Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|553550
Gene name
Locationscaffold_01a:48356..50996
Strand+
Gene length (bp)2640
Transcript length (bp)2085
Coding sequence length (bp)2085
Protein length (aa) 695

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00240 ubiquitin Ubiquitin family 1.4E-18 325 393
PF00627 UBA UBA/TS-N domain 7.2E-10 655 688
PF11976 Rad60-SLD Ubiquitin-2 like Rad60 SUMO-like 2.4E-08 323 392
PF10302 Dsc3_N DSC E3 ubiquitin ligase complex subunit 3, ubiquitin-like domain 4.7E-06 332 404
PF00651 BTB BTB/POZ domain 2.2E-04 31 138

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P48510|DSK2_YEAST Ubiquitin domain-containing protein DSK2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DSK2 PE=1 SV=2 323 691 1.0E-36
sp|Q10169|DSK2_SCHPO Deubiquitination-protection protein dph1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dph1 PE=3 SV=1 321 536 8.0E-33
sp|Q9NIF3|UBQL_DICDI Ubiquilin OS=Dictyostelium discoideum GN=ubqln PE=1 SV=1 323 521 1.0E-20
sp|Q9SII9|DSK2A_ARATH Ubiquitin domain-containing protein DSK2a OS=Arabidopsis thaliana GN=DSK2A PE=1 SV=2 323 519 1.0E-19
sp|Q9SII8|DSK2B_ARATH Ubiquitin domain-containing protein DSK2b OS=Arabidopsis thaliana GN=DSK2B PE=1 SV=1 323 519 8.0E-16
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Swissprot ID Swissprot Description Start End E-value
sp|P48510|DSK2_YEAST Ubiquitin domain-containing protein DSK2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DSK2 PE=1 SV=2 323 691 1.0E-36
sp|Q10169|DSK2_SCHPO Deubiquitination-protection protein dph1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dph1 PE=3 SV=1 321 536 8.0E-33
sp|Q9NIF3|UBQL_DICDI Ubiquilin OS=Dictyostelium discoideum GN=ubqln PE=1 SV=1 323 521 1.0E-20
sp|Q9SII9|DSK2A_ARATH Ubiquitin domain-containing protein DSK2a OS=Arabidopsis thaliana GN=DSK2A PE=1 SV=2 323 519 1.0E-19
sp|Q9SII8|DSK2B_ARATH Ubiquitin domain-containing protein DSK2b OS=Arabidopsis thaliana GN=DSK2B PE=1 SV=1 323 519 8.0E-16
sp|Q9JJP9|UBQL1_RAT Ubiquilin-1 OS=Rattus norvegicus GN=Ubqln1 PE=1 SV=1 451 689 1.0E-10
sp|Q9QZM0|UBQL2_MOUSE Ubiquilin-2 OS=Mus musculus GN=Ubqln2 PE=1 SV=2 453 689 5.0E-10
sp|Q9SII9|DSK2A_ARATH Ubiquitin domain-containing protein DSK2a OS=Arabidopsis thaliana GN=DSK2A PE=1 SV=2 647 693 2.0E-09
sp|Q9UMX0|UBQL1_HUMAN Ubiquilin-1 OS=Homo sapiens GN=UBQLN1 PE=1 SV=2 451 689 3.0E-09
sp|Q9SII8|DSK2B_ARATH Ubiquitin domain-containing protein DSK2b OS=Arabidopsis thaliana GN=DSK2B PE=1 SV=1 647 689 6.0E-09
sp|Q8R317|UBQL1_MOUSE Ubiquilin-1 OS=Mus musculus GN=Ubqln1 PE=1 SV=1 451 689 1.0E-08
sp|Q9H347|UBQL3_HUMAN Ubiquilin-3 OS=Homo sapiens GN=UBQLN3 PE=1 SV=2 308 527 2.0E-08
sp|Q99NB8|UBQL4_MOUSE Ubiquilin-4 OS=Mus musculus GN=Ubqln4 PE=1 SV=1 322 527 2.0E-08
sp|Q8R317|UBQL1_MOUSE Ubiquilin-1 OS=Mus musculus GN=Ubqln1 PE=1 SV=1 323 527 4.0E-08
sp|Q5R684|UBQL1_PONAB Ubiquilin-1 OS=Pongo abelii GN=UBQLN1 PE=2 SV=1 451 689 4.0E-08
sp|A7X5R6|BAG6_ORNAN Large proline-rich protein BAG6 OS=Ornithorhynchus anatinus GN=BAG6 PE=3 SV=1 321 408 4.0E-08
sp|Q9UHD9|UBQL2_HUMAN Ubiquilin-2 OS=Homo sapiens GN=UBQLN2 PE=1 SV=2 323 527 8.0E-08
sp|Q8C5U9|UBQL3_MOUSE Ubiquilin-3 OS=Mus musculus GN=Ubqln3 PE=1 SV=1 306 527 1.0E-07
sp|Q9NRR5|UBQL4_HUMAN Ubiquilin-4 OS=Homo sapiens GN=UBQLN4 PE=1 SV=2 451 689 2.0E-07
sp|Q9UMX0|UBQL1_HUMAN Ubiquilin-1 OS=Homo sapiens GN=UBQLN1 PE=1 SV=2 323 527 3.0E-07
sp|Q5R684|UBQL1_PONAB Ubiquilin-1 OS=Pongo abelii GN=UBQLN1 PE=2 SV=1 323 527 3.0E-07
sp|Q9NIF3|UBQL_DICDI Ubiquilin OS=Dictyostelium discoideum GN=ubqln PE=1 SV=1 641 689 5.0E-07
sp|Q9JJP9|UBQL1_RAT Ubiquilin-1 OS=Rattus norvegicus GN=Ubqln1 PE=1 SV=1 323 527 6.0E-07
sp|Q9QZM0|UBQL2_MOUSE Ubiquilin-2 OS=Mus musculus GN=Ubqln2 PE=1 SV=2 323 402 7.0E-07
sp|Q99NB8|UBQL4_MOUSE Ubiquilin-4 OS=Mus musculus GN=Ubqln4 PE=1 SV=1 451 689 1.0E-06
sp|Q05120|UBIL_NPVOP Ubiquitin-like protein OS=Orgyia pseudotsugata multicapsid polyhedrosis virus GN=V-UBI PE=3 SV=1 323 392 2.0E-06
sp|Q9UHD9|UBQL2_HUMAN Ubiquilin-2 OS=Homo sapiens GN=UBQLN2 PE=1 SV=2 632 689 4.0E-06
sp|P16709|UBIL_NPVAC Ubiquitin-like protein OS=Autographa californica nuclear polyhedrosis virus GN=V-UBI PE=3 SV=2 323 392 4.0E-06
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GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0003674 molecular_function No
GO:0005488 binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|553550
MPELDLILTHSLKIMDSYTRHPKFYFNDGSIILDVERTHFRVHQSLLNRQSELFESMFSLKQPENATRVDGCLLV
ELAGDSVSDMEEFLCTVYDPFYFDRLECTSDVDTLIKFISGILRISAKYDMTMIKRKCVSVLLEKFPITLAGCDR
IMKSEYRYKTNAIVDAINLAHTANVPEILPWAYYISTHVSVKDLLHDPNLSWKDKALCLAGKERLWHAQKTRTHA
FLFDELQSEECSVGCDGRPSVMAWSDKGFSEKTQRGEGVVMGNITRVVRAWDMERFEERLVLPGSDTVPLRFFKP
STRGSSYHALPSPAIIQMPESEIQINIKGPNELKLQISIATDKTVSELKQAVAAQSDVEADRQRLIYSGRVLKDD
DQLSVYKIQSGHTVHMVKGQARQQASAPSSSAAPQIPTMQTGQNIHDPLTQLNSHLGFGAMAGINPFADLGVNPN
DPNMMTSLFNDPRVLEQMASAMSNPAVVDQVIAMNPQLAGMAPQMRQVFQSEEFRRMMSNPEQLQGFMRMASVMR
QMQGGSGNSPFGDALAPPTPGFPAPGVPGQNPANPSSTMPSFNNPNPSTTTAPLPGAANPTSPGSGAAGATPNPM
NPFGLDPALMQQMLFGGGFGAGAGGAGSGGAGLGGFGAPPPPADARPPEERFQVQLQQLQDMGFTNASQNVRALM
ATGGNVHSAIEYILSGGGL*
Coding >Agabi119p4|553550
ATGCCGGAGCTTGACCTCATCCTTACGCATTCTTTGAAGATAATGGACTCTTATACTCGACATCCAAAGTTCTAT
TTCAACGATGGCTCGATCATCCTAGATGTAGAGCGAACACATTTTCGGGTCCATCAATCTCTTTTGAATAGACAG
TCGGAGTTGTTCGAATCCATGTTTTCACTCAAGCAACCTGAGAATGCTACCCGAGTAGATGGATGTTTGCTCGTA
GAACTAGCCGGAGACTCAGTTTCTGATATGGAAGAATTTCTTTGTACTGTATATGATCCATTCTACTTCGACCGA
CTAGAATGTACCAGCGATGTTGATACCCTTATCAAATTTATCTCTGGCATCCTTCGCATCAGCGCAAAGTATGAC
ATGACGATGATCAAACGAAAATGCGTTAGCGTTCTCCTCGAGAAATTTCCAATCACCCTCGCTGGTTGTGATAGG
ATCATGAAGTCCGAGTATCGATATAAAACGAACGCTATCGTTGACGCAATCAATTTGGCTCATACAGCCAATGTA
CCAGAAATCTTACCATGGGCGTATTATATTTCAACACACGTCTCGGTGAAAGACTTACTGCACGACCCGAATTTG
TCTTGGAAAGACAAAGCATTATGTCTGGCAGGAAAGGAGCGTCTATGGCACGCCCAAAAAACTCGAACTCATGCA
TTTCTTTTCGATGAATTACAATCGGAGGAGTGTAGTGTGGGATGTGATGGAAGGCCTTCGGTGATGGCATGGAGT
GATAAGGGATTTTCAGAGAAGACACAAAGAGGCGAGGGTGTGGTTATGGGAAACATTACCAGAGTTGTTCGAGCT
TGGGACATGGAACGGTTTGAGGAGCGACTTGTTCTGCCTGGTTCTGATACTGTACCTCTTAGATTCTTCAAGCCA
AGCACCCGCGGCAGTTCGTACCACGCACTTCCTTCTCCCGCCATAATCCAGATGCCCGAATCAGAAATTCAAATC
AACATAAAGGGCCCGAATGAGCTCAAGCTCCAGATTTCTATCGCGACAGACAAAACTGTCAGTGAATTGAAGCAG
GCCGTCGCTGCGCAGTCTGACGTAGAGGCTGACCGTCAGCGCTTGATTTACTCTGGTCGTGTGCTCAAGGACGAT
GATCAATTGTCGGTGTACAAGATTCAATCCGGGCACACCGTTCATATGGTCAAAGGCCAGGCTAGACAGCAAGCT
TCCGCGCCCTCTTCATCCGCCGCTCCTCAGATACCTACTATGCAGACGGGACAGAATATTCACGATCCTCTCACC
CAACTAAATAGCCATCTCGGTTTCGGAGCGATGGCTGGTATCAACCCTTTTGCCGATCTCGGTGTCAATCCTAAT
GATCCCAATATGATGACTTCTTTGTTCAACGATCCACGAGTACTTGAACAAATGGCCTCTGCGATGTCCAATCCA
GCAGTAGTTGATCAAGTTATCGCCATGAATCCTCAGCTCGCCGGGATGGCGCCTCAAATGCGACAAGTATTTCAA
AGTGAAGAATTTCGACGAATGATGTCCAACCCAGAACAGTTACAGGGTTTCATGCGGATGGCGTCAGTGATGCGT
CAGATGCAGGGTGGTTCCGGTAACAGTCCGTTTGGGGACGCGCTTGCTCCTCCTACACCTGGTTTTCCCGCTCCT
GGCGTTCCAGGTCAAAATCCTGCCAACCCATCGTCGACAATGCCCTCATTCAATAATCCCAACCCTTCAACAACA
ACAGCTCCATTACCCGGTGCAGCGAATCCTACTTCACCTGGCTCAGGCGCTGCGGGTGCAACGCCTAACCCTATG
AATCCTTTTGGCTTAGATCCTGCATTGATGCAGCAAATGCTTTTCGGTGGGGGCTTCGGTGCAGGTGCGGGAGGT
GCAGGATCAGGTGGTGCCGGGCTGGGTGGTTTCGGTGCCCCGCCTCCCCCTGCGGATGCACGGCCACCTGAAGAA
CGATTTCAAGTTCAACTCCAGCAATTGCAGGATATGGGTTTCACTAATGCTTCACAAAATGTTCGAGCTTTAATG
GCGACGGGAGGAAATGTACATTCCGCTATTGAGTATATTTTAAGTGGTGGCGGTCTGTAA
Transcript >Agabi119p4|553550
ATGCCGGAGCTTGACCTCATCCTTACGCATTCTTTGAAGATAATGGACTCTTATACTCGACATCCAAAGTTCTAT
TTCAACGATGGCTCGATCATCCTAGATGTAGAGCGAACACATTTTCGGGTCCATCAATCTCTTTTGAATAGACAG
TCGGAGTTGTTCGAATCCATGTTTTCACTCAAGCAACCTGAGAATGCTACCCGAGTAGATGGATGTTTGCTCGTA
GAACTAGCCGGAGACTCAGTTTCTGATATGGAAGAATTTCTTTGTACTGTATATGATCCATTCTACTTCGACCGA
CTAGAATGTACCAGCGATGTTGATACCCTTATCAAATTTATCTCTGGCATCCTTCGCATCAGCGCAAAGTATGAC
ATGACGATGATCAAACGAAAATGCGTTAGCGTTCTCCTCGAGAAATTTCCAATCACCCTCGCTGGTTGTGATAGG
ATCATGAAGTCCGAGTATCGATATAAAACGAACGCTATCGTTGACGCAATCAATTTGGCTCATACAGCCAATGTA
CCAGAAATCTTACCATGGGCGTATTATATTTCAACACACGTCTCGGTGAAAGACTTACTGCACGACCCGAATTTG
TCTTGGAAAGACAAAGCATTATGTCTGGCAGGAAAGGAGCGTCTATGGCACGCCCAAAAAACTCGAACTCATGCA
TTTCTTTTCGATGAATTACAATCGGAGGAGTGTAGTGTGGGATGTGATGGAAGGCCTTCGGTGATGGCATGGAGT
GATAAGGGATTTTCAGAGAAGACACAAAGAGGCGAGGGTGTGGTTATGGGAAACATTACCAGAGTTGTTCGAGCT
TGGGACATGGAACGGTTTGAGGAGCGACTTGTTCTGCCTGGTTCTGATACTGTACCTCTTAGATTCTTCAAGCCA
AGCACCCGCGGCAGTTCGTACCACGCACTTCCTTCTCCCGCCATAATCCAGATGCCCGAATCAGAAATTCAAATC
AACATAAAGGGCCCGAATGAGCTCAAGCTCCAGATTTCTATCGCGACAGACAAAACTGTCAGTGAATTGAAGCAG
GCCGTCGCTGCGCAGTCTGACGTAGAGGCTGACCGTCAGCGCTTGATTTACTCTGGTCGTGTGCTCAAGGACGAT
GATCAATTGTCGGTGTACAAGATTCAATCCGGGCACACCGTTCATATGGTCAAAGGCCAGGCTAGACAGCAAGCT
TCCGCGCCCTCTTCATCCGCCGCTCCTCAGATACCTACTATGCAGACGGGACAGAATATTCACGATCCTCTCACC
CAACTAAATAGCCATCTCGGTTTCGGAGCGATGGCTGGTATCAACCCTTTTGCCGATCTCGGTGTCAATCCTAAT
GATCCCAATATGATGACTTCTTTGTTCAACGATCCACGAGTACTTGAACAAATGGCCTCTGCGATGTCCAATCCA
GCAGTAGTTGATCAAGTTATCGCCATGAATCCTCAGCTCGCCGGGATGGCGCCTCAAATGCGACAAGTATTTCAA
AGTGAAGAATTTCGACGAATGATGTCCAACCCAGAACAGTTACAGGGTTTCATGCGGATGGCGTCAGTGATGCGT
CAGATGCAGGGTGGTTCCGGTAACAGTCCGTTTGGGGACGCGCTTGCTCCTCCTACACCTGGTTTTCCCGCTCCT
GGCGTTCCAGGTCAAAATCCTGCCAACCCATCGTCGACAATGCCCTCATTCAATAATCCCAACCCTTCAACAACA
ACAGCTCCATTACCCGGTGCAGCGAATCCTACTTCACCTGGCTCAGGCGCTGCGGGTGCAACGCCTAACCCTATG
AATCCTTTTGGCTTAGATCCTGCATTGATGCAGCAAATGCTTTTCGGTGGGGGCTTCGGTGCAGGTGCGGGAGGT
GCAGGATCAGGTGGTGCCGGGCTGGGTGGTTTCGGTGCCCCGCCTCCCCCTGCGGATGCACGGCCACCTGAAGAA
CGATTTCAAGTTCAACTCCAGCAATTGCAGGATATGGGTTTCACTAATGCTTCACAAAATGTTCGAGCTTTAATG
GCGACGGGAGGAAATGTACATTCCGCTATTGAGTATATTTTAAGTGGTGGCGGTCTGTAA
Gene >Agabi119p4|553550
ATGCCGGAGCTTGACCTCATCCTTACGCATTCTTTGAAGATAATGGACTCTTATACTCGACATCCAAAGTTCTAT
TTCAACGATGGCTCGATCATCCTAGATGTAGAGCGAACACATTTTCGGGTCCATCAATCTCTTTTGAATAGACAG
TCGGAGTTGTTCGAATCCATGTTTTCACTCAAGCAACCTGAGAATGCTACCCGAGTAGATGGATGTTTGCTCGTA
GAACTAGCCGGAGACTCAGTTTCTGATATGGAAGAATTTCTTTGTACTGTATATGATCCATTGTGCGCTATACGT
CATCTCTTCCTATTTCTTCTAATCAAACAATCGCATAGCTACTTCGACCGACTAGAATGTACCAGCGATGTTGAT
ACCCTTATCAAATTTATCTCTGGCATCCTTCGCATCAGCGCAAAGTATGACATGACGATGATCAAACGAAAATGC
GTTAGCGTTCTCCTCGAGAAATTTCCAATCACCCTCGCTGGTTGTGATAGGATCATGAAGTCCGAGTATCGATAT
AAAACGAACGCTATCGTTGACGCAATCAATTTGGCTCATACAGCCAATGTACCAGAAATCTTACCATGGGCGTAT
TATATTTCAACACACGTCTCGGTGAAAGACTTACTGCACGACCCGAATTTGTCTTGGAAAGACAAAGCATTATGT
CTGGCAGGAAAGGAGCGTCTATGGCACGCCCAAAAAACTCGAACTCATGCATTTCTTTTCGATGAATTACAATCG
GAGGAGTGTAGTGTGGGATGTGATGGAAGGCCTTCGGTGATGGCATGGAGTGATAGTGAGCGATTAAGGATGAAT
CCACATCCGTTGGAGGAGTATAAGAAGTGGTCAGACCTTAATATTTGTATGAACTGTCAGAGGGATTTTCAGAGA
AGACACAAAGAGGCGAGGGTGTGGTTATGGGAAACATTACCAGAGTTGTTCGAGCTTGGGACATGGAACGGTTTG
AGGAGCGACTTGTAGGATCATGTTCTGAGATTAATTTTTCATATTTATCAGTACATGCAGGTTCTGCCTGGTTCT
GATACTGTACCTCTTAGATTCTTCAAGCCAAGGTAATCTGATCCATGGGAAGATGTGATAAGATCACGTGTGATA
TGACATAGCACCCGCGGCAGTTCGTACCACGCACTTCCTTCTCCCGCCATAATCCAGATGCCCGAATCAGAAATT
CAAATCAACATAAAGGGTACATTTCAACTATATATCCTGCTCTAAATTGACCGAAATCATAGGCCCGAATGAGCT
CAAGCTCCAGATTTCTATCGCGACAGACAAAACTGTCAGTGAATTGAAGCAGGCCGTCGCTGCGCAGTCTGACGT
AGAGGCTGACCGTCAGCGCTTGATTTACTCTGGTGCGTTAATGAGAGCTCATAAGTTCCTATACATTTAATCAAT
CTTAACAGGTCGTGTGCTCAAGGTGAGCTCCTTTTTTGATCTTGAAGTCAAACCTCTCCCAACACTCGACTCAGG
ACGATGATCAATTGTCGGTGTACAAGATTCAATCCGGGCACACCGTTCATATGGTCAAAGGCCAGGCTAGACAGC
AAGCTTCCGCGCCCTCTTCATCCGCCGCTCCTCAGATACCTACTATGCAGACGGGACAGAATATTCACGATCCTC
TCACCCAACTAAATAGCCATCTCGGTTTCGGAGCGATGGCTGGTATCAACCCTTTTGCCGATCTCGGTGTCAATC
CTAATGATCCCAATATGGTGAGTGGTCTGCCCCTGGTAAGCTGTATGGTTTTTTCTCAAAATCTTTTAGATGACT
TCTTTGTTCAACGATCCACGAGTACTTGAACAAATGGCCTCTGCGATGTCCAATCCAGCAGTAGTTGATCAAGTT
ATCGCCATGAATCCTCAGCTCGCCGGGATGGCGCCTCAAATGCGACAAGTATTTCAAAGTGAAGAATTTCGACGA
ATGATGTACGTCTACCTCGCCAGATGCTTCGATAGCACTAAATCCGCTAAAATTGTATTGATCGCCAGGTCCAAC
CCAGAACAGTTACAGGGTTTCATGCGGATGGCGTCAGTGATGCGTCAGATGCAGGGTGGTTCCGGTAACAGTCCG
TTTGGGGACGCGCTTGCTCCTCCTACACCTGGTTTTCCCGCTCCTGGCGTTCCAGGTCAAAATCCTGCCAACCCA
TCGTCGACAATGCCCTCATTCAATAATCCCAACCCTTCAACAACAACAGCTCCATTACCCGGTGCAGCGAATCCT
ACTTCACCTGGCTCAGGCGCTGCGGGTGCAACGCCTAACCCTATGAATCCTTTTGGCTTAGATCCTGCATTGATG
CAGCAAATGCTTTTCGGTGGGGGCTTCGGTGCAGGTGCGGGAGGTGCAGGATCAGGTGGTGCCGGGCTGGGTGGT
TTCGGTGCCCCGCCTCCCCCTGCGGATGCACGGCCACCTGAAGAACGATTTCAAGTTCAACTCCAGGTCCGTCAT
CTTCATACATTGACCTAAGGAGAATCTTACGAGCATGGTTCTTTTTCCTAGCAATTGCAGGATATGGGTTTCACT
AATGCTTCACAAAATGTTCGAGCTTTAATGGCGACGGGAGGAAATGTACATTCCGCTATTGAGTATATTTTAAGT
GGTGGCGGTCTGTAA

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