Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|579700
Gene name
Locationscaffold_02:1117970..1118987
Strand-
Gene length (bp)1017
Transcript length (bp)810
Coding sequence length (bp)810
Protein length (aa) 270

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF17390 Bac_rhamnosid_C Bacterial alpha-L-rhamnosidase C-terminal domain 1.9E-06 186 245

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 31 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|579700
MGDANLSEGYAANAATLKSSINNLLWDSRAEMFRDNDSTDLLPQDGNSLAILFNVTEKQDQAKAVSKGLTRFWTD
IGPLTPELNDTISPFVGGFEVQAHFIAGEGERALDLLHKEVGKLLTSTEYCCSNLVEGFTANGSLGYRSAAAGGY
NFDHTYTSHSHGWSTGPTPAMTFHILGIGLVSPQGKTWSISPVLSGLQSAEGGLETGLGWFGVKWNVSDSMLTVA
VSTPTGTSGTVRLPGKGPVTMDGAVQAETNVELSGGEHVLTRQV*
Coding >Agabi119p4|579700
ATGGGAGACGCCAATTTGTCGGAAGGATATGCAGCAAATGCAGCAACATTGAAAAGCAGTATTAATAACTTGCTT
TGGGATAGCAGGGCTGAAATGTTCCGTGATAACGATTCGACGGATCTTCTTCCACAAGATGGAAATTCTTTGGCA
ATCCTATTTAATGTGACAGAAAAGCAAGACCAGGCAAAGGCAGTTAGCAAAGGCTTGACTCGATTCTGGACGGAC
ATCGGCCCCCTGACACCCGAGCTCAATGACACGATCAGCCCTTTCGTTGGGGGATTCGAGGTACAAGCACATTTT
ATTGCGGGTGAAGGTGAAAGGGCTCTTGATTTACTGCACAAAGAGGTAGGCAAACTTTTGACTTCTACCGAATAT
TGCTGTAGCAACCTGGTTGAGGGATTCACCGCAAACGGTTCATTGGGATATCGCTCAGCGGCTGCGGGAGGCTAC
AACTTTGATCACACATACACGAGTCATAGCCACGGCTGGTCAACGGGTCCGACCCCGGCTATGACATTCCATATC
CTAGGAATTGGACTAGTATCTCCTCAAGGAAAAACCTGGAGCATAAGTCCTGTCCTGAGTGGGCTTCAATCTGCT
GAGGGAGGCCTAGAAACGGGACTCGGATGGTTTGGAGTGAAGTGGAATGTGAGCGATAGTATGCTGACTGTGGCG
GTCTCAACCCCCACTGGAACATCGGGGACGGTGAGGCTGCCCGGGAAGGGGCCAGTGACCATGGACGGAGCAGTT
CAGGCCGAAACAAATGTCGAGTTGAGCGGAGGCGAGCATGTCTTGACGAGGCAGGTGTAG
Transcript >Agabi119p4|579700
ATGGGAGACGCCAATTTGTCGGAAGGATATGCAGCAAATGCAGCAACATTGAAAAGCAGTATTAATAACTTGCTT
TGGGATAGCAGGGCTGAAATGTTCCGTGATAACGATTCGACGGATCTTCTTCCACAAGATGGAAATTCTTTGGCA
ATCCTATTTAATGTGACAGAAAAGCAAGACCAGGCAAAGGCAGTTAGCAAAGGCTTGACTCGATTCTGGACGGAC
ATCGGCCCCCTGACACCCGAGCTCAATGACACGATCAGCCCTTTCGTTGGGGGATTCGAGGTACAAGCACATTTT
ATTGCGGGTGAAGGTGAAAGGGCTCTTGATTTACTGCACAAAGAGGTAGGCAAACTTTTGACTTCTACCGAATAT
TGCTGTAGCAACCTGGTTGAGGGATTCACCGCAAACGGTTCATTGGGATATCGCTCAGCGGCTGCGGGAGGCTAC
AACTTTGATCACACATACACGAGTCATAGCCACGGCTGGTCAACGGGTCCGACCCCGGCTATGACATTCCATATC
CTAGGAATTGGACTAGTATCTCCTCAAGGAAAAACCTGGAGCATAAGTCCTGTCCTGAGTGGGCTTCAATCTGCT
GAGGGAGGCCTAGAAACGGGACTCGGATGGTTTGGAGTGAAGTGGAATGTGAGCGATAGTATGCTGACTGTGGCG
GTCTCAACCCCCACTGGAACATCGGGGACGGTGAGGCTGCCCGGGAAGGGGCCAGTGACCATGGACGGAGCAGTT
CAGGCCGAAACAAATGTCGAGTTGAGCGGAGGCGAGCATGTCTTGACGAGGCAGGTGTAG
Gene >Agabi119p4|579700
ATGGGAGACGCCAATTTGTCGGAAGGATATGCAGCAAATGCAGCAACATTGAAAAGCAGTATTAATAACTTGCTT
TGGGATAGCAGGGCTGAAATGTTCCGTGATAACGATTCGACGGATCTTCTTCCACAAGATGGAAATTCTTTGGCA
ATCCTATTTAATGTGACAGAAAAGCAAGACCAGGCAAAGGCAGTTAGCAAAGGCTTGACTCGATTCTGGACGGAC
ATCGGCCCCCTGACACCCGAGCTCAATGACACGATCAGCCCTTTCGTTGGGGGATTCGAGGTGAGGATTTACCCC
TTAATCGGTGAAAATTAACGCGGTTCCCCTTTAGGTACAAGCACATTTTATTGCGGGTGAAGGTGAAAGGGCTCT
TGATTTACTGCACAAAGGTAAGTCTTTATACGTGTAATTATTTAAAAATACTCACCGCTACAATCCATTTCCTAC
AGAGGTAGGCAAACTTTTGACTTCTACCGAATATTGCTGTAGCAAGTAAAATAGTGGGGGTATATGCTGTACACC
AACTTGTCGGTACAATCCAGCCTGGTTGAGGGATTCACCGCAAACGGTTCATTGGGGTGAGTGTAATGTCACAGC
GTGGTTGCTCCGGCTAATTGGCCATTCAGATATCGCTCAGCGGCTGCGGGAGGCTACAACTTTGATCACACATAC
ACGAGTCATAGCCACGGCTGGTCAACGGGTCCGACCCCGGCTATGACATTCCATATCCTAGGAATTGGACTAGTA
TCTCCTCAAGGAAAAACCTGGAGCATAAGTCCTGTCCTGAGTGGGCTTCAATCTGCTGAGGGAGGCCTAGAAACG
GGACTCGGATGGTTTGGAGTGAAGTGGAATGTGAGCGATAGTATGCTGACTGTGGCGGTCTCAACCCCCACTGGA
ACATCGGGGACGGTGAGGCTGCCCGGGAAGGGGCCAGTGACCATGGACGGAGCAGTTCAGGCCGAAACAAATGTC
GAGTTGAGCGGAGGCGAGCATGTCTTGACGAGGCAGGTGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail