Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|553350
Gene name
Locationscaffold_01a:24937..26781
Strand-
Gene length (bp)1844
Transcript length (bp)1473
Coding sequence length (bp)1473
Protein length (aa) 491

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01565 FAD_binding_4 FAD binding domain 2.6E-17 73 204

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|D7UQ40|SOL5_ALTSO Bifunctional solanapyrone synthase OS=Alternaria solani GN=sol5 PE=1 SV=1 24 329 2.0E-36
sp|D4B1P2|A2372_ARTBC Uncharacterized FAD-linked oxidoreductase ARB_02372 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02372 PE=1 SV=1 9 328 2.0E-34
sp|P43485|MCRA_STRLA Mitomycin radical oxidase OS=Streptomyces lavendulae GN=mcrA PE=1 SV=2 79 261 2.0E-13
sp|Q54H55|Y8969_DICDI FAD-linked oxidoreductase DDB_G0289697 OS=Dictyostelium discoideum GN=DDB_G0289697 PE=2 SV=1 40 301 6.0E-12
sp|P08159|HDNO_ARTOX 6-hydroxy-D-nicotine oxidase OS=Arthrobacter oxydans PE=1 SV=2 97 234 1.0E-10
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|D7UQ40|SOL5_ALTSO Bifunctional solanapyrone synthase OS=Alternaria solani GN=sol5 PE=1 SV=1 24 329 2.0E-36
sp|D4B1P2|A2372_ARTBC Uncharacterized FAD-linked oxidoreductase ARB_02372 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02372 PE=1 SV=1 9 328 2.0E-34
sp|P43485|MCRA_STRLA Mitomycin radical oxidase OS=Streptomyces lavendulae GN=mcrA PE=1 SV=2 79 261 2.0E-13
sp|Q54H55|Y8969_DICDI FAD-linked oxidoreductase DDB_G0289697 OS=Dictyostelium discoideum GN=DDB_G0289697 PE=2 SV=1 40 301 6.0E-12
sp|P08159|HDNO_ARTOX 6-hydroxy-D-nicotine oxidase OS=Arthrobacter oxydans PE=1 SV=2 97 234 1.0E-10
sp|D4B1Z7|A2478_ARTBC Uncharacterized FAD-linked oxidoreductase ARB_02478 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02478 PE=1 SV=1 135 311 2.0E-10
sp|Q9LTS3|CKX3_ARATH Cytokinin dehydrogenase 3 OS=Arabidopsis thaliana GN=CKX3 PE=1 SV=1 57 232 7.0E-08
sp|Q9FUJ1|CKX7_ARATH Cytokinin dehydrogenase 7 OS=Arabidopsis thaliana GN=CKX7 PE=1 SV=1 73 239 2.0E-07
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GO

GO Term Description Terminal node
GO:0016491 oxidoreductase activity Yes
GO:0050660 flavin adenine dinucleotide binding Yes
GO:0097159 organic cyclic compound binding No
GO:1901363 heterocyclic compound binding No
GO:0043167 ion binding No
GO:0003824 catalytic activity No
GO:0000166 nucleotide binding No
GO:0043168 anion binding No
GO:1901265 nucleoside phosphate binding No
GO:0005488 binding No
GO:0003674 molecular_function No
GO:0036094 small molecule binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 25 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|553350
MMLLTRFPVFTLAVLSLFPYTSWGNSDHEKAVAACAILKQQIPHAVHFPGTSEYLQDIGHYVQVAGQNSTCGVAP
MTPEEVQMIVKVLGRDDIRAPFAVKSGGHVFNPGFSSTFGVQVSLQNLLDFDYDEEAQTVKLGSGWTWDAIYEML
QPKNVTVVGGRIPGVGLGLLYGGGLSWYTNQHGLASDNVVEFNLVLPNGTFVNVTETSQPDLYFGLRGGLNNFGI
ITGVTVKTWPTGDIWGGTIAYSIEHNDEIMKAVEEFSVENTDVKAQLQAVYTLTREKAFWQIIFFYDAPDSSPAP
FKAFLSIPSTSDTTEVTTHSQFVKNTPFPPVVGSYLHTVPVLQYTVPVLQAVETSVNASFAKALEDERSAATFYW
FAEPFYNQNSHSTFPSAFPHSPSNPITPSCFWYNYTSPDDVEYFRALIKDVGTELQTVVVEEGQGRWDDVKYSNY
AVKGTTVEEVFGESLEKMRDLKKRIDPKNVMGLQKEGFLI*
Coding >Agabi119p4|553350
ATGATGCTTCTCACTCGATTCCCCGTTTTCACGCTAGCAGTTCTTTCGCTCTTCCCTTACACATCATGGGGAAAT
AGCGATCACGAGAAGGCTGTGGCAGCGTGTGCCATATTGAAGCAACAGATTCCTCATGCAGTACATTTCCCAGGA
ACTTCGGAATATTTGCAAGATATAGGGCACTATGTGCAAGTGGCAGGACAGAACTCAACATGCGGAGTCGCACCA
ATGACTCCCGAGGAAGTTCAGATGATTGTAAAAGTACTCGGCAGAGATGACATTCGTGCTCCATTTGCTGTCAAA
TCTGGTGGACATGTATTTAACCCTGGATTTTCATCTACGTTTGGGGTTCAGGTCTCGCTGCAGAATCTTCTCGAT
TTTGATTATGATGAAGAGGCCCAAACAGTGAAACTAGGGTCTGGGTGGACGTGGGATGCGATTTATGAAATGCTT
CAACCAAAGAATGTCACAGTAGTTGGAGGAAGAATTCCCGGTGTCGGACTCGGTCTTCTTTATGGCGGCGGGCTT
TCATGGTATACCAATCAGCATGGTTTAGCCTCTGACAACGTGGTCGAATTTAACTTAGTGTTGCCAAACGGGACT
TTTGTCAACGTCACAGAAACATCTCAGCCTGATTTATATTTTGGGCTCCGAGGTGGTTTAAATAACTTTGGGATT
ATCACAGGTGTTACAGTAAAGACGTGGCCTACAGGCGATATTTGGGGGGGAACGATTGCTTACTCGATCGAGCAT
AATGATGAAATCATGAAAGCCGTCGAGGAATTCAGCGTAGAAAATACGGATGTGAAAGCTCAATTGCAAGCTGTG
TATACGCTAACCAGAGAGAAGGCGTTTTGGCAAATCATATTTTTCTACGATGCGCCTGATTCGTCACCGGCTCCA
TTCAAAGCATTCCTTTCTATCCCATCGACTAGTGATACCACTGAAGTCACTACTCACAGTCAATTCGTGAAGAAC
ACTCCTTTCCCTCCTGTAGTCGGATCATATCTTCACACGGTACCCGTCCTCCAATATACCGTTCCGGTCCTTCAA
GCTGTCGAAACATCAGTAAACGCCTCCTTCGCTAAAGCCCTCGAAGATGAACGATCAGCAGCAACTTTTTATTGG
TTCGCTGAACCGTTCTACAATCAAAATTCACATTCTACTTTCCCATCCGCGTTCCCTCATTCCCCATCCAACCCA
ATAACACCGTCATGCTTCTGGTACAACTACACTTCTCCTGACGATGTCGAATATTTCAGGGCATTGATCAAGGAT
GTTGGAACGGAGTTACAGACGGTTGTTGTAGAGGAAGGGCAAGGTCGTTGGGATGATGTCAAATATTCGAATTAT
GCAGTAAAGGGAACAACAGTGGAAGAGGTGTTCGGAGAGAGCCTAGAAAAAATGAGGGATTTGAAGAAGAGGATT
GATCCGAAGAATGTCATGGGTTTGCAAAAGGAAGGATTCTTGATTTGA
Transcript >Agabi119p4|553350
ATGATGCTTCTCACTCGATTCCCCGTTTTCACGCTAGCAGTTCTTTCGCTCTTCCCTTACACATCATGGGGAAAT
AGCGATCACGAGAAGGCTGTGGCAGCGTGTGCCATATTGAAGCAACAGATTCCTCATGCAGTACATTTCCCAGGA
ACTTCGGAATATTTGCAAGATATAGGGCACTATGTGCAAGTGGCAGGACAGAACTCAACATGCGGAGTCGCACCA
ATGACTCCCGAGGAAGTTCAGATGATTGTAAAAGTACTCGGCAGAGATGACATTCGTGCTCCATTTGCTGTCAAA
TCTGGTGGACATGTATTTAACCCTGGATTTTCATCTACGTTTGGGGTTCAGGTCTCGCTGCAGAATCTTCTCGAT
TTTGATTATGATGAAGAGGCCCAAACAGTGAAACTAGGGTCTGGGTGGACGTGGGATGCGATTTATGAAATGCTT
CAACCAAAGAATGTCACAGTAGTTGGAGGAAGAATTCCCGGTGTCGGACTCGGTCTTCTTTATGGCGGCGGGCTT
TCATGGTATACCAATCAGCATGGTTTAGCCTCTGACAACGTGGTCGAATTTAACTTAGTGTTGCCAAACGGGACT
TTTGTCAACGTCACAGAAACATCTCAGCCTGATTTATATTTTGGGCTCCGAGGTGGTTTAAATAACTTTGGGATT
ATCACAGGTGTTACAGTAAAGACGTGGCCTACAGGCGATATTTGGGGGGGAACGATTGCTTACTCGATCGAGCAT
AATGATGAAATCATGAAAGCCGTCGAGGAATTCAGCGTAGAAAATACGGATGTGAAAGCTCAATTGCAAGCTGTG
TATACGCTAACCAGAGAGAAGGCGTTTTGGCAAATCATATTTTTCTACGATGCGCCTGATTCGTCACCGGCTCCA
TTCAAAGCATTCCTTTCTATCCCATCGACTAGTGATACCACTGAAGTCACTACTCACAGTCAATTCGTGAAGAAC
ACTCCTTTCCCTCCTGTAGTCGGATCATATCTTCACACGGTACCCGTCCTCCAATATACCGTTCCGGTCCTTCAA
GCTGTCGAAACATCAGTAAACGCCTCCTTCGCTAAAGCCCTCGAAGATGAACGATCAGCAGCAACTTTTTATTGG
TTCGCTGAACCGTTCTACAATCAAAATTCACATTCTACTTTCCCATCCGCGTTCCCTCATTCCCCATCCAACCCA
ATAACACCGTCATGCTTCTGGTACAACTACACTTCTCCTGACGATGTCGAATATTTCAGGGCATTGATCAAGGAT
GTTGGAACGGAGTTACAGACGGTTGTTGTAGAGGAAGGGCAAGGTCGTTGGGATGATGTCAAATATTCGAATTAT
GCAGTAAAGGGAACAACAGTGGAAGAGGTGTTCGGAGAGAGCCTAGAAAAAATGAGGGATTTGAAGAAGAGGATT
GATCCGAAGAATGTCATGGGTTTGCAAAAGGAAGGATTCTTGATTTGA
Gene >Agabi119p4|553350
ATGATGCTTCTCACTCGATTCCCCGTTTTCACGCTAGCAGTTCTTTCGCTCTTCCCTTACACATCATGGGGAAAT
AGCGATCACGAGAAGGCTGTGGCAGCGTGTGCCATATTGAAGCAACAGATTCCTCATGCAGTACATTTCCCAGGT
ATGTGCCCTGCCTACTTCCTCGAAACGTTTCTAAAAAATTACCGTTGATTAGGAACTTCGGAATATTTGCAAGAT
ATAGGGCACTATGTGCAAGTGGCAGGACAGAACTCAACATGCGGAGTCGCACCAATGACTCCCGAGGAAGTTCAG
ATGATTGTATGTTTTCGTTGAATTCTCGACGATTCACTACAACTTTGGCATTACTTTCAGGTAAAAGTACTCGGC
AGAGATGACATTCGTGCTCCATTTGCTGTACGTCTCCTGATTTATCTTTGTTGTCGTCCTACTCACTCGGGATAA
CAACCTAGGTCAAATCTGGTGGACATGTATTTAACCCTGGATTTTCATCTACGTTTGGGGTTCAGGTCTCGCTGC
AGAATCTTCTCGATTTTGATTATGATGAAGAGGCCCAAACAGTGAAACTAGGGTCTGGGTGGACGTGGGATGCGA
TTTATGAAATGCTTCAACCAAAGAATGTCACAGTAGTTGGAGGAAGAATTCCCGGTGTCGGTATGTCTGCCTTCG
GTTGAGTAACCCCCGGGATGCTTAGAGTATGCTTAGGACTCGGTCTTCTTTATGGCGGCGGGCTTTCATGGTATA
CCAATCAGCATGGTTTAGCCTCTGACAACGTGGTCGAATTTAACTTAGTGTTGCCAAACGGGACTTTTGTCAACG
TCACAGAAACATCTCAGCCTGATTTATATTTTGGGCTCCGAGGTGGTTTAAATAACTTTGGGATTATCACAGGTG
TTACAGTAAAGACGTGGCCTACAGGCGATATTTGGGTGAGCTTCTATCTTTCATTGGGAAGCAATCCAAGGTAAC
AATTCTTTGCAGGGGGGAACGATTGCTTACTCGATCGAGCATAATGATGAAATCATGAAAGCCGTCGAGGAATTC
AGCGTAGAAAATACGGATGTGAAAGCTCAATTGCAAGCTGTGTATACGCTAACCAGAGAGAAGGTTTGCTATTTT
TAAGTATCATAGTGGTTATTTTTGATACCGTGCACAGGCGTTTTGGCAAATCATATTTTTCTACGATGCGCCTGA
TTCGTCACCGGCTCCATTCAAAGCATTCCTTTCTATCCCATCGACTAGTGATACCACTGAAGTCACTACTCACAG
TCAATTCGTGAAGAACACTCCTTTCCCTCCGTGAGCAAAGCCTCCAACCCCCGGTGTATTCTATTTTCACATTTA
CTCTCTTTAGTGTAGTCGGATCATATCTTCACACGGTACCCGTCCTCCAATATACCGTTCCGGTCCTTCAAGCTG
TCGAAACATCAGTAAACGCCTCCTTCGCTAAAGCCCTCGAAGATGAACGATCAGCAGCAACTTTTTATTGGTTCG
CTGAACCGTTCTACAATCAAAATTCACATTCTACTTTCCCATCCGCGTTCCCTCATTCCCCATCCAACCCAATAA
CACCGTCATGCTTCTGGTACAACTACACTTCTCCTGACGATGTCGAATATTTCAGGGCATTGATCAAGGATGTTG
GAACGGAGTTACAGACGGTTGTTGTAGAGGAAGGGCAAGGTCGTTGGGATGATGTCAAATATTCGAATTATGCAG
TAAAGGGAACAACAGTGGAAGAGGTGTTCGGAGAGAGCCTAGAAAAAATGAGGGATTTGAAGAAGAGGATTGATC
CGAAGAATGTCATGGGTTTGCAAAAGGAAGGATTCTTGATTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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