© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Agabi119p4|561900 |
| Gene name | |
| Location | scaffold_01a:2219394..2220921 |
| Strand | - |
| Gene length (bp) | 1527 |
| Transcript length (bp) | 1224 |
| Coding sequence length (bp) | 1224 |
| Protein length (aa) | 408 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF12706 | Lactamase_B_2 | Beta-lactamase superfamily domain | 3.9E-17 | 88 | 220 |
| PF00753 | Lactamase_B | Metallo-beta-lactamase superfamily | 1.7E-05 | 87 | 146 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O74545|YCV6_SCHPO | Putative hydrolase C777.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC777.06c PE=4 SV=1 | 25 | 350 | 2.0E-56 |
| sp|Q7MUY1|LIPB_PORGI | Octanoyltransferase OS=Porphyromonas gingivalis (strain ATCC BAA-308 / W83) GN=lipB PE=3 SV=1 | 24 | 225 | 2.0E-10 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 20 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Agabi119p4|561900 MEFPSTSMRPDIASSPTESNEPAIELVFLGTGTSSSTPHVDCLTADFTTRPPCKTCLSTLTPDGKKNIRRNTGAV VRTKAKDGRSVTVVIDAGKTFQAAAVEWFPKFGLRRIDALLITHAHADAINGLDDLRGWTLNKAIQSHIDVYLSQ ETFIELQRSFPYLISKEFASGGGDVPAFRYHIINDGEPFEIEDTGINVTPFAVHHGRIFSRLPPAGYVITPTATL PSTPNKSDIRALSPEPGEQKFGECVAKEQPEATIHPLLCFGFKIQEQLVYISDVSHIPDHVWGTLQSKRGDSAQQ LPVLVLDCLRLRPFISHLGIADALMIAKKIGATKTYLTGFSHEVTHEEYVTITEAIGGKLKNKNDLTESEKTGLE LVQGGGQIWVRPAHDGLRLIINKDGSVYDESY* |
| Coding | >Agabi119p4|561900 ATGGAATTCCCTTCAACTTCTATGCGACCCGATATCGCAAGCTCTCCCACCGAATCGAATGAACCTGCCATTGAG CTCGTCTTCCTCGGTACTGGGACATCTTCAAGTACACCTCATGTCGACTGTCTGACCGCCGACTTCACAACACGT CCACCGTGCAAAACATGTCTTTCGACACTTACTCCCGATGGCAAAAAAAACATTCGACGGAATACTGGTGCAGTG GTTAGAACGAAAGCAAAAGATGGTCGCTCGGTGACCGTTGTTATCGATGCCGGCAAGACTTTTCAGGCTGCGGCA GTCGAGTGGTTCCCCAAATTTGGTCTGCGAAGGATCGATGCTCTATTGATAACTCATGCTCATGCCGACGCTATT AATGGACTTGATGACCTCAGAGGCTGGACCTTGAACAAAGCAATTCAATCCCATATTGATGTCTACTTGTCGCAA GAAACGTTTATTGAGCTACAGAGATCGTTTCCGTACCTCATATCCAAAGAATTCGCGTCGGGCGGAGGAGATGTC CCAGCCTTCCGGTATCACATCATCAATGATGGTGAGCCATTCGAGATAGAGGACACTGGTATCAATGTCACGCCT TTTGCTGTTCATCACGGGCGCATCTTCTCAAGACTGCCACCTGCAGGTTATGTTATCACTCCGACTGCGACTCTA CCATCTACACCAAACAAGTCGGATATCAGAGCACTTTCTCCGGAGCCGGGGGAACAGAAGTTCGGAGAGTGTGTG GCAAAGGAGCAACCTGAAGCGACTATACACCCCTTACTGTGCTTTGGATTCAAGATTCAAGAGCAGTTGGTGTAC ATCTCGGATGTCTCCCATATACCAGATCATGTTTGGGGCACGTTGCAGAGTAAACGGGGGGATAGTGCACAACAA TTGCCAGTTCTAGTGCTGGATTGTCTGCGTCTGCGTCCCTTTATCTCACACCTCGGAATTGCAGATGCATTGATG ATCGCGAAGAAGATTGGGGCGACGAAGACTTACTTGACTGGTTTCAGCCATGAGGTCACTCACGAAGAATACGTG ACGATCACCGAAGCTATTGGTGGGAAGTTGAAGAATAAAAACGATTTGACCGAGTCGGAAAAGACTGGCCTCGAA CTCGTTCAGGGCGGAGGGCAAATCTGGGTTAGACCAGCGCATGATGGGCTCAGACTGATCATAAACAAAGATGGT AGTGTGTACGATGAAAGCTATTGA |
| Transcript | >Agabi119p4|561900 ATGGAATTCCCTTCAACTTCTATGCGACCCGATATCGCAAGCTCTCCCACCGAATCGAATGAACCTGCCATTGAG CTCGTCTTCCTCGGTACTGGGACATCTTCAAGTACACCTCATGTCGACTGTCTGACCGCCGACTTCACAACACGT CCACCGTGCAAAACATGTCTTTCGACACTTACTCCCGATGGCAAAAAAAACATTCGACGGAATACTGGTGCAGTG GTTAGAACGAAAGCAAAAGATGGTCGCTCGGTGACCGTTGTTATCGATGCCGGCAAGACTTTTCAGGCTGCGGCA GTCGAGTGGTTCCCCAAATTTGGTCTGCGAAGGATCGATGCTCTATTGATAACTCATGCTCATGCCGACGCTATT AATGGACTTGATGACCTCAGAGGCTGGACCTTGAACAAAGCAATTCAATCCCATATTGATGTCTACTTGTCGCAA GAAACGTTTATTGAGCTACAGAGATCGTTTCCGTACCTCATATCCAAAGAATTCGCGTCGGGCGGAGGAGATGTC CCAGCCTTCCGGTATCACATCATCAATGATGGTGAGCCATTCGAGATAGAGGACACTGGTATCAATGTCACGCCT TTTGCTGTTCATCACGGGCGCATCTTCTCAAGACTGCCACCTGCAGGTTATGTTATCACTCCGACTGCGACTCTA CCATCTACACCAAACAAGTCGGATATCAGAGCACTTTCTCCGGAGCCGGGGGAACAGAAGTTCGGAGAGTGTGTG GCAAAGGAGCAACCTGAAGCGACTATACACCCCTTACTGTGCTTTGGATTCAAGATTCAAGAGCAGTTGGTGTAC ATCTCGGATGTCTCCCATATACCAGATCATGTTTGGGGCACGTTGCAGAGTAAACGGGGGGATAGTGCACAACAA TTGCCAGTTCTAGTGCTGGATTGTCTGCGTCTGCGTCCCTTTATCTCACACCTCGGAATTGCAGATGCATTGATG ATCGCGAAGAAGATTGGGGCGACGAAGACTTACTTGACTGGTTTCAGCCATGAGGTCACTCACGAAGAATACGTG ACGATCACCGAAGCTATTGGTGGGAAGTTGAAGAATAAAAACGATTTGACCGAGTCGGAAAAGACTGGCCTCGAA CTCGTTCAGGGCGGAGGGCAAATCTGGGTTAGACCAGCGCATGATGGGCTCAGACTGATCATAAACAAAGATGGT AGTGTGTACGATGAAAGCTATTGA |
| Gene | >Agabi119p4|561900 ATGGAATTCCCTTCAACTTCTATGCGACCCGATATCGCAAGCTCTCCCACCGAATCGAATGAACCTGCCATTGAG CTCGTCTTCCTCGGTACTGGGACATCTTCAAGTACACCTCATGTCGACTGTCTGACCGCCGACTTCACAACACGT CCACCGTGCAAAACATGTCTTTCGACACTTACTCCCGATGGCAAAAAAAACATTCGACGGAATACTGGTGCAGTG GTTAGAACGAAAGCAAAAGATGGTCGCTCGGTGTATGTGATTTTTTTCTGGAAGTCTAGCTCTAGCGCTATGTTA GAGGGACCTTGATATAGATCGTGTTTATGGTCTCTTCCAGGACCGTTGTTATCGATGCCGGCAAGACTTTTCAGG CTGCGGCAGTCGAGTGGTTCCCCAAATTTGGTCTGCGAAGGATCGATGCTCTATTGATAACTCATGCTCATGCCG ACGGTAAGCACTCGGCCGAGTATATTATACATGTTTTCGTTAAATCGCGTTTTCGGGTCAGCTATTAATGGACTT GATGACCTCAGAGGTGTGTGGAATTATCGTATTATCCCTTCCTAAATGAATGCTGATTTACATCAGGCTGGACCT TGAACAAAGCAATTCAATCCCATATTGATGTCTACTTGTCGCAAGAAACGTTTATTGAGCTACAGAGATCGTTTC CGTACCTCATATCCAAAGAATTCGCGTCGGGCGGAGGAGATGTACGTTGTTCTTCGAATTATGGGAACACCAACT TGACAGATAATCAAGGTCCCAGCCTTCCGGTATCACATCATCAATGATGGTGAGCCATTCGAGATAGAGGACACT GGTATCAATGTCACGCCTTTTGCTGGTCAGATTTCTAGTCATAGGTTGACAAGGTGCTGAGATAACTCACGGACT TTTCGTGTAGTTCATCACGGGCGCATCTTCTCAAGACTGCCACCTGCAGGTTATGTTATCACTCCGACTGCGACT CTACCATCTACACCAAACAAGTCGGATATCAGAGCACTTTCTCCGGAGCCGGGGGAACAGAAGTTCGGAGAGTGT GTGGCAAAGGAGCAACCTGAAGCGACTATACACCCCTTACTGTGCTTTGGATTCAAGATTCAAGAGCAGTTGGTG TACATCTCGGATGTCTCCCATATACCAGATCATGTTTGGGGCACGTTGCAGAGTAAACGGGGGGATAGTGCACAA CAATTGCCAGTTCTAGTGCTGGATTGTCTGCGTCTGCGTCCCTTTATCTCACACCTCGGAATTGCAGATGCATTG ATGATCGCGAAGAAGATTGGGGCGACGAAGACTTACTTGACTGGTTTCAGCCATGAGGTCACTCACGAAGAATAC GTGACGATCACCGAAGCTATTGGTGGGAAGTTGAAGAATAAAAACGATTTGACCGAGTCGGAAAAGACTGGCCTC GAACTCGTTCAGGGCGGAGGGCAAATCTGGGTTAGACCAGCGCATGATGGGCTCAGACTGATCATAAACAAAGAT GGTAGTGTGTACGATGAAAGCTATTGA |