Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|563050
Gene name
Locationscaffold_01a:2614175..2616106
Strand+
Gene length (bp)1931
Transcript length (bp)1266
Coding sequence length (bp)1266
Protein length (aa) 422

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00704 Glyco_hydro_18 Glycosyl hydrolases family 18 2.6E-25 36 304

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P29026|CHI1_RHIOL Chitinase 1 OS=Rhizopus oligosporus GN=CHI1 PE=1 SV=1 35 326 7.0E-90
sp|P29027|CHI2_RHIOL Chitinase 2 OS=Rhizopus oligosporus GN=CHI2 PE=1 SV=1 35 316 4.0E-88
sp|P29025|CHI1_RHINI Chitinase 1 OS=Rhizopus niveus GN=CHI1 PE=3 SV=1 35 316 4.0E-84
sp|P29029|CHIT_YEAST Endochitinase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CTS1 PE=1 SV=2 10 320 6.0E-74
sp|P40954|CHI3_CANAL Chitinase 3 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CHT3 PE=1 SV=2 10 309 2.0E-73
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Swissprot ID Swissprot Description Start End E-value
sp|P29026|CHI1_RHIOL Chitinase 1 OS=Rhizopus oligosporus GN=CHI1 PE=1 SV=1 35 326 7.0E-90
sp|P29027|CHI2_RHIOL Chitinase 2 OS=Rhizopus oligosporus GN=CHI2 PE=1 SV=1 35 316 4.0E-88
sp|P29025|CHI1_RHINI Chitinase 1 OS=Rhizopus niveus GN=CHI1 PE=3 SV=1 35 316 4.0E-84
sp|P29029|CHIT_YEAST Endochitinase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CTS1 PE=1 SV=2 10 320 6.0E-74
sp|P40954|CHI3_CANAL Chitinase 3 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CHT3 PE=1 SV=2 10 309 2.0E-73
sp|D4B4X4|CHI33_ARTBC Class III chitinase ARB_03514 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_03514 PE=1 SV=2 34 323 2.0E-62
sp|P40953|CHI2_CANAL Chitinase 2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CHT2 PE=1 SV=1 34 317 8.0E-61
sp|Q12713|CHI33_TRIHA Endochitinase 33 OS=Trichoderma harzianum GN=chit33 PE=1 SV=1 22 320 7.0E-60
sp|P19172|CHIA_ARATH Acidic endochitinase OS=Arabidopsis thaliana GN=CHIB1 PE=2 SV=2 36 302 2.0E-56
sp|Q5AAH2|CHI1_CANAL Chitinase 1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CHT1 PE=1 SV=1 33 326 3.0E-55
sp|P36910|CHIE_BETVU Acidic endochitinase SE2 OS=Beta vulgaris GN=SE2 PE=1 SV=1 16 301 4.0E-55
sp|P29060|CHIA_TOBAC Acidic endochitinase OS=Nicotiana tabacum PE=1 SV=1 32 301 4.0E-55
sp|P46876|CHI1_CANAX Chitinase 1 OS=Candida albicans GN=CHT1 PE=3 SV=2 33 325 4.0E-55
sp|P51614|CHIT3_VITVI Acidic endochitinase OS=Vitis vinifera GN=CHIT3 PE=2 SV=1 19 302 5.0E-54
sp|P23472|CHLY_HEVBR Hevamine-A OS=Hevea brasiliensis PE=1 SV=2 36 302 5.0E-54
sp|P29024|CHIA_PHAAN Acidic endochitinase OS=Phaseolus angularis PE=2 SV=1 19 302 1.0E-53
sp|P36908|CHIA_CICAR Acidic endochitinase OS=Cicer arietinum PE=2 SV=1 36 302 2.0E-50
sp|P17541|CHIA_CUCSA Acidic endochitinase OS=Cucumis sativus PE=1 SV=1 28 301 9.0E-49
sp|P29061|CHIB_TOBAC Basic endochitinase OS=Nicotiana tabacum PE=2 SV=1 32 302 1.0E-48
sp|E9ENC6|CHI3_METRA Endochitinase 3 OS=Metarhizium robertsii (strain ARSEF 23 / ATCC MYA-3075) GN=chi3 PE=3 SV=1 13 320 2.0E-48
sp|P54197|CHI2_COCP7 Endochitinase 2 OS=Coccidioides posadasii (strain C735) GN=CTS2 PE=3 SV=2 34 309 6.0E-46
sp|Q1EAR5|CHI2_COCIM Endochitinase 2 OS=Coccidioides immitis (strain RS) GN=CTS2 PE=3 SV=2 34 309 1.0E-45
sp|Q873Y0|CHIA1_ASPFM Endochitinase A1 OS=Neosartorya fumigata GN=chiA1 PE=1 SV=1 8 310 1.0E-43
sp|Q6QDR4|CHI3_METAN Endochitinase 3 (Fragment) OS=Metarhizium anisopliae GN=chi3 PE=1 SV=1 36 312 2.0E-43
sp|E9F9R9|CHI2_METRA Endochitinase 2 OS=Metarhizium robertsii (strain ARSEF 23 / ATCC MYA-3075) GN=chi2 PE=3 SV=2 38 320 3.0E-43
sp|Q4U4T0|CHI2_METAN Endochitinase 2 OS=Metarhizium anisopliae GN=chi2 PE=1 SV=1 38 306 1.0E-42
sp|Q4WEP7|CHIA1_ASPFU Endochitinase A1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=chiA1 PE=3 SV=1 23 310 1.0E-42
sp|A2QUQ2|CHIA1_ASPNC Endochitinase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=ctcA PE=2 SV=1 8 309 3.0E-41
sp|G5EB30|CHIA1_EMENI Endochitinase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=chiA PE=1 SV=1 8 310 2.0E-40
sp|Q92223|CHIA1_EMEND Endochitinase A OS=Emericella nidulans GN=chiA PE=2 SV=3 8 310 2.0E-40
sp|Q9C105|YKT4_SCHPO Chitinase-like protein PB1E7.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAPB1E7.04c PE=3 SV=1 7 318 7.0E-40
sp|D4AT07|CHI1_ARTBC Probable endochitinase ARB_07371 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_07371 PE=3 SV=1 33 303 3.0E-39
sp|P49347|CONB_CANEN Concanavalin B OS=Canavalia ensiformis PE=1 SV=1 26 302 3.0E-28
sp|Q8L5C6|XIP1_WHEAT Xylanase inhibitor protein 1 OS=Triticum aestivum GN=XIPI PE=1 SV=2 23 302 1.0E-24
sp|Q7GCM7|XIP1_ORYSJ Xylanase inhibitor protein 1 OS=Oryza sativa subsp. japonica GN=RIXI PE=1 SV=1 27 302 9.0E-24
sp|Q53NL5|XIP2_ORYSJ Xylanase inhibitor protein 2 OS=Oryza sativa subsp. japonica GN=Chib3H-h PE=1 SV=1 35 302 9.0E-22
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GO

GO Term Description Terminal node
GO:0005975 carbohydrate metabolic process Yes
GO:0044238 primary metabolic process No
GO:0071704 organic substance metabolic process No
GO:0008150 biological_process No
GO:0008152 metabolic process No

Deeploc

Deeploc data not available for this genome

SignalP

SignalP signal predicted Location Score
Yes 1 - 27 0.732676

Transmembrane Domains

Domain # Start End Length
1 7 29 22

Transcription Factor Class

(None)

CAZymes

CAZyme category E-value Start End
GH18 1.3E-25 35 267

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID5
Orthogroup7571
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|011110
Agaricus bisporus var bisporus H97 AgabiH97|011110
Agaricus bisporus var burnettii H119p4 Agabi119p4|563050 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|563050
MSLHWGVRLILYALCILGLIDLPCVVAFANNRSDNLAVYWGQDAAGHQRELSFYCQDDTIDIIPLAFLYVFFGEG
GKPVINLANICSPGGKEFANSDLVDCSFMASDIKQCQAKGKKITLSLGGATAKVGFKSKSQAEDFAKDVWDMFLG
GRSNTRPFGQATLDGIDLDIENGSSSYYSDFVNKIRSLSKGLKKRYYITAAPQCPFPDAKVGDALNKADFDAVYV
QFYNNYCEASSPSAFNFDTWDEWAKTKSPNPDVKVYIGAPAGPKAASSGYVDANALIKVAKDARKKYSSFGGVML
WDADMAYNNDKFHVKIKKGISTGPPTIDEDDRADEDDRADDDRTDDDDRTDDDDRTNDDDRVDDNDRVDDDDRAS
VSPAKLNDFEDPRATARVKRPSITINQRDVEPTNMQPRVSSRWFRL*
Coding >Agabi119p4|563050
ATGAGTCTCCACTGGGGAGTTAGACTCATCCTTTATGCCCTATGCATACTTGGGTTGATCGACTTGCCCTGCGTA
GTTGCCTTCGCCAACAATCGTTCGGACAATCTTGCCGTGTACTGGGGGCAAGATGCTGCAGGTCACCAACGGGAA
TTGTCTTTCTATTGCCAGGATGATACTATTGATATCATTCCCCTCGCCTTCCTTTATGTGTTCTTCGGAGAGGGT
GGGAAGCCCGTAATCAACTTGGCAAATATATGCTCCCCGGGCGGAAAGGAATTTGCTAATTCCGACCTAGTGGAT
TGCTCTTTCATGGCTTCAGACATTAAGCAATGTCAGGCCAAAGGGAAAAAAATCACGCTCAGCCTTGGTGGCGCT
ACTGCCAAAGTTGGATTCAAGAGTAAATCTCAGGCGGAAGACTTCGCCAAGGATGTGTGGGATATGTTCTTAGGA
GGACGGAGCAATACACGTCCATTTGGCCAGGCCACTCTCGATGGCATTGACTTGGATATCGAAAACGGCTCTTCG
TCTTACTATTCAGACTTCGTTAACAAAATTCGTTCCCTGTCAAAGGGACTCAAGAAGCGTTATTATATCACAGCT
GCACCCCAATGTCCTTTCCCAGACGCCAAGGTGGGAGATGCCCTCAATAAGGCCGACTTTGATGCTGTCTATGTC
CAATTTTACAATAATTACTGTGAAGCATCAAGCCCATCTGCGTTCAACTTCGACACATGGGACGAATGGGCCAAA
ACAAAATCACCGAATCCGGACGTTAAGGTCTACATTGGCGCACCAGCTGGACCCAAAGCCGCGAGCTCAGGTTAT
GTTGATGCCAACGCTCTCATCAAAGTTGCTAAAGACGCTAGAAAAAAATACTCCTCCTTTGGAGGTGTGATGCTT
TGGGATGCTGATATGGCCTACAATAATGACAAATTTCACGTAAAGATAAAGAAAGGGATATCGACAGGACCACCC
ACGATAGATGAGGACGATAGGGCAGATGAGGACGATAGGGCAGACGACGATAGAACAGATGACGACGATAGAACA
GATGACGACGATAGAACAAATGATGACGATAGGGTGGATGATAACGATAGGGTGGATGACGACGATAGGGCAAGC
GTTTCACCAGCCAAATTGAATGATTTCGAAGACCCTCGAGCAACAGCCCGGGTGAAGCGGCCAAGCATAACGATC
AACCAACGAGACGTAGAGCCTACAAACATGCAGCCAAGAGTGTCGTCTCGTTGGTTCCGCTTATGA
Transcript >Agabi119p4|563050
ATGAGTCTCCACTGGGGAGTTAGACTCATCCTTTATGCCCTATGCATACTTGGGTTGATCGACTTGCCCTGCGTA
GTTGCCTTCGCCAACAATCGTTCGGACAATCTTGCCGTGTACTGGGGGCAAGATGCTGCAGGTCACCAACGGGAA
TTGTCTTTCTATTGCCAGGATGATACTATTGATATCATTCCCCTCGCCTTCCTTTATGTGTTCTTCGGAGAGGGT
GGGAAGCCCGTAATCAACTTGGCAAATATATGCTCCCCGGGCGGAAAGGAATTTGCTAATTCCGACCTAGTGGAT
TGCTCTTTCATGGCTTCAGACATTAAGCAATGTCAGGCCAAAGGGAAAAAAATCACGCTCAGCCTTGGTGGCGCT
ACTGCCAAAGTTGGATTCAAGAGTAAATCTCAGGCGGAAGACTTCGCCAAGGATGTGTGGGATATGTTCTTAGGA
GGACGGAGCAATACACGTCCATTTGGCCAGGCCACTCTCGATGGCATTGACTTGGATATCGAAAACGGCTCTTCG
TCTTACTATTCAGACTTCGTTAACAAAATTCGTTCCCTGTCAAAGGGACTCAAGAAGCGTTATTATATCACAGCT
GCACCCCAATGTCCTTTCCCAGACGCCAAGGTGGGAGATGCCCTCAATAAGGCCGACTTTGATGCTGTCTATGTC
CAATTTTACAATAATTACTGTGAAGCATCAAGCCCATCTGCGTTCAACTTCGACACATGGGACGAATGGGCCAAA
ACAAAATCACCGAATCCGGACGTTAAGGTCTACATTGGCGCACCAGCTGGACCCAAAGCCGCGAGCTCAGGTTAT
GTTGATGCCAACGCTCTCATCAAAGTTGCTAAAGACGCTAGAAAAAAATACTCCTCCTTTGGAGGTGTGATGCTT
TGGGATGCTGATATGGCCTACAATAATGACAAATTTCACGTAAAGATAAAGAAAGGGATATCGACAGGACCACCC
ACGATAGATGAGGACGATAGGGCAGATGAGGACGATAGGGCAGACGACGATAGAACAGATGACGACGATAGAACA
GATGACGACGATAGAACAAATGATGACGATAGGGTGGATGATAACGATAGGGTGGATGACGACGATAGGGCAAGC
GTTTCACCAGCCAAATTGAATGATTTCGAAGACCCTCGAGCAACAGCCCGGGTGAAGCGGCCAAGCATAACGATC
AACCAACGAGACGTAGAGCCTACAAACATGCAGCCAAGAGTGTCGTCTCGTTGGTTCCGCTTATGA
Gene >Agabi119p4|563050
ATGAGTCTCCACTGGGGAGTTAGACTCATCCTTTATGCCCTATGCATACTTGGGTTGATCGACTTGCCCTGCGTA
GTTGCCTTCGCCAACAATCGTTCGGACAATGTAAGTGTTCATTTGACTCAGAATGATGAATGTTGTAACCAAGTC
TATGCCACAGCTTGCCGTGTAAGCAATACGTTTCCGATGCTAATTTCGCCATGATTTTGATAAGGCTCCAGGTAC
TGGGGGCAAGATGCTGCAGGTCACCAACGGGAGTAAGTAACTGTCACCAGTATCAGATATTCGTGATAACATACG
GTTGCCCCTAGATTGTCTTTCTATTGCCAGGATGATACTATTGATATCATTCCCCTCGCCTTCCTTTATGTGTTC
TTCGGAGAGGGTGGGAAGCCCGTAATCAACTTGGCAAATGTGCGTAGTTGCATATTCTACTTGCAGACACACCAT
GCTCATGAGGGTTGTTCAAAGATATGCTCCCCGGGCGGAAAGGAATTTGCTAATTCCGACCTAGTGGATTGCTCT
TTCATGGCTTCAGACATTAAGCAATGTCAGGCCAAAGGGAAAAAAATCACGCTCAGCCTTGGTGGCGCTACTGCC
AAAGTTGGATTCAAGAGTAAATCTCAGGCGGAAGACTTCGCCAAGGATGTGTGGGATATGTTCTTAGGTATGAAT
TCATTCTCACGCATTTGTTTGATATAAGCGTAATTGAATGAATATAGGAGGACGTGAGTATTTATTGGCATAAAA
ACCGCAGAAGCGTTTCGGGGTGACCTGATTGAAACCAAGGGAGCAATACACGTCCATTTGGCCAGGCCACTCTCG
ATGGGTACGCAACCATCGATTTACTTATGATTGTTTTTTTCATTCGTCTTTTAGCATTGACTTGGATATCGAAAA
CGGCTCTTCGTCTTACTATTCAGACTTCGTTAACAAAATTCGTTCCCTGTCAAAGGGACTCAAGAAGCGGTATGG
CGAGAACGCAACGTTTCCATTTTTGTTCACTCACGCAACATGTAGTTATTATATCACAGCTGCACCCCAATGTCC
TTTCCCAGACGCCAAGGTGGGAGATGCCCTCAATAAGGCCGACTTTGATGCTGTCTATGTCCAATTTTGTAATGG
TTTATTTTTCGAACGGGCTTCATGTGATTCTAATTTTCTCATCAGACAATAATTACTGTGAAGCATCAAGCCCAT
CTGTACGTCTAGTGCTATTAATATCTGACTTTTAAACGCAAAGCTGACGCGATAAGGCGTTCAACTTCGACACAT
GGTACTGTCCGCGATTGAGTCTGTTACTGAGCCAAATTTACTCACCTTGAGTTTCCAGGGACGAATGGGCCAAAA
CAAAATCACCGAATCCGGACGTTAAGGTCTACATTGGCGCACCAGCTGGACCCAAAGCCGCGAGCTCAGGTTATG
TTGATGCCAACGCTCTCATCAAAGTTGCTAAAGACGCTAGAAAAAAATACTCCTCCTTTGGAGGTGTGATGCTTT
GGGATGCTGATATGGCCTACAGTGCGTTTATCATATATAATTGCAGAAAATGGTGGAATCTGGTCGCTCAACATT
AATTCCGTACAGATAATGACAAATTTCACGTAAAGATAAAGAAAGGGATATCGACAGGACCACCCACGATAGATG
AGGACGATAGGGCAGATGAGGACGATAGGGCAGACGACGATAGAACAGATGACGACGATAGAACAGATGACGACG
ATAGAACAAATGATGACGATAGGGTGGATGATAACGATAGGGTGGATGACGACGATAGGGCAAGCGTTTCACCAG
CCAAATTGAATGATTTCGAAGACCCTCGAGCAACAGCCCGGGTGAAGCGGCCAAGCATAACGATCAACCAACGAG
ACGTAGAGCCTACAAACATGCAGCCAAGAGTGTCGTCTCGTTGGTTCCGCTTATGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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