© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Agabi119p4|568850 |
| Gene name | |
| Location | scaffold_01a:3272679..3273659 |
| Strand | - |
| Gene length (bp) | 980 |
| Transcript length (bp) | 873 |
| Coding sequence length (bp) | 873 |
| Protein length (aa) | 291 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF12697 | Abhydrolase_6 | Alpha/beta hydrolase family | 1.2E-11 | 36 | 279 |
| PF12146 | Hydrolase_4 | Serine aminopeptidase, S33 | 1.4E-07 | 34 | 145 |
| PF00561 | Abhydrolase_1 | alpha/beta hydrolase fold | 5.1E-07 | 34 | 137 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P9WGS3|EPHD_MYCTU | Probable oxidoreductase EphD OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=ephD PE=1 SV=1 | 10 | 104 | 2.0E-06 |
| sp|P9WGS2|EPHD_MYCTO | Probable oxidoreductase EphD OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=ephD PE=3 SV=1 | 10 | 104 | 2.0E-06 |
| sp|P66778|EPHD_MYCBO | Probable oxidoreductase EphD OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=ephD PE=3 SV=1 | 10 | 104 | 2.0E-06 |
| sp|Q890D8|PIP_LACPL | Proline iminopeptidase OS=Lactobacillus plantarum (strain ATCC BAA-793 / NCIMB 8826 / WCFS1) GN=pip PE=3 SV=2 | 17 | 116 | 3.0E-06 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 48 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Agabi119p4|568850 MTKDLEVNTSRFVKSADGTEIYADATGNRSPSTPVLVLVHGGFLCKGAFNPIFDDPKWTSNLFLVRYDARGHGRS GKPDTEEAWESKRFSEDFEAVCREFEVKEAYVLGWSVGAAVLADITAYTTPVKMLGFINVAGLIYVNPSVNSRVG SRMSREWGPPFLFPPSEDALQESCAYFLRICSEELSPELFRILLEGMLMQSRGIAKRVCSRKQNPEKMLQEARGG RIPLLAISGLKDKALITEKLKGELEDLGWKRMTYRYLQDADHMPWVSCAEEFREIVLAWIKELTP* |
| Coding | >Agabi119p4|568850 ATGACCAAAGACTTGGAAGTAAATACCTCTCGCTTCGTGAAATCAGCCGATGGCACGGAAATCTATGCTGACGCG ACAGGAAATCGCTCGCCAAGCACCCCAGTCCTCGTTTTGGTCCATGGTGGTTTCTTGTGCAAAGGCGCATTTAAT CCCATCTTCGACGATCCTAAATGGACCTCCAATCTATTCTTAGTGCGGTACGATGCCCGTGGACATGGTAGAAGC GGCAAACCGGACACTGAGGAAGCCTGGGAATCCAAACGGTTTTCGGAAGATTTTGAAGCTGTTTGCAGAGAATTC GAAGTGAAAGAAGCATATGTCTTGGGATGGAGTGTCGGCGCCGCTGTGCTCGCTGATATCACGGCCTACACCACT CCAGTTAAGATGCTTGGCTTCATTAATGTCGCAGGACTTATATACGTGAACCCCTCGGTCAATTCACGCGTAGGT AGTCGAATGTCACGTGAATGGGGGCCCCCATTCTTGTTCCCTCCTTCCGAAGATGCCCTCCAAGAATCTTGTGCT TATTTCCTTCGAATATGCTCCGAAGAACTCTCCCCAGAGCTCTTTCGCATTTTATTGGAAGGAATGCTCATGCAG TCGCGCGGAATAGCGAAGCGGGTTTGTTCAAGAAAACAGAATCCTGAGAAGATGTTGCAGGAGGCGCGAGGCGGG AGAATTCCACTCCTGGCCATCAGCGGTTTAAAAGACAAAGCATTGATTACTGAGAAATTAAAAGGAGAGTTGGAA GACTTGGGATGGAAGAGGATGACCTATCGGTATTTACAAGACGCGGACCATATGCCTTGGGTGTCTTGTGCAGAA GAGTTTAGAGAAATTGTGTTGGCATGGATAAAGGAGTTAACACCATAA |
| Transcript | >Agabi119p4|568850 ATGACCAAAGACTTGGAAGTAAATACCTCTCGCTTCGTGAAATCAGCCGATGGCACGGAAATCTATGCTGACGCG ACAGGAAATCGCTCGCCAAGCACCCCAGTCCTCGTTTTGGTCCATGGTGGTTTCTTGTGCAAAGGCGCATTTAAT CCCATCTTCGACGATCCTAAATGGACCTCCAATCTATTCTTAGTGCGGTACGATGCCCGTGGACATGGTAGAAGC GGCAAACCGGACACTGAGGAAGCCTGGGAATCCAAACGGTTTTCGGAAGATTTTGAAGCTGTTTGCAGAGAATTC GAAGTGAAAGAAGCATATGTCTTGGGATGGAGTGTCGGCGCCGCTGTGCTCGCTGATATCACGGCCTACACCACT CCAGTTAAGATGCTTGGCTTCATTAATGTCGCAGGACTTATATACGTGAACCCCTCGGTCAATTCACGCGTAGGT AGTCGAATGTCACGTGAATGGGGGCCCCCATTCTTGTTCCCTCCTTCCGAAGATGCCCTCCAAGAATCTTGTGCT TATTTCCTTCGAATATGCTCCGAAGAACTCTCCCCAGAGCTCTTTCGCATTTTATTGGAAGGAATGCTCATGCAG TCGCGCGGAATAGCGAAGCGGGTTTGTTCAAGAAAACAGAATCCTGAGAAGATGTTGCAGGAGGCGCGAGGCGGG AGAATTCCACTCCTGGCCATCAGCGGTTTAAAAGACAAAGCATTGATTACTGAGAAATTAAAAGGAGAGTTGGAA GACTTGGGATGGAAGAGGATGACCTATCGGTATTTACAAGACGCGGACCATATGCCTTGGGTGTCTTGTGCAGAA GAGTTTAGAGAAATTGTGTTGGCATGGATAAAGGAGTTAACACCATAA |
| Gene | >Agabi119p4|568850 ATGACCAAAGACTTGGAAGTAAATACCTCTCGCTTCGTGAAATCAGCCGATGGCACGGAAATCTATGCTGACGCG ACAGGAAATCGCTCGCCAAGCACCCCAGTCCTCGTTTTGGTCCATGGTGGTTTCTTGTGCAAAGGCGCATTTAAT CCCATCTTCGACGATCCTAAATGGACCTCCAATCTATTCTTAGTAAGCCAAGTCGGCAGCTTTGTGAACTTGACC GAAACTCATGATAGTGACAGGTGCGGTACGATGCCCGTGGACATGGTAGAAGCGGCAAACCGGACACTGAGGAAG CCTGGGAATCCAAACGGTTTTCGGAAGATTTTGAAGCTGTTTGCAGAGAATTCGAAGTGAAAGAAGCATATGTCT TGGGATGGAGTGTCGGCGGTGCGCCATTTTCTTTCCTCGATACCACTAGACGCGGCTCTGATGACTTTTCAGCCG CTGTGCTCGCTGATATCACGGCCTACACCACTCCAGTTAAGATGCTTGGCTTCATTAATGTCGCAGGACTTATAT ACGTGAACCCCTCGGTCAATTCACGCGTAGGTAGTCGAATGTCACGTGAATGGGGGCCCCCATTCTTGTTCCCTC CTTCCGAAGATGCCCTCCAAGAATCTTGTGCTTATTTCCTTCGAATATGCTCCGAAGAACTCTCCCCAGAGCTCT TTCGCATTTTATTGGAAGGAATGCTCATGCAGTCGCGCGGAATAGCGAAGCGGGTTTGTTCAAGAAAACAGAATC CTGAGAAGATGTTGCAGGAGGCGCGAGGCGGGAGAATTCCACTCCTGGCCATCAGCGGTTTAAAAGACAAAGCAT TGATTACTGAGAAATTAAAAGGAGAGTTGGAAGACTTGGGATGGAAGAGGATGACCTATCGGTATTTACAAGACG CGGACCATATGCCTTGGGTGTCTTGTGCAGAAGAGTTTAGAGAAATTGTGTTGGCATGGATAAAGGAGTTAACAC CATAA |