© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Agabi119p4|115750 |
| Gene name | |
| Location | scaffold_09:674107..675042 |
| Strand | + |
| Gene length (bp) | 935 |
| Transcript length (bp) | 726 |
| Coding sequence length (bp) | 726 |
| Protein length (aa) | 242 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF16015 | Promethin | Promethin | 4.2E-16 | 22 | 125 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q922Z1|TM159_MOUSE | Promethin OS=Mus musculus GN=Tmem159 PE=2 SV=1 | 39 | 161 | 9.0E-07 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 45 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 45 | 67 | 22 |
| 2 | 71 | 93 | 22 |
| 3 | 95 | 117 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Agabi119p4|115750 MSDRKATRYFDKSTSLVRDTFSQFEQQYARPAYSNMHVYFRERPITSTFVTVFTLLSLIPVAFFAGIASFIFATF TLAALFLAVAASSIVILACFAFLLCVLIGAFLLSLFLTGAALSSYALVRLAHHVQREGPSAGVSEWKKETKSAFL RSRPTTQDAADQGKKEPVLTIKPKDEYENEDSDQGGLPASLYEVDDQSDMTLRKEDEEDEEDVKGKGNMDARDFA TDIKDEEDGEMRRAHQ* |
| Coding | >Agabi119p4|115750 ATGTCTGACAGGAAAGCGACTCGGTACTTCGATAAGAGCACTTCCCTCGTTCGCGACACATTCTCTCAGTTCGAG CAGCAATATGCGCGGCCAGCATACAGTAATATGCATGTGTATTTTAGAGAACGTCCTATAACCTCAACATTTGTG ACTGTATTCACCCTCCTCAGCTTGATCCCCGTTGCCTTCTTTGCGGGCATCGCTTCATTCATCTTTGCTACCTTT ACTCTCGCAGCACTTTTCCTTGCCGTTGCAGCCTCGTCCATCGTGATCCTAGCTTGCTTCGCTTTTCTGTTATGC GTTTTAATCGGCGCCTTCTTACTCTCCCTCTTCCTCACCGGTGCGGCGCTCTCATCCTATGCCCTCGTCCGTCTC GCCCACCACGTCCAACGCGAGGGTCCTTCTGCAGGCGTCTCAGAATGGAAGAAAGAAACAAAATCCGCCTTTTTG CGTTCACGTCCGACGACCCAAGACGCTGCAGACCAAGGCAAAAAGGAGCCTGTTTTGACTATAAAACCTAAAGAT GAATACGAAAATGAGGACAGTGATCAAGGAGGGTTGCCGGCTAGCCTGTATGAAGTCGATGATCAGAGTGATATG ACGCTCAGAAAGGAGGACGAGGAGGACGAAGAGGATGTTAAAGGAAAAGGAAACATGGATGCGCGTGATTTTGCG ACTGATATCAAGGATGAAGAAGATGGTGAGATGCGACGAGCTCATCAATAA |
| Transcript | >Agabi119p4|115750 ATGTCTGACAGGAAAGCGACTCGGTACTTCGATAAGAGCACTTCCCTCGTTCGCGACACATTCTCTCAGTTCGAG CAGCAATATGCGCGGCCAGCATACAGTAATATGCATGTGTATTTTAGAGAACGTCCTATAACCTCAACATTTGTG ACTGTATTCACCCTCCTCAGCTTGATCCCCGTTGCCTTCTTTGCGGGCATCGCTTCATTCATCTTTGCTACCTTT ACTCTCGCAGCACTTTTCCTTGCCGTTGCAGCCTCGTCCATCGTGATCCTAGCTTGCTTCGCTTTTCTGTTATGC GTTTTAATCGGCGCCTTCTTACTCTCCCTCTTCCTCACCGGTGCGGCGCTCTCATCCTATGCCCTCGTCCGTCTC GCCCACCACGTCCAACGCGAGGGTCCTTCTGCAGGCGTCTCAGAATGGAAGAAAGAAACAAAATCCGCCTTTTTG CGTTCACGTCCGACGACCCAAGACGCTGCAGACCAAGGCAAAAAGGAGCCTGTTTTGACTATAAAACCTAAAGAT GAATACGAAAATGAGGACAGTGATCAAGGAGGGTTGCCGGCTAGCCTGTATGAAGTCGATGATCAGAGTGATATG ACGCTCAGAAAGGAGGACGAGGAGGACGAAGAGGATGTTAAAGGAAAAGGAAACATGGATGCGCGTGATTTTGCG ACTGATATCAAGGATGAAGAAGATGGTGAGATGCGACGAGCTCATCAATAA |
| Gene | >Agabi119p4|115750 ATGTCTGACAGGAAAGCGACTCGGTACTTCGATAAGAGCACTTCCCTCGTTCGCGACACATTCTCTCAGTGAGCG TTATGCTTATTTTCGAACAGCAGTATTCAGCGGTCACTAGGTTCGAGCAGCAATATGCGCGGCCAGCATACAGTA ATATGCATGTGTATTTTAGAGAACGTCCTATAACCTCAGTGAGCGCCGTTGTTTTTCGTGTCGGAAAGGAAAAAA TCTTGATGCTTCCTTCAGACATTTGTGACTGTATTCACCCTCCTCAGCTTGATCCCCGTTGCCTTCTTTGCGTAC GAGTATCTCTCTCACCGCATATCAAGTTGCAACGCTCATGCCTCGTTTAGGGGCATCGCTTCATTCATCTTTGCT ACCTTTACTCTCGCAGCACTTTTCCTTGCCGTTGCAGCCTCGTCCATCGTGATCCTAGCTTGCTGTAAGTTGTCC TTTACATTCAATGTGTCTCCTTGCCTCATCCCAGTCGCCCAGTCGCTTTTCTGTTATGCGTTTTAATCGGCGCCT TCTTACTCTCCCTCTTCCTCACCGGTGCGGCGCTCTCATCCTATGCCCTCGTCCGTCTCGCCCACCACGTCCAAC GCGAGGGTCCTTCTGCAGGCGTCTCAGAATGGAAGAAAGAAACAAAATCCGCCTTTTTGCGTTCACGTCCGACGA CCCAAGACGCTGCAGACCAAGGCAAAAAGGAGCCTGTTTTGACTATAAAACCTAAAGATGAATACGAAAATGAGG ACAGTGATCAAGGAGGGTTGCCGGCTAGCCTGTATGAAGTCGATGATCAGAGTGATATGACGCTCAGAAAGGAGG ACGAGGAGGACGAAGAGGATGTTAAAGGAAAAGGAAACATGGATGCGCGTGATTTTGCGACTGATATCAAGGATG AAGAAGATGGTGAGATGCGACGAGCTCATCAATAA |