Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|116910
Gene name
Locationscaffold_09:1013957..1014833
Strand+
Gene length (bp)876
Transcript length (bp)669
Coding sequence length (bp)669
Protein length (aa) 223

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10342 Kre9_KNH Kre9/KNH-like N-terminal Ig-like domain 1.7E-09 24 118

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|116910
MFFNSFALLALAASPTLANVFITNPTSSTTFHGGQQATLNWQDDSKAPSLQDMGNCTVAIYVGNALQQTSLQTIV
ESVDVSKTSAIQFTPKPEIGPNSAEYFIRIDSLTAKDSASPQYPAMSFSAKFKMDGMTGTFSSAIEAQIAGQSTA
PLAGQTAPPAGAASPTGGASKTGGASSTSALQRTAASGSATPSNTASDNGAFSVKAGWAGILSSVFVYVAVL*
Coding >Agabi119p4|116910
ATGTTCTTCAACTCCTTCGCTCTTCTCGCCCTTGCCGCTTCTCCCACTTTGGCTAACGTCTTTATCACAAACCCA
ACGTCTTCTACCACTTTCCACGGTGGCCAACAAGCTACCCTCAACTGGCAAGATGATAGCAAGGCTCCTTCCCTC
CAAGATATGGGCAATTGTACGGTCGCTATCTACGTCGGTAACGCTCTGCAACAGACTTCGTTGCAAACCATTGTC
GAGAGTGTGGACGTTTCCAAAACTTCCGCTATCCAATTCACTCCCAAACCCGAGATCGGCCCTAACAGCGCTGAA
TACTTCATTCGGATTGACTCGCTTACCGCAAAGGATAGCGCAAGCCCACAATATCCTGCCATGTCCTTTTCAGCC
AAGTTCAAAATGGATGGGATGACGGGAACTTTCAGCAGTGCAATTGAAGCTCAGATCGCTGGTCAATCCACTGCC
CCTCTTGCTGGTCAGACAGCTCCTCCAGCTGGTGCGGCTTCTCCAACCGGCGGTGCTTCCAAAACTGGTGGTGCT
TCTTCAACTAGTGCTCTTCAGCGCACTGCTGCATCCGGATCGGCTACTCCCTCTAACACTGCCAGTGACAACGGT
GCTTTCAGCGTCAAGGCTGGATGGGCTGGTATACTATCAAGTGTATTTGTTTATGTCGCTGTCCTCTAA
Transcript >Agabi119p4|116910
ATGTTCTTCAACTCCTTCGCTCTTCTCGCCCTTGCCGCTTCTCCCACTTTGGCTAACGTCTTTATCACAAACCCA
ACGTCTTCTACCACTTTCCACGGTGGCCAACAAGCTACCCTCAACTGGCAAGATGATAGCAAGGCTCCTTCCCTC
CAAGATATGGGCAATTGTACGGTCGCTATCTACGTCGGTAACGCTCTGCAACAGACTTCGTTGCAAACCATTGTC
GAGAGTGTGGACGTTTCCAAAACTTCCGCTATCCAATTCACTCCCAAACCCGAGATCGGCCCTAACAGCGCTGAA
TACTTCATTCGGATTGACTCGCTTACCGCAAAGGATAGCGCAAGCCCACAATATCCTGCCATGTCCTTTTCAGCC
AAGTTCAAAATGGATGGGATGACGGGAACTTTCAGCAGTGCAATTGAAGCTCAGATCGCTGGTCAATCCACTGCC
CCTCTTGCTGGTCAGACAGCTCCTCCAGCTGGTGCGGCTTCTCCAACCGGCGGTGCTTCCAAAACTGGTGGTGCT
TCTTCAACTAGTGCTCTTCAGCGCACTGCTGCATCCGGATCGGCTACTCCCTCTAACACTGCCAGTGACAACGGT
GCTTTCAGCGTCAAGGCTGGATGGGCTGGTATACTATCAAGTGTATTTGTTTATGTCGCTGTCCTCTAA
Gene >Agabi119p4|116910
ATGTTCTTCAACTCCTTCGCTCTTCTCGCCCTTGCCGCTTCTCCCACTTTGGCTAACGTCTTTGTATGGATGACA
GAAATTTTTTGGAAAAGAGAATTTGAACATTGACACGTCGTCTAGATCACAAACCCAACGTCTTCTACCACTTTC
CACGGTGGCCAACAAGCTACCCTCAACTGGCAAGATGATAGCAAGGCTCCTTCCCTCCAAGATATGGGCAATTGT
ACGGTCGCTATCTACGTCGGTAACGCTCTGCAACAGGTACGTTCTTCCTTTTTACACGAGAATCCCCTTTTTGAC
GTGTCAAAGACTTCGTTGCAAACCATTGTCGAGAGTGTGGACGTTTCCAAAACTTCCGCTATCCAATTCACTCCC
AAACCCGAGATCGGCCCTAACAGCGCTGAATAGTGAGTAACTCTCTCATGATGACGTTGAATCGATCTCACGCGC
TTTCAGCTTCATTCGGATTGACTCGCTTACCGCAAAGGATAGCGCAAGCCCACAATATCCTGCCATGTCCTTTTC
AGCCAAGTTCAAGTGAGTCAAATTCCGCGCACATCGGAATATAGTGGCTGACCTCTTGTCTTTAGAATGGATGGG
ATGACGGGAACTTTCAGCAGTGCAATTGAAGCTCAGATCGCTGGTCAATCCACTGCCCCTCTTGCTGGTCAGACA
GCTCCTCCAGCTGGTGCGGCTTCTCCAACCGGCGGTGCTTCCAAAACTGGTGGTGCTTCTTCAACTAGTGCTCTT
CAGCGCACTGCTGCATCCGGATCGGCTACTCCCTCTAACACTGCCAGTGACAACGGTGCTTTCAGCGTCAAGGCT
GGATGGGCTGGTATACTATCAAGTGTATTTGTTTATGTCGCTGTCCTCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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