© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Agabi119p4|559150 |
| Gene name | |
| Location | scaffold_01a:992307..993150 |
| Strand | - |
| Gene length (bp) | 843 |
| Transcript length (bp) | 690 |
| Coding sequence length (bp) | 690 |
| Protein length (aa) | 230 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13472 | Lipase_GDSL_2 | GDSL-like Lipase/Acylhydrolase family | 7.5E-12 | 6 | 195 |
| PF00657 | Lipase_GDSL | GDSL-like Lipase/Acylhydrolase | 5.0E-06 | 13 | 202 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q00017|RHA1_ASPAC | Rhamnogalacturonan acetylesterase OS=Aspergillus aculeatus GN=rha1 PE=1 SV=1 | 18 | 215 | 7.0E-62 |
| sp|Q5BAA2|RHA1_EMENI | Rhamnogalacturonan acetylesterase OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=AN2528 PE=1 SV=1 | 5 | 213 | 1.0E-61 |
| sp|O31528|RHGT2_BACSU | Probable rhamnogalacturonan acetylesterase YesY OS=Bacillus subtilis (strain 168) GN=yesY PE=1 SV=1 | 15 | 206 | 2.0E-17 |
| sp|O31523|RHGT1_BACSU | Rhamnogalacturonan acetylesterase RhgT OS=Bacillus subtilis (strain 168) GN=rhgT PE=1 SV=1 | 15 | 68 | 2.0E-07 |
| sp|P42304|YXIM_BACSU | Uncharacterized esterase YxiM OS=Bacillus subtilis (strain 168) GN=yxiM PE=1 SV=2 | 15 | 200 | 2.0E-07 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016788 | hydrolase activity, acting on ester bonds | Yes |
| GO:0003674 | molecular_function | No |
| GO:0016787 | hydrolase activity | No |
| GO:0003824 | catalytic activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 14 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Agabi119p4|559150 MARGGGGSAAPGTDGWGQYLGQYLTVPVVNRAIAGRSSRSYTDEGRFDALLNTVRPGDFVIIEFGHNDGMSGNVD NGRQCAFGDGYNTTATVSNSAGQSLVIHTFPYYIQNAVVAIQAKGAIPIISSQTPSNDWSNGRIVAGPRFVGYAQ TAANRTGATYVDHYAYVAQAYNKLGQTATTAFYPGDHTHTSPAGANVVAQAFMRGILCGNSSLKSKANSAGQSVP NGCL* |
| Coding | >Agabi119p4|559150 ATGGCCCGCGGTGGAGGAGGCTCTGCCGCACCTGGGACAGATGGCTGGGGACAGTACCTGGGACAGTATCTAACA GTTCCTGTCGTCAATCGCGCTATTGCTGGCCGGTCTTCGAGATCATATACTGACGAGGGGCGCTTTGATGCTCTC TTGAATACAGTGAGACCGGGTGACTTTGTAATTATCGAATTTGGCCATAACGATGGGATGTCTGGAAATGTCGAC AATGGAAGGCAGTGTGCTTTCGGAGACGGGTATAACACTACTGCGACAGTGTCCAACTCTGCGGGACAATCCCTC GTAATTCATACCTTCCCCTATTACATCCAGAATGCAGTTGTTGCAATCCAGGCCAAAGGCGCAATCCCTATAATT TCTTCGCAAACCCCTAGCAATGACTGGTCCAATGGTCGCATAGTCGCAGGGCCTCGGTTTGTGGGATACGCACAA ACTGCGGCAAATCGTACAGGCGCCACATATGTTGACCATTATGCTTATGTTGCACAAGCATACAACAAACTTGGA CAGACCGCTACGACAGCTTTCTACCCGGGAGACCATACACACACATCACCTGCAGGCGCGAATGTGGTCGCGCAG GCTTTCATGAGAGGGATACTGTGCGGAAATAGCTCGCTGAAATCGAAGGCCAACTCAGCTGGTCAGTCTGTCCCA AATGGGTGTCTGTAG |
| Transcript | >Agabi119p4|559150 ATGGCCCGCGGTGGAGGAGGCTCTGCCGCACCTGGGACAGATGGCTGGGGACAGTACCTGGGACAGTATCTAACA GTTCCTGTCGTCAATCGCGCTATTGCTGGCCGGTCTTCGAGATCATATACTGACGAGGGGCGCTTTGATGCTCTC TTGAATACAGTGAGACCGGGTGACTTTGTAATTATCGAATTTGGCCATAACGATGGGATGTCTGGAAATGTCGAC AATGGAAGGCAGTGTGCTTTCGGAGACGGGTATAACACTACTGCGACAGTGTCCAACTCTGCGGGACAATCCCTC GTAATTCATACCTTCCCCTATTACATCCAGAATGCAGTTGTTGCAATCCAGGCCAAAGGCGCAATCCCTATAATT TCTTCGCAAACCCCTAGCAATGACTGGTCCAATGGTCGCATAGTCGCAGGGCCTCGGTTTGTGGGATACGCACAA ACTGCGGCAAATCGTACAGGCGCCACATATGTTGACCATTATGCTTATGTTGCACAAGCATACAACAAACTTGGA CAGACCGCTACGACAGCTTTCTACCCGGGAGACCATACACACACATCACCTGCAGGCGCGAATGTGGTCGCGCAG GCTTTCATGAGAGGGATACTGTGCGGAAATAGCTCGCTGAAATCGAAGGCCAACTCAGCTGGTCAGTCTGTCCCA AATGGGTGTCTGTAG |
| Gene | >Agabi119p4|559150 ATGGCCCGCGGTGGAGGAGGCTCTGCCGCACCTGGGACAGATGGTAAGTAAGTTCTGGAATGGAATACACACAAT CAGTACTTATATTCTAAAGGCTGGGGACAGTACCTGGGACAGTATCTAACAGTTCCTGTCGTCAATCGCGCTATT GCTGGCCGGTCTTCGAGATCATATACTGACGAGGGGCGCTTTGATGCTCTCTTGAATACAGTGAGACCGGGTGAC TTTGTAATTATCGAATTTGGCCATAACGATGGGATGTCTGGAAATGTCGACAATGGAAGGCAGTGTGCTTTCGGA GACGGGTATAACACTACTGCGACAGTGTCCAACTCTGCGTGAGTTTTTTGCTGTACGCGTGAAAAATATGACGGG CTGAAATTTTGCAAGGGGACAATCCCTCGTAATTCATACCTTCCCCTATTACATCCAGAATGCAGTTGTTGCAAT CCAGGCCAAAGGCGCAATCCCTATAATTTCTTCGCAAACCCCTAGCAATGACTGGTCCAATGGTCGCATAGTCGC AGGGCCTCGGTTTGTGGGATACGCACAAACTGCGGCAAATCGTACAGGCGCCACATATGTTGACCATTATGCTTA TGTTGCACAAGCATACAACAAACTTGGACAGACCGCTACGACAGCTTTCTACCCGGGAGACCATACACACACATC ACCTGCAGGCGCGAATGTGGTCGCGCAGGCTTTCATGAGAGGGATACTGTGCGGAAATAGCTCGCTGAAATCGAA GGCCAACTCAGCTGGTCAGTCTGTCCCAAGTAAGTGGAAATCGAGTACCCTGCACAGATGGATCTGAATATCTTG CCAGATGGGTGTCTGTAG |