Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|584000
Gene name
Locationscaffold_02:1783376..1787023
Strand+
Gene length (bp)3647
Transcript length (bp)2772
Coding sequence length (bp)2772
Protein length (aa) 924

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF09451 ATG27 Autophagy-related protein 27 1.2E-59 659 919
PF17389 Bac_rhamnosid6H Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain 3.9E-12 244 464
PF17390 Bac_rhamnosid_C Bacterial alpha-L-rhamnosidase C-terminal domain 2.1E-05 567 624

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q6CBS9|ATG27_YARLI Autophagy-related protein 27 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=ATG27 PE=3 SV=1 659 923 2.0E-21

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 18 0.45

Transmembrane Domains

Domain # Start End Length
1 851 873 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|584000
MLTSFIAVVLIAADAFGLAPHGPWDQFNFAPESRISRPTQIHSIQGNVQNADALISSGTANFNGNSSFVTLDFGL
EVGGRVFFDVVHSTGDARLSLSFTESAEFISPLNSDDSCHSVFTMDGDGVQSLPVPLSTGKFMQTISQQRGGFRF
MTIVSHSDGQIGIAGVGVENTFMPHWDDLRAYTGYFFTKDPNFHDPDFLTKLWYAGAYTVQTNTIDANQARQQPC
PSPKGWDNNASGGPVEGPILVDGAKRDRNIWPGDMGISSHTELVALNDILPSKNALLVMFSTQDPATGSLQYSGP
PINAKGSDTYIAWSLIGTHNVWLYTGDIDFVHDVWSNFTKALAFLESQVDETGLMDVPQAFSNDWGRDGGQGHNI
AANVLLYRSLVTGSELARQIGDAHLSKAYAANATTLKRDINDLLWDSTAEMFRDNDSSDLLPQDGNAMAVLFNVT
QNQEQVKAISKGLTQFWTDIGPLSPELNDTIIPFVGGFEVQAHFIAGEGERALDLLHQVQSTLLEGFTANGSLGY
RAAAGYDFDHSYTSHSHGWATGPTPAMTFHILGIGITSPQGKTWSISPVLSGLQSAEGGLETGLGWFGVKWEVSD
SMLSVAVSTPLGTSGTVRLPGEGPVTVDGIVQTGINVDFALFLSLDAQRQLFLANGWTLAEEQAAFDCHVSTEGA
NFDLTGLSGEHTLNRTRNTPPTKMVDSLRFNLCSDLKPQEDVAEGDQCPKGARACLTSVNQKSQESDRIISVITL
AMASSTRSVTAGLSDPKFISILFAGPEYSSPSESTPTKQFLNVTVHCDPNSKSDPIFLSYDDSLLALEWRAPGGC
PSEQSPEPPKDHDDKDDPKEENVGSGLGWFFLVILLAFVAYFGLGAYYNYSTYGARGKDLIPHRDFWQEVPYMLK
DVISHLCSSVHPRRSSRGGYVAV*
Coding >Agabi119p4|584000
ATGCTCACGTCTTTCATAGCAGTTGTGCTCATTGCGGCCGACGCATTTGGATTAGCTCCTCATGGACCATGGGAT
CAATTCAACTTCGCACCTGAGAGTAGGATCAGCCGTCCAACTCAAATCCATTCTATTCAGGGCAATGTACAGAAT
GCAGATGCTCTGATCAGTTCAGGAACAGCAAATTTCAATGGAAACAGCAGTTTCGTTACCTTGGATTTCGGCCTA
GAGGTTGGCGGCCGTGTTTTCTTTGACGTCGTCCATTCAACCGGAGATGCTCGCCTTTCTCTTTCCTTTACAGAA
TCGGCTGAATTCATCAGTCCTCTCAACTCAGATGATTCGTGTCATTCCGTCTTTACAATGGACGGCGATGGTGTC
CAATCTCTCCCGGTACCCCTTAGCACAGGGAAATTTATGCAGACTATAAGCCAACAGCGTGGCGGGTTCCGTTTC
ATGACCATCGTAAGCCACTCCGATGGCCAGATTGGCATCGCTGGAGTAGGCGTCGAAAATACATTCATGCCACAT
TGGGACGACTTGCGAGCGTATACTGGGTACTTCTTCACTAAAGATCCCAATTTCCATGATCCGGATTTTCTAACC
AAATTGTGGTACGCTGGAGCATATACAGTCCAGACCAACACCATCGATGCGAACCAAGCTCGGCAGCAGCCTTGT
CCAAGCCCGAAGGGGTGGGACAACAACGCAAGCGGTGGACCAGTTGAAGGACCAATTCTGGTAGATGGTGCAAAG
CGTGATCGAAATATATGGCCTGGTGATATGGGCATATCCAGCCACACGGAGCTTGTGGCTCTGAATGACATCCTT
CCAAGCAAGAACGCGCTTCTCGTCATGTTTTCTACACAGGATCCGGCAACAGGGTCATTACAATATTCTGGTCCA
CCTATCAATGCAAAAGGTAGTGACACATATATTGCTTGGTCCTTGATTGGAACACATAATGTCTGGTTGTACACC
GGAGACATTGACTTCGTCCATGACGTCTGGAGTAATTTTACGAAGGCGCTTGCATTCCTGGAAAGTCAAGTTGAT
GAAACTGGATTGATGGATGTCCCACAAGCGTTTTCCAATGACTGGGGGAGAGACGGAGGACAAGGACATAATATT
GCGGCAAACGTTTTGCTTTATAGGTCTCTTGTAACAGGTTCGGAGTTAGCCCGCCAAATAGGAGATGCCCATTTG
TCGAAAGCATATGCGGCAAATGCAACGACATTGAAAAGAGATATTAATGATCTGCTTTGGGACAGCACGGCTGAG
ATGTTCCGTGACAACGACTCGTCGGATCTCCTTCCACAAGATGGAAATGCTATGGCAGTCCTGTTTAACGTTACA
CAAAACCAAGAGCAGGTAAAGGCAATTAGCAAAGGCTTGACTCAATTCTGGACAGATATCGGTCCACTGAGTCCC
GAGCTCAATGATACGATCATCCCTTTCGTTGGGGGTTTCGAGGTACAAGCGCATTTTATTGCAGGTGAAGGTGAA
AGGGCTCTTGATTTACTACACCAAGTGCAATCCACCCTGCTTGAGGGATTCACCGCCAACGGTTCATTGGGATAT
CGCGCAGCAGCAGGCTACGACTTTGATCATTCATACACGAGCCATAGCCACGGCTGGGCAACAGGTCCGACTCCG
GCTATGACGTTCCATATCCTCGGAATTGGAATAACGTCTCCTCAAGGAAAAACCTGGAGCATAAGTCCTGTCCTG
AGTGGGCTTCAATCTGCTGAGGGAGGCCTAGAAACGGGGCTCGGATGGTTTGGAGTGAAGTGGGAAGTGAGCGAC
AGTATGCTGAGTGTGGCGGTCTCAACCCCACTTGGAACATCGGGGACGGTGAGGCTGCCTGGGGAGGGGCCGGTG
ACGGTGGACGGAATAGTACAGACAGGAATCAATGTCGACTTTGCTCTGTTCTTGAGTCTCGACGCTCAACGTCAA
CTCTTCCTTGCTAATGGCTGGACCTTGGCAGAGGAACAGGCTGCATTTGATTGTCATGTCTCCACTGAGGGCGCA
AACTTTGATTTGACAGGGCTCTCTGGCGAGCATACGTTAAACCGGACAAGGAACACACCGCCAACGAAGATGGTG
GATTCCCTGCGGTTCAATCTCTGCTCAGACCTCAAACCCCAGGAGGACGTTGCGGAAGGCGACCAATGTCCTAAA
GGAGCCCGTGCTTGTTTGACTAGTGTGAATCAGAAATCTCAAGAATCCGATCGTATAATTTCAGTCATCACTCTT
GCAATGGCTTCCTCTACACGCTCCGTAACCGCTGGACTGTCTGATCCCAAATTCATCTCTATCTTGTTTGCCGGC
CCCGAGTACTCGTCACCCTCTGAGTCCACTCCAACAAAACAGTTTCTGAACGTCACGGTACATTGTGACCCGAAT
TCAAAGTCTGATCCCATTTTTCTCTCCTACGACGACTCGTTGCTCGCTTTAGAATGGCGGGCGCCCGGTGGTTGT
CCATCCGAACAAAGTCCAGAGCCTCCGAAAGACCATGATGACAAGGATGATCCTAAGGAAGAGAATGTAGGCAGT
GGGCTGGGATGGTTCTTCTTGGTAATACTCTTGGCATTCGTGGCTTATTTTGGTCTGGGAGCTTACTATAACTAT
TCGACATATGGTGCTAGAGGCAAAGACCTTATTCCACACCGAGATTTCTGGCAGGAAGTGCCCTATATGCTCAAG
GACGTTATCTCCCATCTTTGTTCGTCAGTGCATCCACGGCGATCGTCCAGAGGGGGCTATGTTGCTGTATGA
Transcript >Agabi119p4|584000
ATGCTCACGTCTTTCATAGCAGTTGTGCTCATTGCGGCCGACGCATTTGGATTAGCTCCTCATGGACCATGGGAT
CAATTCAACTTCGCACCTGAGAGTAGGATCAGCCGTCCAACTCAAATCCATTCTATTCAGGGCAATGTACAGAAT
GCAGATGCTCTGATCAGTTCAGGAACAGCAAATTTCAATGGAAACAGCAGTTTCGTTACCTTGGATTTCGGCCTA
GAGGTTGGCGGCCGTGTTTTCTTTGACGTCGTCCATTCAACCGGAGATGCTCGCCTTTCTCTTTCCTTTACAGAA
TCGGCTGAATTCATCAGTCCTCTCAACTCAGATGATTCGTGTCATTCCGTCTTTACAATGGACGGCGATGGTGTC
CAATCTCTCCCGGTACCCCTTAGCACAGGGAAATTTATGCAGACTATAAGCCAACAGCGTGGCGGGTTCCGTTTC
ATGACCATCGTAAGCCACTCCGATGGCCAGATTGGCATCGCTGGAGTAGGCGTCGAAAATACATTCATGCCACAT
TGGGACGACTTGCGAGCGTATACTGGGTACTTCTTCACTAAAGATCCCAATTTCCATGATCCGGATTTTCTAACC
AAATTGTGGTACGCTGGAGCATATACAGTCCAGACCAACACCATCGATGCGAACCAAGCTCGGCAGCAGCCTTGT
CCAAGCCCGAAGGGGTGGGACAACAACGCAAGCGGTGGACCAGTTGAAGGACCAATTCTGGTAGATGGTGCAAAG
CGTGATCGAAATATATGGCCTGGTGATATGGGCATATCCAGCCACACGGAGCTTGTGGCTCTGAATGACATCCTT
CCAAGCAAGAACGCGCTTCTCGTCATGTTTTCTACACAGGATCCGGCAACAGGGTCATTACAATATTCTGGTCCA
CCTATCAATGCAAAAGGTAGTGACACATATATTGCTTGGTCCTTGATTGGAACACATAATGTCTGGTTGTACACC
GGAGACATTGACTTCGTCCATGACGTCTGGAGTAATTTTACGAAGGCGCTTGCATTCCTGGAAAGTCAAGTTGAT
GAAACTGGATTGATGGATGTCCCACAAGCGTTTTCCAATGACTGGGGGAGAGACGGAGGACAAGGACATAATATT
GCGGCAAACGTTTTGCTTTATAGGTCTCTTGTAACAGGTTCGGAGTTAGCCCGCCAAATAGGAGATGCCCATTTG
TCGAAAGCATATGCGGCAAATGCAACGACATTGAAAAGAGATATTAATGATCTGCTTTGGGACAGCACGGCTGAG
ATGTTCCGTGACAACGACTCGTCGGATCTCCTTCCACAAGATGGAAATGCTATGGCAGTCCTGTTTAACGTTACA
CAAAACCAAGAGCAGGTAAAGGCAATTAGCAAAGGCTTGACTCAATTCTGGACAGATATCGGTCCACTGAGTCCC
GAGCTCAATGATACGATCATCCCTTTCGTTGGGGGTTTCGAGGTACAAGCGCATTTTATTGCAGGTGAAGGTGAA
AGGGCTCTTGATTTACTACACCAAGTGCAATCCACCCTGCTTGAGGGATTCACCGCCAACGGTTCATTGGGATAT
CGCGCAGCAGCAGGCTACGACTTTGATCATTCATACACGAGCCATAGCCACGGCTGGGCAACAGGTCCGACTCCG
GCTATGACGTTCCATATCCTCGGAATTGGAATAACGTCTCCTCAAGGAAAAACCTGGAGCATAAGTCCTGTCCTG
AGTGGGCTTCAATCTGCTGAGGGAGGCCTAGAAACGGGGCTCGGATGGTTTGGAGTGAAGTGGGAAGTGAGCGAC
AGTATGCTGAGTGTGGCGGTCTCAACCCCACTTGGAACATCGGGGACGGTGAGGCTGCCTGGGGAGGGGCCGGTG
ACGGTGGACGGAATAGTACAGACAGGAATCAATGTCGACTTTGCTCTGTTCTTGAGTCTCGACGCTCAACGTCAA
CTCTTCCTTGCTAATGGCTGGACCTTGGCAGAGGAACAGGCTGCATTTGATTGTCATGTCTCCACTGAGGGCGCA
AACTTTGATTTGACAGGGCTCTCTGGCGAGCATACGTTAAACCGGACAAGGAACACACCGCCAACGAAGATGGTG
GATTCCCTGCGGTTCAATCTCTGCTCAGACCTCAAACCCCAGGAGGACGTTGCGGAAGGCGACCAATGTCCTAAA
GGAGCCCGTGCTTGTTTGACTAGTGTGAATCAGAAATCTCAAGAATCCGATCGTATAATTTCAGTCATCACTCTT
GCAATGGCTTCCTCTACACGCTCCGTAACCGCTGGACTGTCTGATCCCAAATTCATCTCTATCTTGTTTGCCGGC
CCCGAGTACTCGTCACCCTCTGAGTCCACTCCAACAAAACAGTTTCTGAACGTCACGGTACATTGTGACCCGAAT
TCAAAGTCTGATCCCATTTTTCTCTCCTACGACGACTCGTTGCTCGCTTTAGAATGGCGGGCGCCCGGTGGTTGT
CCATCCGAACAAAGTCCAGAGCCTCCGAAAGACCATGATGACAAGGATGATCCTAAGGAAGAGAATGTAGGCAGT
GGGCTGGGATGGTTCTTCTTGGTAATACTCTTGGCATTCGTGGCTTATTTTGGTCTGGGAGCTTACTATAACTAT
TCGACATATGGTGCTAGAGGCAAAGACCTTATTCCACACCGAGATTTCTGGCAGGAAGTGCCCTATATGCTCAAG
GACGTTATCTCCCATCTTTGTTCGTCAGTGCATCCACGGCGATCGTCCAGAGGGGGCTATGTTGCTGTATGA
Gene >Agabi119p4|584000
ATGCTCACGTCTTTCATAGCAGTTGTGCTCATTGCGGCCGACGCATTTGGATTAGCTCCTCATGGACCATGGGAT
CAATTCAACTTCGCACCTGAGAGTAGGATCAGCCGTCCAACTCAAATCCATTCTATTCAGGGCAATGTACAGAAT
GCAGATGCTCTGATCAGTTCAGGAACAGCAAATTTCAATGGAAACAGCAGTTTCGTTACCTTGGATTTCGGCCTA
GAGGTAAGTGTAGTACAAAGAAATGAAAGAAGCTTGGATGCCTAACGGAAATTGAACTAGGTTGGCGGCCGTGTT
TTCTTTGACGTCGTCCATTCAACCGGAGATGCTCGCCTTTCTCTTTCCTTTACAGAATCGGCTGAATTCATCAGT
CCTCTCAACTCAGATGATTCGTGTCATTCCGTCTTTACAATGGACGGCGATGGTGTCCAATCTCTCCCGGTACCC
CTTAGCACAGGGAAATTTATGCAGACTATAAGCCAACAGCGTGGCGGGTTCCGTTTCATGACCATCGTAAGCCAC
TCCGATGGCCAGATTGGCATCGCTGGAGTAGGCGTCGAAAATACATTCATGCCACATTGGGACGACTTGCGAGCG
TATACTGGGTACTTCTTCACTAAAGATCCCAATTTCCATGATCCGGATTTTCTAACCAAATTGTGGTACGCTGGA
GCATATACAGTCCAGACCAACACCATCGATGCGAACCAAGCTCGGCAGCAGCCTTGTCCAAGCCCGAAGGGTAGT
TATCGGTTTGAAAGATTATAGATACCATTGCTGAATCTTTTTGCAAAGGGTGGGACAACAACGCAAGCGGTGGAC
CAGTTGAAGGACCAATTCTGGTAGATGGTGCAAAGCGTGATCGGTAAGAATTTTCGAGTGTTCGTATTCTTTGGA
TACTGATGGTCTTATCGAACAGAAATATATGGCCTGGTTCGTCAAATCAGACCTACGCCACATCAGATCTTTAAC
ATGGTTCTCCAGGTGATATGGGCATATCCAGCCACACGGAGCTTGTGGCTCTGAATGACATCCTTCCAAGCAAGA
ACGCGCTTCTCGTCATGTTTTCTACACAGGATCCGGCAACAGGGTCATTACAATATTCTGGTCCACCTATCAATG
CAAAAGGTAGTGACACATATATTGCTTGGTCCTTGATTGGAACACATAATGTCTGGTTGTACACCGGAGACATTG
ACTTCGTCCATGACGTCTGGAGTAATTTTACGAAGGCGCTTGCATTCCTGGAAAGTCAAGTTGATGAAACTGGAT
TGATGGATGTCCCACAAGCGTTTTCCAATGACTGGGGGAGAGACGGAGGACAAGGACATAATATTGCGGCAAACG
TTTTGCTTTATAGGGTATGCACCGTCTTCACTGAGTTCTATTTCCCATCTGTGTCTGACAACTCGAGGCAGTCTC
TTGTAACAGGTTCGGAGTTAGCCCGCCAAATAGGAGATGCCCATTTGTCGAAAGCATATGCGGCAAATGCAACGA
CATTGAAAAGAGATATTAATGATCTGCTTTGGGACAGCACGGCTGAGATGTTCCGTGACAACGACTCGTCGGATC
TCCTTCCACAAGATGGAAATGCTATGGCAGTCCTGTTTAACGTTACACAAAACCAAGAGCAGGTAAAGGCAATTA
GCAAAGGCTTGACTCAATTCTGGACAGATATCGGTCCACTGAGTCCCGAGCTCAATGATACGATCATCCCTTTCG
TTGGGGGTTTCGAGGTGAGGATTGACCCCCTAGTTGGTGAAAATTAACGCGGTTCCTCTTCAGGTACAAGCGCAT
TTTATTGCAGGTGAAGGTGAAAGGGCTCTTGATTTACTACACCAAGGTAAATCCTAATGTGCACAACTATTAAAA
ACAAAAATACTCACCGTGACAATCCACCTCCTGTAGAGGTAGGCGAACTTTTGACTTCTATCGGATTTTGCTGTA
GCAATTGAAATAGTGGGGGTACATGTTGTACACCAACTTGTCAGTGCAATCCACCCTGCTTGAGGGATTCACCGC
CAACGGTTCATTGGGGTGAGTTCAGAGAGTCAAATGACACTTGCTCTGGCTTAGTGGCCATTCAGATATCGCGCA
GCAGCAGGCTACGACTTTGATCATTCATACACGAGCCATAGCCACGGCTGGGCAACAGGTCCGACTCCGGCTATG
ACGTTCCATATCCTCGGAATTGGAATAACGTCTCCTCAAGGAAAAACCTGGAGCATAAGTCCTGTCCTGAGTGGG
CTTCAATCTGCTGAGGGAGGCCTAGAAACGGGGCTCGGATGGTTTGGAGTGAAGTGGGAAGTGAGCGACAGTATG
CTGAGTGTGGCGGTCTCAACCCCACTTGGAACATCGGGGACGGTGAGGCTGCCTGGGGAGGGGCCGGTGACGGTG
GACGGAATAGTACAGACAGGAATCAATGTCGAGTTGAGCGGAGGCGAGCACGTCCTGACGAGGCATGTGTAGTCA
CGTGATATGAATCATAACTAGCTTTGCTCTGTTCTTGAGTCTCGACGCTCAACGTCAACTCTTCCTTGCTAATGG
TCCGCTGGGGCTCGCTCCCGTGCTCGTCCCTTCTAACAGCCATCGTTTACCTCCTGCTGCTGCCAGGCTGGACCT
TGGCAGAGGAACAGGCTGCATTTGATTGTCATGTCTCCACTGAGGGCGCAAACTTTGATTTGACAGGGCTCTCTG
GCGAGCATACGTTAAACCGGACAAGGAACACACCGCCAACGAAGATGGTGGATTCCCTGCGGTTCAATCTCTGCT
CAGACCTCAAACCCCAGGAGGACGTTGCGGAAGGCGACCAAGTGGGTGGTAGACAATGAGTCTGGTATCTCCTCT
TTGCTCATCTTCATTGCACCTAGTGTCCTAAAGGAGCCCGTGCTTGTTTGACTAGTGTGAATCAGAAATCTCAAG
AATCCGATCGTATAATTTCAGTCATCACTCTTGCAATGGCTTCCTCTACACGCTCCGTAACCGCTGGACTGTCTG
GTCAGTGATCTGAATTGAAAGTGCTTTCTATTCCCGCTCAAAAGAAAAACTTGGGTATTCAGATCCCAAATTCAT
CTCTATCTTGTTTGCCGGCCCCGAGTACTCGTCACCCTCTGAGTCCACTCCAACAAAACAGTTTCTGAACGTCAC
GGTACATTGTGACCCGAATTCAAAGTCTGATCCCATTTTTCTCTCCTACGACGACTCGTTGCTCGCTTTAGAATG
GCGGGCGCCCGGTGGTTGTCCATCCGAACAAAGTCCAGAGCCTCCGAAAGACCATGATGACAAGGATGATCCTAA
GGAAGAGAATGTAGGCAGTGGGCTGGGATGGTTCTTCTTGGTGTACGCGATTCCATTCCATTTCGCGATGACTTT
CTGTCCTCATAATTTTGCGCAGAATACTCTTGGCATTCGTGGCTTATTTTGGTCTGGGAGCTTACTATAACTATT
CGACATATGGTGCTAGAGGCAAAGACCTTATTCCGTGGGTCCATTTCCTTCAGTCACTCGCCCTACTGACATGAC
CTCTTGTTAGACACCGAGATTTCTGGCAGGAAGTGCCCTATATGCTCAAGGACGTTATCTCCCATCTTTGTTCGT
CAGTGCATCCACGGCGATCGTCCAGAGGGGGCTATGTTGCTGTATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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