Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|578500
Gene name
Locationscaffold_02:644396..645714
Strand-
Gene length (bp)1318
Transcript length (bp)1029
Coding sequence length (bp)1029
Protein length (aa) 343

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00106 adh_short short chain dehydrogenase 1.5E-20 28 176
PF13561 adh_short_C2 Enoyl-(Acyl carrier protein) reductase 8.3E-16 34 158
PF08659 KR KR domain 9.0E-06 29 134

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q5F389|WWOX_CHICK WW domain-containing oxidoreductase OS=Gallus gallus GN=WWOX PE=2 SV=2 11 303 9.0E-26
sp|Q9NZC7|WWOX_HUMAN WW domain-containing oxidoreductase OS=Homo sapiens GN=WWOX PE=1 SV=1 11 328 2.0E-24
sp|Q5R9W5|WWOX_PONAB WW domain-containing oxidoreductase OS=Pongo abelii GN=WWOX PE=2 SV=1 11 328 5.0E-24
sp|Q8NBN7|RDH13_HUMAN Retinol dehydrogenase 13 OS=Homo sapiens GN=RDH13 PE=1 SV=2 22 335 6.0E-24
sp|Q8CEE7|RDH13_MOUSE Retinol dehydrogenase 13 OS=Mus musculus GN=Rdh13 PE=1 SV=1 22 248 2.0E-23
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Swissprot ID Swissprot Description Start End E-value
sp|Q5F389|WWOX_CHICK WW domain-containing oxidoreductase OS=Gallus gallus GN=WWOX PE=2 SV=2 11 303 9.0E-26
sp|Q9NZC7|WWOX_HUMAN WW domain-containing oxidoreductase OS=Homo sapiens GN=WWOX PE=1 SV=1 11 328 2.0E-24
sp|Q5R9W5|WWOX_PONAB WW domain-containing oxidoreductase OS=Pongo abelii GN=WWOX PE=2 SV=1 11 328 5.0E-24
sp|Q8NBN7|RDH13_HUMAN Retinol dehydrogenase 13 OS=Homo sapiens GN=RDH13 PE=1 SV=2 22 335 6.0E-24
sp|Q8CEE7|RDH13_MOUSE Retinol dehydrogenase 13 OS=Mus musculus GN=Rdh13 PE=1 SV=1 22 248 2.0E-23
sp|Q91WL8|WWOX_MOUSE WW domain-containing oxidoreductase OS=Mus musculus GN=Wwox PE=1 SV=1 11 310 2.0E-22
sp|Q6UX07|DHR13_HUMAN Dehydrogenase/reductase SDR family member 13 OS=Homo sapiens GN=DHRS13 PE=2 SV=1 11 301 3.0E-22
sp|Q96NR8|RDH12_HUMAN Retinol dehydrogenase 12 OS=Homo sapiens GN=RDH12 PE=1 SV=3 5 293 4.0E-22
sp|Q8BYK4|RDH12_MOUSE Retinol dehydrogenase 12 OS=Mus musculus GN=Rdh12 PE=2 SV=1 22 250 2.0E-21
sp|P59837|RDH12_BOVIN Retinol dehydrogenase 12 OS=Bos taurus GN=RDH12 PE=2 SV=1 5 250 7.0E-21
sp|Q9VLU5|WWOX_DROME WW domain-containing oxidoreductase OS=Drosophila melanogaster GN=Wwox PE=2 SV=1 24 303 8.0E-21
sp|Q9ERI6|RDH14_MOUSE Retinol dehydrogenase 14 OS=Mus musculus GN=Rdh14 PE=1 SV=1 25 248 9.0E-21
sp|Q5SS80|DHR13_MOUSE Dehydrogenase/reductase SDR family member 13 OS=Mus musculus GN=Dhrs13 PE=1 SV=1 24 314 7.0E-20
sp|Q803A8|WWOX_DANRE WW domain-containing oxidoreductase OS=Danio rerio GN=wwox PE=2 SV=1 24 297 1.0E-19
sp|O74959|YJCD_SCHPO Uncharacterized oxidoreductase C736.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC736.13 PE=3 SV=1 24 321 2.0E-19
sp|Q17QU7|DHR13_BOVIN Dehydrogenase/reductase SDR family member 13 OS=Bos taurus GN=DHRS13 PE=2 SV=1 11 301 5.0E-19
sp|Q9HBH5|RDH14_HUMAN Retinol dehydrogenase 14 OS=Homo sapiens GN=RDH14 PE=1 SV=1 25 248 7.0E-19
sp|Q8TC12|RDH11_HUMAN Retinol dehydrogenase 11 OS=Homo sapiens GN=RDH11 PE=1 SV=2 24 253 1.0E-18
sp|Q9QYF1|RDH11_MOUSE Retinol dehydrogenase 11 OS=Mus musculus GN=Rdh11 PE=1 SV=2 22 278 4.0E-18
sp|Q8N5I4|DHRSX_HUMAN Dehydrogenase/reductase SDR family member on chromosome X OS=Homo sapiens GN=DHRSX PE=2 SV=2 27 294 1.0E-15
sp|A2RVM0|TIC32_ARATH Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana GN=TIC32 PE=2 SV=1 29 314 9.0E-12
sp|Q8VBZ0|DHRSX_MOUSE Dehydrogenase/reductase SDR family member on chromosome X homolog OS=Mus musculus GN=Dhrsx PE=1 SV=2 28 325 1.0E-11
sp|Q6RVV4|TIC32_PEA Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum GN=TIC32 PE=1 SV=1 29 278 4.0E-11
sp|Q8K354|CBR3_MOUSE Carbonyl reductase [NADPH] 3 OS=Mus musculus GN=Cbr3 PE=1 SV=1 28 283 2.0E-10
sp|P48758|CBR1_MOUSE Carbonyl reductase [NADPH] 1 OS=Mus musculus GN=Cbr1 PE=1 SV=3 31 300 3.0E-10
sp|Q92247|BLI4_NEUCR Putative oxidoreductase bli-4, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=bli-4 PE=1 SV=1 24 245 7.0E-10
sp|Q42536|PORA_ARATH Protochlorophyllide reductase A, chloroplastic OS=Arabidopsis thaliana GN=PORA PE=1 SV=2 25 151 2.0E-09
sp|A0PJE2|DHR12_HUMAN Dehydrogenase/reductase SDR family member 12 OS=Homo sapiens GN=DHRS12 PE=2 SV=2 17 275 3.0E-09
sp|O75828|CBR3_HUMAN Carbonyl reductase [NADPH] 3 OS=Homo sapiens GN=CBR3 PE=1 SV=3 28 283 6.0E-09
sp|Q28960|CBR1_PIG Carbonyl reductase [NADPH] 1 OS=Sus scrofa GN=CBR1 PE=1 SV=3 28 246 1.0E-08
sp|Q39617|POR_CHLRE Protochlorophyllide reductase, chloroplastic OS=Chlamydomonas reinhardtii GN=PORA PE=3 SV=1 9 141 1.0E-08
sp|O80333|POR_MARPA Protochlorophyllide reductase, chloroplastic OS=Marchantia paleacea GN=PORA PE=2 SV=1 18 172 1.0E-08
sp|P16152|CBR1_HUMAN Carbonyl reductase [NADPH] 1 OS=Homo sapiens GN=CBR1 PE=1 SV=3 31 301 2.0E-08
sp|Q8MI29|CBR1_MACFA Carbonyl reductase [NADPH] 1 OS=Macaca fascicularis GN=CBR1 PE=2 SV=1 28 278 2.0E-08
sp|Q5RCU5|CBR1_PONAB Carbonyl reductase [NADPH] 1 OS=Pongo abelii GN=CBR1 PE=2 SV=3 31 301 3.0E-08
sp|Q41249|PORA_CUCSA Protochlorophyllide reductase, chloroplastic OS=Cucumis sativus GN=PORA PE=2 SV=1 15 141 1.0E-07
sp|P72332|NODG_RHIS3 Nodulation protein G OS=Rhizobium sp. (strain N33) GN=nodG PE=3 SV=1 24 246 2.0E-07
sp|Q8W3D9|PORB_ORYSJ Protochlorophyllide reductase B, chloroplastic OS=Oryza sativa subsp. japonica GN=PORB PE=2 SV=1 18 151 2.0E-07
sp|Q53877|DNRU_STRS5 Putative daunorubicin C-13 ketoreductase DnrU OS=Streptomyces sp. (strain C5) PE=3 SV=1 25 142 2.0E-07
sp|O48741|PORC_ARATH Protochlorophyllide reductase C, chloroplastic OS=Arabidopsis thaliana GN=PORC PE=1 SV=1 18 141 3.0E-07
sp|Q9SDT1|POR_DAUCA Protochlorophyllide reductase, chloroplastic OS=Daucus carota GN=POR1 PE=2 SV=1 25 141 4.0E-07
sp|P46331|YXBG_BACSU Uncharacterized oxidoreductase YxbG OS=Bacillus subtilis (strain 168) GN=yxbG PE=3 SV=2 25 158 4.0E-07
sp|Q01289|POR_PEA Protochlorophyllide reductase, chloroplastic OS=Pisum sativum GN=3PCR PE=1 SV=1 25 141 5.0E-07
sp|Q6P7J1|DHI1A_XENLA Hydroxysteroid 11-beta-dehydrogenase 1-like protein A OS=Xenopus laevis GN=hsd11b1l-a PE=2 SV=1 24 147 5.0E-07
sp|Q42850|PORB_HORVU Protochlorophyllide reductase B, chloroplastic OS=Hordeum vulgare GN=PORB PE=2 SV=1 25 151 6.0E-07
sp|Q9ZAU1|DNRU_STRPE Putative daunorubicin C-13 ketoreductase DnrU OS=Streptomyces peucetius GN=dnrU PE=3 SV=1 25 142 1.0E-06
sp|P31808|YCIK_ECOLI Uncharacterized oxidoreductase YciK OS=Escherichia coli (strain K12) GN=yciK PE=1 SV=3 25 139 2.0E-06
sp|P21218|PORB_ARATH Protochlorophyllide reductase B, chloroplastic OS=Arabidopsis thaliana GN=PORB PE=1 SV=3 25 141 2.0E-06
sp|P47844|CBR1_RABIT Carbonyl reductase [NADPH] 1 OS=Oryctolagus cuniculus GN=CBR1 PE=2 SV=2 28 301 3.0E-06
sp|Q9Y140|DHRS7_DROME Dehydrogenase/reductase SDR family protein 7-like OS=Drosophila melanogaster GN=CG7601 PE=2 SV=1 22 250 3.0E-06
sp|Q3SZD7|CBR1_BOVIN Carbonyl reductase [NADPH] 1 OS=Bos taurus GN=CBR1 PE=2 SV=1 31 281 4.0E-06
sp|Q6QLL4|DHI1_CAVPO Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Cavia porcellus GN=HSD11B1 PE=1 SV=3 25 157 6.0E-06
sp|O88736|DHB7_MOUSE 3-keto-steroid reductase OS=Mus musculus GN=Hsd17b7 PE=1 SV=1 28 118 6.0E-06
sp|P50172|DHI1_MOUSE Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Mus musculus GN=Hsd11b1 PE=1 SV=3 25 154 7.0E-06
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GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID5
Orthogroup410
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|041480
Agaricus bisporus var bisporus H97 AgabiH97|041480
Agaricus bisporus var bisporus H97 AgabiH97|041500
Agaricus bisporus var burnettii H119p4 Agabi119p4|041480
Agaricus bisporus var burnettii H119p4 Agabi119p4|578500 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|578500
MGKKSIFGFLYDQLRRVPDVIQTDLKDKTVVVVGANTGIGFQAAQHFARMNAGRLILACRSEKKGQAAVDRLKAA
TGYSKAELWLVDLSTFSSVQEFADRTVKDLERLDILLLNAAVLHREDGSYTTTKDGWETTLHVNDLSFTLLSFLL
LPLMVDTAKKFNTHPRLVTVTSELHFMTKFEDKIFESPNAIEFMSSKDYCTPQIMKTRYPDTKLLNVFFTRALSN
RSKHQPVVFNCVNPGFCRSELLRDAKGMVTKLMSLLLARSAEEGSRQLIWAAIGLPESGSLDEMRGAYVNRASIE
EPSDFVLGEEGKKREDKLYADTISIIQKVDPRVKEIESQYLI*
Coding >Agabi119p4|578500
ATGGGCAAGAAAAGCATTTTCGGCTTCCTCTATGATCAACTTCGTCGAGTTCCCGATGTCATTCAGACAGATCTC
AAGGACAAGACGGTCGTCGTTGTTGGCGCCAATACTGGTATTGGTTTTCAAGCTGCACAACACTTCGCGAGAATG
AATGCCGGAAGACTTATTCTTGCTTGTCGCAGCGAGAAGAAAGGCCAAGCAGCTGTGGATCGTTTGAAAGCAGCC
ACTGGCTATTCCAAGGCAGAATTGTGGTTGGTTGACCTTTCTACATTCTCGTCCGTCCAAGAATTCGCCGATCGG
ACCGTGAAAGACCTAGAGAGGTTGGATATTCTGTTGTTGAATGCTGCTGTTCTACATCGAGAAGATGGATCATAT
ACCACAACTAAAGATGGATGGGAAACGACGCTCCACGTGAACGACCTTTCTTTCACACTGCTCTCTTTTTTGTTG
CTCCCTCTTATGGTTGACACCGCCAAGAAGTTCAACACACATCCAAGGCTCGTCACCGTCACAAGCGAGCTTCAC
TTTATGACGAAGTTCGAGGATAAAATATTTGAAAGTCCTAATGCAATCGAGTTCATGAGCAGCAAAGATTACTGT
ACGCCCCAAATCATGAAAACCCGTTATCCTGATACCAAGCTTCTGAATGTATTCTTCACTCGTGCTCTCAGCAAC
CGATCGAAACACCAGCCTGTTGTCTTCAATTGTGTTAACCCTGGCTTCTGTCGTTCTGAACTCCTCAGAGATGCA
AAGGGCATGGTCACCAAGCTGATGTCATTATTATTAGCCCGGAGTGCTGAAGAGGGTAGTCGCCAATTAATCTGG
GCTGCTATCGGTCTTCCGGAGAGTGGGTCCTTGGATGAAATGAGAGGCGCATACGTCAACAGAGCGAGCATAGAA
GAGCCTTCAGATTTTGTCCTTGGGGAAGAGGGTAAGAAGAGAGAGGATAAGCTATATGCCGACACGATTTCTATC
ATTCAAAAAGTGGATCCGCGCGTGAAAGAGATAGAGTCACAGTATCTGATCTAA
Transcript >Agabi119p4|578500
ATGGGCAAGAAAAGCATTTTCGGCTTCCTCTATGATCAACTTCGTCGAGTTCCCGATGTCATTCAGACAGATCTC
AAGGACAAGACGGTCGTCGTTGTTGGCGCCAATACTGGTATTGGTTTTCAAGCTGCACAACACTTCGCGAGAATG
AATGCCGGAAGACTTATTCTTGCTTGTCGCAGCGAGAAGAAAGGCCAAGCAGCTGTGGATCGTTTGAAAGCAGCC
ACTGGCTATTCCAAGGCAGAATTGTGGTTGGTTGACCTTTCTACATTCTCGTCCGTCCAAGAATTCGCCGATCGG
ACCGTGAAAGACCTAGAGAGGTTGGATATTCTGTTGTTGAATGCTGCTGTTCTACATCGAGAAGATGGATCATAT
ACCACAACTAAAGATGGATGGGAAACGACGCTCCACGTGAACGACCTTTCTTTCACACTGCTCTCTTTTTTGTTG
CTCCCTCTTATGGTTGACACCGCCAAGAAGTTCAACACACATCCAAGGCTCGTCACCGTCACAAGCGAGCTTCAC
TTTATGACGAAGTTCGAGGATAAAATATTTGAAAGTCCTAATGCAATCGAGTTCATGAGCAGCAAAGATTACTGT
ACGCCCCAAATCATGAAAACCCGTTATCCTGATACCAAGCTTCTGAATGTATTCTTCACTCGTGCTCTCAGCAAC
CGATCGAAACACCAGCCTGTTGTCTTCAATTGTGTTAACCCTGGCTTCTGTCGTTCTGAACTCCTCAGAGATGCA
AAGGGCATGGTCACCAAGCTGATGTCATTATTATTAGCCCGGAGTGCTGAAGAGGGTAGTCGCCAATTAATCTGG
GCTGCTATCGGTCTTCCGGAGAGTGGGTCCTTGGATGAAATGAGAGGCGCATACGTCAACAGAGCGAGCATAGAA
GAGCCTTCAGATTTTGTCCTTGGGGAAGAGGGTAAGAAGAGAGAGGATAAGCTATATGCCGACACGATTTCTATC
ATTCAAAAAGTGGATCCGCGCGTGAAAGAGATAGAGTCACAGTATCTGATCTAA
Gene >Agabi119p4|578500
ATGGGCAAGAAAAGCATTTTCGGCTTCCTCTATGATCAACTTCGTCGAGTTCCCGATGTCATTCAGACAGATCTC
AAGGACAAGACGGTCGTCGTTGTTGGCGCCAATACTGGTATTGGTTTTCAAGCTGCACAACACTTCGCGAGAATG
AATGCCGGAAGACTTATTCTTGCTTGTCGCAGCGAGAAGAAAGGCCAAGCAGCTGTGGATCGTCAGTACATTATT
TTTAGTTCTCAGTTTTTTGACTAGTCGATTAATACGCATGATCCCAAATGCAGGTTTGAAAGCAGCCACTGGCTA
TTCCAAGGCAGAATTGTGGTTGGTTGACCTTTCTACATTCTCGTCCGTCCAAGAATTCGCCGATCGGACCGTGAA
AGACCTAGAGAGGTTGGATATTCTGTTGTTGAATGCTGCTGTTCTACATCGAGAAGATGGATCATATACCACAAC
TAAAGATGGATGGGAAACGACGTACGTGCTCATCTGCCAATCATGATGGAACGTTAATGGTTGAATATGTCCAAC
TAGGCTCCACGTGAACGACCTTTCTTTCACACTGCTCTCTTTTTTGTTGCTCCCTCTTATGGTTGACACCGCCAA
GAAGTTCAACACACATCCAAGGCTCGTCACCGTCACAAGCGAGCTTCACTTTATGACGAAGTTCGAGGATAAAAT
ATTTGAAAGTCCTAATGCAATCGAGTTCATGAGCAGCAAAGATTACTGTACGCCCCAGTGAGTTGGCATGTAAAA
CGTCGACTCGGCAAAAAAACTGATAACGAACCAGAATCATGAAAACCCGTTATCCTGATACCAAGCGTGAGTTGT
TCCCTACATTCACTGGACCTTTTGTTGTTGATATTCTTTTGCTAGTTCTGAATGTATTCTTCACTCGTGCTCTCA
GCAACCGATCGAAACACCAGCCTGTTGTCTTCAATTGTGTTAACCCTGGCTTCTGTCGTTCTGAACTCCTCAGAG
ATGCAAAGGGCATGGTCACCAAGCTGATGTCATTATTATTAGCCCGGAGTGCTGAAGAGGGTAGTCGCCAATTAA
TCTGGGCTGCTATCGGTCTTCCGGAGAGTGGGTCCTTGGATGAAATGAGAGGCGCATACGTCAACAGAGCGAGCA
TAGAAGAGCCTTCAGATTTTGTCCTTGGGGAAGAGGGTAAGAAGAGAGAGGATAAGCTATATGTGAGTTCAAATC
AAATACTTCATGTATAAACATTTTTGACAATACATTTTTCCGGCAGGCCGACACGATTTCTATCATTCAAAAAGT
GGATCCGCGCGTGAAAGAGATAGAGTCACAGTATCTGATCTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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