Fungal Genomics

General Properties

Protein ID	Agabi119p4|567650
Gene name
Location	scaffold_01a:3161952..3162243
Strand	-
Gene length (bp)	291
Transcript length (bp)	291
Coding sequence length (bp)	291
Protein length (aa)	97

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

SignalP signal predicted	Location	Score
Yes	1 - 19	0.999741

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID	5
Orthogroup	7593
Change Orthofinder run	5: Agaricus - all strains

Species	Protein ID
Agaricus bisporus var bisporus H39	AgabiH39|227000
Agaricus bisporus var bisporus H97	AgabiH97|013640
Agaricus bisporus var burnettii H119p4	Agabi119p4|567650 (this protein)

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Agabi119p4|567650 MTNSLLLVLYFAIPVMIYAAPQLNTGNVVGGLTIGGLGGGSNGVLGSVSNTISGGGNGGLGGTTGTVTNGITRGG LLGRSQNAAEKLEGLGGSDCT*
Coding	>Agabi119p4|567650 ATGACCAATAGTCTCCTGCTAGTCCTTTATTTCGCTATTCCCGTCATGATCTACGCCGCTCCGCAACTCAACACT GGTAATGTAGTAGGAGGGCTGACCATTGGAGGACTTGGAGGTGGCTCAAATGGAGTGCTCGGATCGGTTTCAAAC ACCATCAGTGGTGGAGGTAATGGGGGCCTTGGGGGCACCACAGGCACTGTTACAAATGGAATTACTCGTGGTGGT CTTCTCGGACGATCCCAAAATGCCGCTGAAAAGTTGGAGGGCCTTGGTGGAAGCGATTGTACCTAG
Transcript	>Agabi119p4|567650 ATGACCAATAGTCTCCTGCTAGTCCTTTATTTCGCTATTCCCGTCATGATCTACGCCGCTCCGCAACTCAACACT GGTAATGTAGTAGGAGGGCTGACCATTGGAGGACTTGGAGGTGGCTCAAATGGAGTGCTCGGATCGGTTTCAAAC ACCATCAGTGGTGGAGGTAATGGGGGCCTTGGGGGCACCACAGGCACTGTTACAAATGGAATTACTCGTGGTGGT CTTCTCGGACGATCCCAAAATGCCGCTGAAAAGTTGGAGGGCCTTGGTGGAAGCGATTGTACCTAG
Gene	>Agabi119p4|567650 ATGACCAATAGTCTCCTGCTAGTCCTTTATTTCGCTATTCCCGTCATGATCTACGCCGCTCCGCAACTCAACACT GGTAATGTAGTAGGAGGGCTGACCATTGGAGGACTTGGAGGTGGCTCAAATGGAGTGCTCGGATCGGTTTCAAAC ACCATCAGTGGTGGAGGTAATGGGGGCCTTGGGGGCACCACAGGCACTGTTACAAATGGAATTACTCGTGGTGGT CTTCTCGGACGATCCCAAAATGCCGCTGAAAAGTTGGAGGGCCTTGGTGGAAGCGATTGTACCTAG