACCGGAGACATTG ACTTCGTCCATGACGTCTGGAGTAATTTTACGAAGGCGCTTGCATTCCTGGAAAGTCAAGTTGATGAAACTGGAT TGATGGATGTCCCACAAGCGTTTTCCAATGACTGGGGGAGAGACGGAGGACAAGGACATAATATTGCGGCAAACG TTTTGCTTTATAGGGTATGCACCGTCTTCACTGAGTTCTATTTCCCATCTGTGTCTGACAACTCGAGGCAGTCTC TTGTAACAGGTTCGGAGTTAGCCCGCCAAATAGGAGATGCCCATTTGTCGAAAGCATATGCGGCAAATGCAACGA CATTGAAAAGAGATATTAATGATCTGCTTTGGGACAGCACGGCTGAGATGTTCCGTGACAACGACTCGTCGGATC TCCTTCCACAAGATGGAAATGCTATGGCAGTCCTGTTTAACGTTACACAAAACCAAGAGCAGGTAAAGGCAATTA GCAAAGGCTTGACTCAATTCTGGACAGATATCGGTCCACTGAGTCCCGAGCTCAATGATACGATCATCCCTTTCG TTGGGGGTTTCGAGGTGAGGATTGACCCCCTAGTTGGTGAAAATTAACGCGGTTCCTCTTCAGGTACAAGCGCAT TTTATTGCAGGTGAAGGTGAAAGGGCTCTTGATTTACTACACCAAGGTAAATCCTAATGTGCACAACTATTAAAA ACAAAAATACTCACCGTGACAATCCACCTCCTGTAGAGGTAGGCGAACTTTTGACTTCTATCGGATTTTGCTGTA GCAATTGAAATAGTGGGGGTACATGTTGTACACCAACTTGTCAGTGCAATCCACCCTGCTTGAGGGATTCACCGC CAACGGTTCATTGGGGTGAGTTCAGAGAGTCAAATGACACTTGCTCTGGCTTAGTGGCCATTCAGATATCGCGCA GCAGCAGGCTACGACTTTGATCATTCATACACGAGCCATAGCCACGGCTGGGCAACAGGTCCGACTCCGGCTATG ACGTTCCATATCCTCGGAATTGGAATAACGTCTCCTCAAGGAAAAACCTGGAGCATAAGTCCTGTCCTGAGTGGG CTTCAATCTGCTGAGGGAGGCCTAGAAACGGGGCTCGGATGGTTTGGAGTGAAGTGGGAAGTGAGCGACAGTATG CTGAGTGTGGCGGTCTCAACCCCACTTGGAACATCGGGGACGGTGAGGCTGCCTGGGGAGGGGCCGGTGACGGTG GACGGAATAGTACAGACAGGAATCAATGTCGAGTTGAGCGGAGGCGAGCACGTCCTGACGAGGCATGTGTAGTCA CGTGATATGAATCATAACTAGCTTTGCTCTGTTCTTGAGTCTCGACGCTCAACGTCAACTCTTCCTTGCTAATGG TCCGCTGGGGCTCGCTCCCGTGCTCGTCCCTTCTAACAGCCATCGTTTACCTCCTGCTGCTGCCAGGCTGGACCT TGGCAGAGGAACAGGCTGCATTTGATTGTCATGTCTCCACTGAGGGCGCAAACTTTGATTTGACAGGGCTCTCTG GCGAGCATACGTTAAACCGGACAAGGAACACACCGCCAACGAAGATGGTGGATTCCCTGCGGTTCAATCTCTGCT CAGACCTCAAACCCCAGGAGGACGTTGCGGAAGGCGACCAAGTGGGTGGTAGACAATGAGTCTGGTATCTCCTCT TTGCTCATCTTCATTGCACCTAGTGTCCTAAAGGAGCCCGTGCTTGTTTGACTAGTGTGAATCAGAAATCTCAAG AATCCGATCGTATAATTTCAGTCATCACTCTTGCAATGGCTTCCTCTACACGCTCCGTAACCGCTGGACTGTCTG GTCAGTGATCTGAATTGAAAGTGCTTTCTATTCCCGCTCAAAAGAAAAACTTGGGTATTCAGATCCCAAATTCAT CTCTATCTTGTTTGCCGGCCCCGAGTACTCGTCACCCTCTGAGTCCACTCCAACAAAACAGTTTCTGAACGTCAC GGTACATTGTGACCCGAATTCAAAGTCTGATCCCATTTTTCTCTCCTACGACGACTCGTTGCTCGCTTTAGAATG GCGGGCGCCCGGTGGTTGTCCATCCGAACAAAGTCCAGAGCCTCCGAAAGACCATGATGACAAGGATGATCCTAA GGAAGAGAATGTAGGCAGTGGGCTGGGATGGTTCTTCTTGGTGTACGCGATTCCATTCCATTTCGCGATGACTTT CTGTCCTCATAATTTTGCGCAGAATACTCTTGGCATTCGTGGCTTATTTTGGTCTGGGAGCTTACTATAACTATT CGACATATGGTGCTAGAGGCAAAGACCTTATTCCGTGGGTCCATTTCCTTCAGTCACTCGCCCTACTGACATGAC CTCTTGTTAGACACCGAGATTTCTGGCAGGAAGTGCCCTATATGCTCAAGGACGTTATCTCCCATCTTTGTTCGT CAGTGCATCCACGGCGATCGTCCAGAGGGGGCTATGTTGCTGTATGA |