© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Agabi119p4|117480 |
| Gene name | |
| Location | scaffold_09:1214779..1216845 |
| Strand | + |
| Gene length (bp) | 2066 |
| Transcript length (bp) | 1827 |
| Coding sequence length (bp) | 1827 |
| Protein length (aa) | 609 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00649 | Copper-fist | Copper fist DNA binding domain | 3.2E-21 | 2 | 40 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P45815|CRF1_YARLI | Copper resistance protein CRF1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=CRF1 PE=3 SV=1 | 1 | 61 | 5.0E-20 |
| sp|Q09728|CUF1_SCHPO | Metal-binding regulatory protein cuf1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cuf1 PE=1 SV=1 | 1 | 61 | 4.0E-17 |
| sp|P15315|CUP2_YEAST | Transcriptional activator protein CUP2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CUP2 PE=1 SV=1 | 1 | 61 | 7.0E-16 |
| sp|Q12753|HAA1_YEAST | Transcriptional activator HAA1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HAA1 PE=1 SV=1 | 1 | 80 | 1.0E-15 |
| sp|P41772|AMT1_CANGA | Metal-activated transcriptional activator protein AMT1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=AMT1 PE=1 SV=1 | 1 | 149 | 6.0E-14 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P45815|CRF1_YARLI | Copper resistance protein CRF1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=CRF1 PE=3 SV=1 | 1 | 61 | 5.0E-20 |
| sp|Q09728|CUF1_SCHPO | Metal-binding regulatory protein cuf1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cuf1 PE=1 SV=1 | 1 | 61 | 4.0E-17 |
| sp|P15315|CUP2_YEAST | Transcriptional activator protein CUP2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CUP2 PE=1 SV=1 | 1 | 61 | 7.0E-16 |
| sp|Q12753|HAA1_YEAST | Transcriptional activator HAA1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HAA1 PE=1 SV=1 | 1 | 80 | 1.0E-15 |
| sp|P41772|AMT1_CANGA | Metal-activated transcriptional activator protein AMT1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=AMT1 PE=1 SV=1 | 1 | 149 | 6.0E-14 |
| sp|O94588|CUF2_SCHPO | Copper-binding regulatory protein cuf2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cuf2 PE=2 SV=1 | 1 | 64 | 4.0E-13 |
| sp|Q5AFK0|MAC1_CANAL | Metal-binding activator 1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=MAC1 PE=2 SV=1 | 1 | 39 | 2.0E-08 |
| sp|P35192|MAC1_YEAST | Metal-binding activator 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MAC1 PE=1 SV=2 | 1 | 39 | 2.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005507 | copper ion binding | Yes |
| GO:0003700 | DNA-binding transcription factor activity | Yes |
| GO:0003677 | DNA binding | Yes |
| GO:0006355 | regulation of transcription, DNA-templated | Yes |
| GO:0031323 | regulation of cellular metabolic process | No |
| GO:0003676 | nucleic acid binding | No |
| GO:0003674 | molecular_function | No |
| GO:0060255 | regulation of macromolecule metabolic process | No |
| GO:0031326 | regulation of cellular biosynthetic process | No |
| GO:0019219 | regulation of nucleobase-containing compound metabolic process | No |
| GO:0140110 | transcription regulator activity | No |
| GO:0019222 | regulation of metabolic process | No |
| GO:0005488 | binding | No |
| GO:0009889 | regulation of biosynthetic process | No |
| GO:0065007 | biological regulation | No |
| GO:0046872 | metal ion binding | No |
| GO:0043169 | cation binding | No |
| GO:1903506 | regulation of nucleic acid-templated transcription | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:2001141 | regulation of RNA biosynthetic process | No |
| GO:0051252 | regulation of RNA metabolic process | No |
| GO:0050794 | regulation of cellular process | No |
| GO:0043167 | ion binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0050789 | regulation of biological process | No |
| GO:0051171 | regulation of nitrogen compound metabolic process | No |
| GO:0046914 | transition metal ion binding | No |
| GO:0010556 | regulation of macromolecule biosynthetic process | No |
| GO:0008150 | biological_process | No |
| GO:0010468 | regulation of gene expression | No |
| GO:0080090 | regulation of primary metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 36 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Agabi119p4|117480 MVFIESKKYACETCIKGHRSSACKHTDRPLFEIKKKGRPVTQCEHCRELRKTKQVHVKCICEIKNDPTNVYKKAG AKAPESAAFPNGLPEALALEASVGSLDPRTTASDPSLPSGVAHPCSCMTGGCHCWTPRKSAPRPRRKTDSALAAN LKPLATAPISPTATSPGSDVHTPQIEYPPPAASHILARISELRPVLPRPSAHHEPSSGIAHGHGNRHHHESAFFS PYGRAYDINHIHVPPVADDVPSYGAPPPQKPQIYDRAIAKSIPIAQGSTPSSEHTPVTFPSSCTCGDGCRCPGCY HHNSAAPPASPSAYATCINPGSCSTCLDCTILSLPPDTALSIPEPLQAEAIDEWIRQVQVNPDSTVTASNSNDSN GNVIDDGRFAGWDSLAQLATGRTQCATCNSFFCTCEKEAADDDRQRREVTNEDSACCDKPKVPSVDMGQGNYESS DFLDYSMLGINDVYLDSAMDVFRSRSPSSSPNSNPESFSQMLSTPFAYPALVEKMSPSQQSMYINGRGFYSDPYL SMSSNERGVDNFGVLDTPTPFMPMQVSNLDYPVENYAISNPDSDSSSYDSVDDFGSLPSQQLSDKAPRMSVSPVP LEGMRTLY* |
| Coding | >Agabi119p4|117480 ATGGTTTTCATTGAAAGCAAAAAATACGCCTGCGAAACTTGCATCAAGGGACATAGATCCTCTGCCTGCAAACAC ACAGATCGCCCACTCTTTGAGATAAAAAAGAAGGGGCGCCCTGTAACCCAGTGTGAACACTGTCGAGAACTTCGG AAAACAAAACAAGTCCATGTTAAATGCATTTGCGAAATCAAGAACGATCCTACTAACGTGTACAAGAAAGCAGGT GCAAAGGCTCCAGAGAGTGCCGCGTTCCCCAACGGCCTCCCCGAAGCGCTTGCCTTGGAGGCGTCGGTTGGATCC TTAGACCCCCGCACAACGGCTTCGGACCCGTCCCTCCCGAGTGGGGTAGCTCATCCTTGCTCATGTATGACGGGC GGTTGCCACTGCTGGACTCCTCGAAAGTCGGCACCCAGACCTCGCCGCAAGACCGACTCCGCGCTTGCCGCCAAT CTGAAACCGCTGGCCACGGCTCCCATCTCTCCCACGGCCACGTCCCCAGGTTCGGATGTCCACACTCCCCAAATC GAATATCCTCCTCCCGCCGCTTCACATATCCTTGCCCGTATATCAGAGCTTCGTCCTGTTCTCCCTCGCCCCAGT GCTCACCATGAGCCTTCGTCTGGTATTGCTCACGGGCATGGTAATCGCCATCACCACGAGAGTGCTTTCTTCAGT CCTTATGGACGGGCGTACGATATCAATCATATCCATGTCCCTCCTGTTGCCGACGATGTGCCCTCCTATGGCGCT CCTCCTCCTCAGAAACCACAAATTTATGACCGCGCTATCGCCAAGTCAATACCAATCGCCCAAGGTTCCACTCCA AGTTCCGAGCATACTCCCGTCACTTTTCCTTCCTCCTGTACATGTGGTGATGGATGCAGATGTCCTGGATGCTAT CACCATAATAGTGCCGCACCTCCAGCCTCTCCTTCCGCGTATGCCACATGCATCAATCCAGGTAGCTGCAGCACT TGCCTCGATTGCACAATACTCTCGCTCCCTCCCGACACCGCCTTGTCAATACCGGAACCCTTGCAAGCAGAAGCG ATTGATGAATGGATACGCCAAGTCCAGGTTAACCCCGACTCTACGGTTACCGCATCTAATAGCAATGACAGTAAT GGAAATGTGATAGATGATGGCCGCTTTGCGGGTTGGGACAGTCTTGCGCAGCTGGCTACAGGTCGTACCCAGTGT GCAACGTGCAACTCCTTCTTCTGTACCTGTGAGAAGGAAGCCGCGGATGACGATCGTCAACGCCGTGAAGTGACC AACGAGGATTCCGCCTGTTGTGACAAGCCTAAAGTGCCTTCGGTGGATATGGGACAAGGGAATTATGAATCGTCA GATTTTTTGGATTATTCAATGCTTGGGATAAACGATGTCTATCTCGACTCGGCGATGGATGTATTCCGAAGTCGC TCTCCGTCTTCATCTCCTAACTCGAATCCCGAATCTTTCTCTCAGATGCTTTCGACGCCGTTTGCCTACCCAGCC TTGGTCGAGAAGATGTCACCATCTCAACAGAGCATGTACATCAACGGTCGTGGATTTTACTCGGATCCTTACCTG AGTATGAGCTCCAACGAGCGTGGCGTCGACAATTTTGGGGTGCTTGATACTCCCACCCCGTTCATGCCGATGCAG GTGTCGAATCTGGATTATCCAGTCGAGAACTATGCCATTAGCAATCCCGACTCGGACTCGTCCTCTTATGATTCT GTAGATGACTTTGGGTCGCTGCCGTCTCAACAGCTGTCAGACAAGGCACCGCGGATGTCCGTGTCGCCCGTTCCT TTGGAAGGAATGCGGACTTTGTACTAA |
| Transcript | >Agabi119p4|117480 ATGGTTTTCATTGAAAGCAAAAAATACGCCTGCGAAACTTGCATCAAGGGACATAGATCCTCTGCCTGCAAACAC ACAGATCGCCCACTCTTTGAGATAAAAAAGAAGGGGCGCCCTGTAACCCAGTGTGAACACTGTCGAGAACTTCGG AAAACAAAACAAGTCCATGTTAAATGCATTTGCGAAATCAAGAACGATCCTACTAACGTGTACAAGAAAGCAGGT GCAAAGGCTCCAGAGAGTGCCGCGTTCCCCAACGGCCTCCCCGAAGCGCTTGCCTTGGAGGCGTCGGTTGGATCC TTAGACCCCCGCACAACGGCTTCGGACCCGTCCCTCCCGAGTGGGGTAGCTCATCCTTGCTCATGTATGACGGGC GGTTGCCACTGCTGGACTCCTCGAAAGTCGGCACCCAGACCTCGCCGCAAGACCGACTCCGCGCTTGCCGCCAAT CTGAAACCGCTGGCCACGGCTCCCATCTCTCCCACGGCCACGTCCCCAGGTTCGGATGTCCACACTCCCCAAATC GAATATCCTCCTCCCGCCGCTTCACATATCCTTGCCCGTATATCAGAGCTTCGTCCTGTTCTCCCTCGCCCCAGT GCTCACCATGAGCCTTCGTCTGGTATTGCTCACGGGCATGGTAATCGCCATCACCACGAGAGTGCTTTCTTCAGT CCTTATGGACGGGCGTACGATATCAATCATATCCATGTCCCTCCTGTTGCCGACGATGTGCCCTCCTATGGCGCT CCTCCTCCTCAGAAACCACAAATTTATGACCGCGCTATCGCCAAGTCAATACCAATCGCCCAAGGTTCCACTCCA AGTTCCGAGCATACTCCCGTCACTTTTCCTTCCTCCTGTACATGTGGTGATGGATGCAGATGTCCTGGATGCTAT CACCATAATAGTGCCGCACCTCCAGCCTCTCCTTCCGCGTATGCCACATGCATCAATCCAGGTAGCTGCAGCACT TGCCTCGATTGCACAATACTCTCGCTCCCTCCCGACACCGCCTTGTCAATACCGGAACCCTTGCAAGCAGAAGCG ATTGATGAATGGATACGCCAAGTCCAGGTTAACCCCGACTCTACGGTTACCGCATCTAATAGCAATGACAGTAAT GGAAATGTGATAGATGATGGCCGCTTTGCGGGTTGGGACAGTCTTGCGCAGCTGGCTACAGGTCGTACCCAGTGT GCAACGTGCAACTCCTTCTTCTGTACCTGTGAGAAGGAAGCCGCGGATGACGATCGTCAACGCCGTGAAGTGACC AACGAGGATTCCGCCTGTTGTGACAAGCCTAAAGTGCCTTCGGTGGATATGGGACAAGGGAATTATGAATCGTCA GATTTTTTGGATTATTCAATGCTTGGGATAAACGATGTCTATCTCGACTCGGCGATGGATGTATTCCGAAGTCGC TCTCCGTCTTCATCTCCTAACTCGAATCCCGAATCTTTCTCTCAGATGCTTTCGACGCCGTTTGCCTACCCAGCC TTGGTCGAGAAGATGTCACCATCTCAACAGAGCATGTACATCAACGGTCGTGGATTTTACTCGGATCCTTACCTG AGTATGAGCTCCAACGAGCGTGGCGTCGACAATTTTGGGGTGCTTGATACTCCCACCCCGTTCATGCCGATGCAG GTGTCGAATCTGGATTATCCAGTCGAGAACTATGCCATTAGCAATCCCGACTCGGACTCGTCCTCTTATGATTCT GTAGATGACTTTGGGTCGCTGCCGTCTCAACAGCTGTCAGACAAGGCACCGCGGATGTCCGTGTCGCCCGTTCCT TTGGAAGGAATGCGGACTTTGTACTAA |
| Gene | >Agabi119p4|117480 ATGGTCAGTACACCTCCTATCTCGACACCCGTACACACCCGCTCACCACCGCCGACAGGTTTTCATTGAAAGCAA AAAATACGCCTGGTAGGCACCCCTCTTTTTCTGGTGCACGTCCACTGACACCCTATCAGCGAAACTTGCATCAAG GGACATAGATCCTCTGCCTGCAAACACACAGATCGCCCACTCTTTGAGATAAAAAAGAAGGGGCGCCCTGTAACC CAGTGTGAACACTGTCGAGAACTTCGGAAAACAAAACAAGTCCATGTTAAATGCATTTGCGAAATCAAGAACGAT CCTACTAACGTGTACAAGAAAGGTGTGCACTATCACTCTTTTTTGACTTGCAGCTTGCTCATTGATAAGGCTCTG TCCATCTTCATCTTTACTTGCAGCAGGTGCAAAGGCTCCAGAGAGTGCCGCGTTCCCCAACGGCCTCCCCGAAGC GCTTGCCTTGGAGGCGTCGGTTGGATCCTTAGACCCCCGCACAACGGCTTCGGACCCGTCCCTCCCGAGTGGTAT GCCGCCCTTGGATTGTGTCCTCGAGTGATGAGTCGCCGTTGCTAATGTAAACGTTAGGGGTAGCTCATCCTTGCT CATGTATGACGGGCGGTTGCCACTGCTGGACTCCTCGAAAGTCGGCACCCAGACCTCGCCGCAAGACCGACTCCG CGCTTGCCGCCAATCTGAAACCGCTGGCCACGGCTCCCATCTCTCCCACGGCCACGTCCCCAGGTTCGGATGTCC ACACTCCCCAAATCGAATATCCTCCTCCCGCCGCTTCACATATCCTTGCCCGTATATCAGAGCTTCGTCCTGTTC TCCCTCGCCCCAGTGCTCACCATGAGCCTTCGTCTGGTATTGCTCACGGGCATGGTAATCGCCATCACCACGAGA GTGCTTTCTTCAGTCCTTATGGACGGGCGTACGATATCAATCATATCCATGTCCCTCCTGTTGCCGACGATGTGC CCTCCTATGGCGCTCCTCCTCCTCAGAAACCACAAATTTATGACCGCGCTATCGCCAAGTCAATACCAATCGCCC AAGGTTCCACTCCAAGTTCCGAGCATACTCCCGTCACTTTTCCTTCCTCCTGTACATGTGGTGATGGATGCAGAT GTCCTGGATGCTATCACCATAATAGTGCCGCACCTCCAGCCTCTCCTTCCGCGTATGCCACATGCATCAATCCAG GTAGCTGCAGCACTTGCCTCGATTGCACAATACTCTCGCTCCCTCCCGACACCGCCTTGTCAATACCGGAACCCT TGCAAGCAGAAGCGATTGATGAATGGATACGCCAAGTCCAGGTTAACCCCGACTCTACGGTTACCGCATCTAATA GCAATGACAGTAATGGAAATGTGATAGATGATGGCCGCTTTGCGGGTTGGGACAGTCTTGCGCAGCTGGCTACAG GTCGTACCCAGTGTGCAACGTGCAACTCCTTCTTCTGTACCTGTGAGAAGGAAGCCGCGGATGACGATCGTCAAC GCCGTGAAGTGACCAACGAGGATTCCGCCTGTTGTGACAAGCCTAAAGTGCCTTCGGTGGATATGGGACAAGGGA ATTATGAATCGTCAGATTTTTTGGATTATTCAATGCTTGGGATAAACGATGTCTATCTCGACTCGGCGATGGATG TATTCCGAAGTCGCTCTCCGTCTTCATCTCCTAACTCGAATCCCGAATCTTTCTCTCAGATGCTTTCGACGCCGT TTGCCTACCCAGCCTTGGTCGAGAAGATGTCACCATCTCAACAGAGCATGTACATCAACGGTCGTGGATTTTACT CGGATCCTTACCTGAGTATGAGCTCCAACGAGCGTGGCGTCGACAATTTTGGGGTGCTTGATACTCCCACCCCGT TCATGCCGATGCAGGTGTCGAATCTGGATTATCCAGTCGAGAACTATGCCATTAGCAATCCCGACTCGGACTCGT CCTCTTATGATTCTGTAGATGACTTTGGGTCGCTGCCGTCTCAACAGCTGTCAGACAAGGCACCGCGGATGTCCG TGTCGCCCGTTCCTTTGGAAGGAATGCGGACTTTGTACTAA |