© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Agabi119p4|115730 |
| Gene name | |
| Location | scaffold_09:670010..671731 |
| Strand | - |
| Gene length (bp) | 1721 |
| Transcript length (bp) | 1428 |
| Coding sequence length (bp) | 1428 |
| Protein length (aa) | 476 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03151 | TPT | Triose-phosphate Transporter family | 5.3E-28 | 84 | 241 |
| PF03151 | TPT | Triose-phosphate Transporter family | 1.3E-07 | 390 | 460 |
| PF00892 | EamA | EamA-like transporter family | 7.4E-07 | 97 | 213 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9LDH3|PT112_ARATH | Probable sugar phosphate/phosphate translocator At1g12500 OS=Arabidopsis thaliana GN=At1g12500 PE=1 SV=1 | 28 | 251 | 1.0E-14 |
| sp|Q8H0T6|PPT2_ARATH | Phosphoenolpyruvate/phosphate translocator 2, chloroplastic OS=Arabidopsis thaliana GN=PPT2 PE=2 SV=1 | 88 | 225 | 1.0E-14 |
| sp|P49131|TPT_FLAPR | Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria pringlei GN=TPT PE=2 SV=1 | 83 | 226 | 5.0E-14 |
| sp|Q69VR7|PPT1_ORYSJ | Phosphoenolpyruvate/phosphate translocator 1, chloroplastic OS=Oryza sativa subsp. japonica GN=PPT1 PE=2 SV=1 | 74 | 225 | 6.0E-14 |
| sp|Q5VQL3|PPT3_ORYSJ | Phosphoenolpyruvate/phosphate translocator 3, chloroplastic OS=Oryza sativa subsp. japonica GN=PPT3 PE=2 SV=1 | 86 | 257 | 6.0E-14 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9LDH3|PT112_ARATH | Probable sugar phosphate/phosphate translocator At1g12500 OS=Arabidopsis thaliana GN=At1g12500 PE=1 SV=1 | 28 | 251 | 1.0E-14 |
| sp|Q8H0T6|PPT2_ARATH | Phosphoenolpyruvate/phosphate translocator 2, chloroplastic OS=Arabidopsis thaliana GN=PPT2 PE=2 SV=1 | 88 | 225 | 1.0E-14 |
| sp|P49131|TPT_FLAPR | Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria pringlei GN=TPT PE=2 SV=1 | 83 | 226 | 5.0E-14 |
| sp|Q69VR7|PPT1_ORYSJ | Phosphoenolpyruvate/phosphate translocator 1, chloroplastic OS=Oryza sativa subsp. japonica GN=PPT1 PE=2 SV=1 | 74 | 225 | 6.0E-14 |
| sp|Q5VQL3|PPT3_ORYSJ | Phosphoenolpyruvate/phosphate translocator 3, chloroplastic OS=Oryza sativa subsp. japonica GN=PPT3 PE=2 SV=1 | 86 | 257 | 6.0E-14 |
| sp|Q84QU8|PPT2_ORYSJ | Phosphoenolpyruvate/phosphate translocator 2, chloroplastic OS=Oryza sativa subsp. japonica GN=PPT2 PE=2 SV=1 | 74 | 225 | 7.0E-14 |
| sp|Q9C521|UGAL1_ARATH | UDP-galactose transporter 1 OS=Arabidopsis thaliana GN=UDP-GALT1 PE=2 SV=1 | 86 | 250 | 2.0E-13 |
| sp|Q9FTT3|TPT_ORYSJ | Triose phosphate/phosphate translocator TPT, chloroplastic OS=Oryza sativa subsp. japonica GN=TPT PE=2 SV=1 | 83 | 226 | 2.0E-13 |
| sp|P49132|TPT_FLATR | Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria trinervia GN=TPT PE=2 SV=1 | 83 | 226 | 2.0E-13 |
| sp|Q9ZSR7|TPT_ARATH | Triose phosphate/phosphate translocator TPT, chloroplastic OS=Arabidopsis thaliana GN=TPT PE=1 SV=1 | 83 | 226 | 3.0E-13 |
| sp|Q6DBP3|PT505_ARATH | Probable sugar phosphate/phosphate translocator At5g05820 OS=Arabidopsis thaliana GN=At5g05820 PE=2 SV=1 | 89 | 247 | 3.0E-13 |
| sp|Q9SFE9|GONS5_ARATH | GDP-mannose transporter GONST5 OS=Arabidopsis thaliana GN=GONST5 PE=2 SV=1 | 86 | 250 | 4.0E-13 |
| sp|P52177|TPT1_BRAOB | Triose phosphate/phosphate translocator, chloroplastic OS=Brassica oleracea var. botrytis GN=TPT PE=2 SV=1 | 86 | 226 | 1.0E-12 |
| sp|P11869|TPT_SPIOL | Triose phosphate/phosphate translocator, chloroplastic OS=Spinacia oleracea PE=1 SV=1 | 88 | 226 | 1.0E-12 |
| sp|P21727|TPT_PEA | Triose phosphate/phosphate translocator, chloroplastic OS=Pisum sativum PE=1 SV=1 | 83 | 226 | 2.0E-12 |
| sp|P29463|TPT_SOLTU | Triose phosphate/phosphate translocator, chloroplastic OS=Solanum tuberosum GN=TPT PE=2 SV=1 | 83 | 225 | 2.0E-12 |
| sp|Q5XF09|PT311_ARATH | Probable sugar phosphate/phosphate translocator At3g11320 OS=Arabidopsis thaliana GN=At3g11320 PE=2 SV=1 | 89 | 247 | 2.0E-12 |
| sp|Q9SS40|PT310_ARATH | Probable sugar phosphate/phosphate translocator At3g10290 OS=Arabidopsis thaliana GN=At3g10290 PE=3 SV=1 | 86 | 247 | 2.0E-12 |
| sp|P49133|TPT_MAIZE | Triose phosphate/phosphate translocator, chloroplastic OS=Zea mays GN=TPT PE=1 SV=1 | 83 | 226 | 3.0E-12 |
| sp|Q9FYE5|PT504_ARATH | Probable sugar phosphate/phosphate translocator At5g04160 OS=Arabidopsis thaliana GN=At5g04160 PE=2 SV=1 | 89 | 295 | 4.0E-12 |
| sp|P52178|TPT2_BRAOB | Triose phosphate/phosphate translocator, non-green plastid, chloroplastic OS=Brassica oleracea var. botrytis GN=NGTPT PE=2 SV=1 | 88 | 226 | 6.0E-12 |
| sp|Q8RXN3|PPT1_ARATH | Phosphoenolpyruvate/phosphate translocator 1, chloroplastic OS=Arabidopsis thaliana GN=PPT1 PE=1 SV=1 | 88 | 225 | 1.0E-11 |
| sp|Q9LF61|XPT_ARATH | Xylulose 5-phosphate/phosphate translocator, chloroplastic OS=Arabidopsis thaliana GN=XPT PE=1 SV=1 | 88 | 244 | 8.0E-11 |
| sp|Q94B38|GPT2_ARATH | Glucose-6-phosphate/phosphate translocator 2, chloroplastic OS=Arabidopsis thaliana GN=GPT2 PE=2 SV=2 | 89 | 245 | 1.0E-09 |
| sp|Q9M5A9|GPT1_ARATH | Glucose-6-phosphate/phosphate translocator 1, chloroplastic OS=Arabidopsis thaliana GN=GPT1 PE=2 SV=1 | 89 | 245 | 4.0E-09 |
| sp|Q9VR50|S35E1_DROME | Solute carrier family 35 member E1 homolog OS=Drosophila melanogaster GN=CG14621 PE=2 SV=1 | 87 | 240 | 6.0E-08 |
| sp|Q550W6|FUCT1_DICDI | GDP-fucose transporter 1 OS=Dictyostelium discoideum GN=slc35c1 PE=3 SV=1 | 86 | 240 | 8.0E-08 |
| sp|Q96K37|S35E1_HUMAN | Solute carrier family 35 member E1 OS=Homo sapiens GN=SLC35E1 PE=1 SV=2 | 87 | 243 | 1.0E-07 |
| sp|Q3E6T0|PT525_ARATH | Probable sugar phosphate/phosphate translocator At5g25400 OS=Arabidopsis thaliana GN=At5g25400 PE=2 SV=1 | 85 | 245 | 1.0E-07 |
| sp|Q8C811|S35E2_MOUSE | Solute carrier family 35 member E2 OS=Mus musculus GN=Slc35e2 PE=2 SV=1 | 85 | 257 | 1.0E-07 |
| sp|P0CK96|S352B_HUMAN | Solute carrier family 35 member E2B OS=Homo sapiens GN=SLC35E2B PE=2 SV=1 | 84 | 257 | 2.0E-07 |
| sp|P0C6B1|S35E1_RAT | Solute carrier family 35 member E1 OS=Rattus norvegicus GN=Slc35e1 PE=3 SV=1 | 87 | 243 | 2.0E-07 |
| sp|Q9SUV2|PT432_ARATH | Probable sugar phosphate/phosphate translocator At4g32390 OS=Arabidopsis thaliana GN=At4g32390 PE=3 SV=1 | 85 | 245 | 5.0E-07 |
| sp|Q9LFN3|PT511_ARATH | Probable sugar phosphate/phosphate translocator At5g11230 OS=Arabidopsis thaliana GN=At5g11230 PE=2 SV=1 | 85 | 245 | 9.0E-07 |
| sp|Q9SKJ7|PT225_ARATH | Probable sugar phosphate/phosphate translocator At2g25520 OS=Arabidopsis thaliana GN=At2g25520 PE=1 SV=1 | 85 | 245 | 1.0E-06 |
| sp|Q6ICL7|S35E4_HUMAN | Solute carrier family 35 member E4 OS=Homo sapiens GN=SLC35E4 PE=2 SV=1 | 80 | 245 | 3.0E-06 |
| sp|Q8RXL8|Y1689_ARATH | Uncharacterized membrane protein At1g06890 OS=Arabidopsis thaliana GN=At1g06890 PE=1 SV=1 | 99 | 264 | 7.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016020 | membrane | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005575 | cellular_component | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 75 | 97 | 22 |
| 2 | 107 | 129 | 22 |
| 3 | 142 | 164 | 22 |
| 4 | 174 | 196 | 22 |
| 5 | 203 | 225 | 22 |
| 6 | 323 | 345 | 22 |
| 7 | 357 | 376 | 19 |
| 8 | 386 | 408 | 22 |
| 9 | 428 | 461 | 33 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Agabi119p4|115730 MASGDSPPVRSRKAVRLSSIHLGRRSYPKAVDFPPSPSPHADAFTPFPPDVLPEHTAPISLGHSRRNSLVIAQKT LQVPASPAFWVMLWFSLNFTLTLCNKLVLNKFPFPYSITAFHALGGCVGTWLTVRHEDRPPTMSRGQIAVLLSFS VLYTLNIVVSNVSLQLVTVPFHQVVRSSSPFFTLILSFLLLNSRVARSKMMSLIPVVLGVGLATYGDYYYTLSGF LLTLFGTFLASLKTVVTNILQSPYSHTYPDLKEPLCAHEDKPQHQHPDVRSTGRDRSSSISITVTLAPDNSEKTP SKHQTRLFPLSTVSSIPKLHLTPVQLLYLLSPLALFQCALLALYFGEIEEIINRFQLYRFTGLGPVVPLFNLGVG AGSEARTFGSMMPGVFGLVINASMAFALNVVSFHTNRKVGALGMSVAANVKQVLTIITSVGLFSLTITGMNCIGI FLTLLGGVWYAKVDYEEESSLSTKL* |
| Coding | >Agabi119p4|115730 ATGGCCAGCGGCGACTCTCCCCCAGTGCGAAGTCGGAAGGCGGTCAGGTTGTCCTCTATCCATTTGGGCAGGCGC TCTTATCCAAAGGCCGTCGATTTCCCCCCGTCACCATCTCCTCACGCCGACGCTTTCACGCCTTTCCCGCCCGAC GTTTTACCAGAGCACACTGCACCGATATCGCTGGGACATAGCCGCCGCAACTCTCTGGTCATTGCTCAAAAAACC CTCCAGGTTCCTGCCTCACCCGCCTTCTGGGTGATGCTTTGGTTTTCCCTCAACTTTACCCTGACGCTCTGCAAC AAACTCGTCTTGAACAAGTTTCCCTTCCCTTACAGTATAACCGCTTTCCATGCTCTTGGGGGTTGTGTTGGAACT TGGCTCACTGTTCGGCATGAGGACCGCCCGCCCACTATGTCTAGAGGCCAGATCGCCGTGCTGCTATCCTTCAGT GTCTTATACACGCTCAACATTGTTGTGAGCAATGTGTCTTTGCAGTTGGTCACTGTCCCGTTCCATCAAGTTGTT CGATCATCCTCACCGTTCTTCACCCTCATCCTGTCATTCCTGTTACTTAATTCTCGCGTTGCGCGCTCTAAAATG ATGTCCCTGATACCTGTTGTGCTCGGCGTGGGCCTTGCCACATACGGCGATTATTATTATACCCTCTCGGGATTT CTCCTTACACTCTTTGGCACGTTTCTTGCATCTCTCAAGACTGTGGTCACCAATATCTTGCAATCACCTTATTCG CATACATACCCTGATTTAAAAGAACCCTTGTGCGCTCACGAAGATAAGCCTCAGCATCAACATCCTGATGTCCGA TCTACGGGTCGTGACAGATCGTCTTCTATTTCTATCACCGTCACTTTAGCTCCTGATAACAGTGAGAAGACTCCG TCGAAACACCAAACCCGACTTTTCCCACTCTCAACTGTTTCGTCGATACCTAAACTCCACCTGACGCCTGTCCAA CTTTTATACCTTCTCTCTCCGCTCGCTCTCTTTCAATGCGCCCTCCTCGCTCTCTATTTCGGCGAAATAGAGGAA ATCATCAACCGATTTCAGCTTTATCGGTTCACTGGATTAGGTCCTGTCGTACCGTTGTTCAATTTGGGTGTTGGC GCTGGAAGTGAAGCTCGTACGTTTGGCTCGATGATGCCTGGGGTATTTGGGTTGGTGATCAATGCTTCTATGGCG TTTGCGCTCAATGTTGTGAGTTTTCATACAAATCGGAAGGTTGGGGCGTTGGGTATGAGTGTAGCTGCAAATGTG AAGCAGGTGTTGACGATAATCACGTCAGTGGGTTTGTTTAGCCTGACGATCACTGGGATGAATTGTATCGGCATT TTTTTGACGCTTCTTGGGGGTGTTTGGTATGCTAAAGTTGATTATGAAGAAGAGAGCAGCCTAAGCACAAAATTA TAG |
| Transcript | >Agabi119p4|115730 ATGGCCAGCGGCGACTCTCCCCCAGTGCGAAGTCGGAAGGCGGTCAGGTTGTCCTCTATCCATTTGGGCAGGCGC TCTTATCCAAAGGCCGTCGATTTCCCCCCGTCACCATCTCCTCACGCCGACGCTTTCACGCCTTTCCCGCCCGAC GTTTTACCAGAGCACACTGCACCGATATCGCTGGGACATAGCCGCCGCAACTCTCTGGTCATTGCTCAAAAAACC CTCCAGGTTCCTGCCTCACCCGCCTTCTGGGTGATGCTTTGGTTTTCCCTCAACTTTACCCTGACGCTCTGCAAC AAACTCGTCTTGAACAAGTTTCCCTTCCCTTACAGTATAACCGCTTTCCATGCTCTTGGGGGTTGTGTTGGAACT TGGCTCACTGTTCGGCATGAGGACCGCCCGCCCACTATGTCTAGAGGCCAGATCGCCGTGCTGCTATCCTTCAGT GTCTTATACACGCTCAACATTGTTGTGAGCAATGTGTCTTTGCAGTTGGTCACTGTCCCGTTCCATCAAGTTGTT CGATCATCCTCACCGTTCTTCACCCTCATCCTGTCATTCCTGTTACTTAATTCTCGCGTTGCGCGCTCTAAAATG ATGTCCCTGATACCTGTTGTGCTCGGCGTGGGCCTTGCCACATACGGCGATTATTATTATACCCTCTCGGGATTT CTCCTTACACTCTTTGGCACGTTTCTTGCATCTCTCAAGACTGTGGTCACCAATATCTTGCAATCACCTTATTCG CATACATACCCTGATTTAAAAGAACCCTTGTGCGCTCACGAAGATAAGCCTCAGCATCAACATCCTGATGTCCGA TCTACGGGTCGTGACAGATCGTCTTCTATTTCTATCACCGTCACTTTAGCTCCTGATAACAGTGAGAAGACTCCG TCGAAACACCAAACCCGACTTTTCCCACTCTCAACTGTTTCGTCGATACCTAAACTCCACCTGACGCCTGTCCAA CTTTTATACCTTCTCTCTCCGCTCGCTCTCTTTCAATGCGCCCTCCTCGCTCTCTATTTCGGCGAAATAGAGGAA ATCATCAACCGATTTCAGCTTTATCGGTTCACTGGATTAGGTCCTGTCGTACCGTTGTTCAATTTGGGTGTTGGC GCTGGAAGTGAAGCTCGTACGTTTGGCTCGATGATGCCTGGGGTATTTGGGTTGGTGATCAATGCTTCTATGGCG TTTGCGCTCAATGTTGTGAGTTTTCATACAAATCGGAAGGTTGGGGCGTTGGGTATGAGTGTAGCTGCAAATGTG AAGCAGGTGTTGACGATAATCACGTCAGTGGGTTTGTTTAGCCTGACGATCACTGGGATGAATTGTATCGGCATT TTTTTGACGCTTCTTGGGGGTGTTTGGTATGCTAAAGTTGATTATGAAGAAGAGAGCAGCCTAAGCACAAAATTA TAG |
| Gene | >Agabi119p4|115730 ATGGCCAGCGGCGACTCTCCCCCAGTGCGAAGTCGGAAGGCGGTCAGGTTGTCCTCTATCCATTTGGGCAGGCGC TCTTATCCAAAGGCCGTCGATTTCCCCCCGTCACCATCTCCTCACGCCGACGCTTTCACGCCTTTCCCGCCCGAC GTTTTACCAGAGCACACTGCACCGATATCGCTGGGACATAGCCGCCGCAACTCTCTGGTCATTGCTCAAAAAACC CTCCAGGTTCCTGCCTCACCCGCCTTCTGGGTGATGCTTTGGTTTTCCCTCAACTTTACCCTGACGCTCTGCAAC AAACTCGTCTTGAACAAGTTTCCCTTCCCTTACAGTATAACCGCTTTCCATGCTCTTGGGGGTTGTGTTGGAACT TGGCTCACTGTTCGGCATGAGGACCGCCCGCCCACTATGTCTAGAGGCCAGATCGCCGTGCTGCTATCCTTCAGT GTCTTATACACGCTCAACATTGTTGTGAGCAATGTGTCTTTGCAGTTGGTCACTGTCCCGGTGTGTTTTGATCTC TCCTTCCTGTCATTCACTCGCGCTCAATGCCTCCCACGGATAGTTCCATCAAGTTGTTCGATCATCCTCACCGTT CTTCACCCTCATCCTGTCATTCCTGTTACTTAATTCTCGCGTTGCGCGCTCTAAAATGATGTCCCTGATACCTGT TGTGCTCGGCGTGGGCCTTGCGTGAGTGTTTTCTCGATTATCCTATCAATCTGACACAGCGGAGTTTACACTTCG CTTCGTCTGTGGCATAATTCCATTCAACTGACGGTGCCGTCGATCTCGTTTTAGCACATACGGCGATTATTATTA TACCCTCTCGGGATTTCTCCTTACACTCTTTGGCACGTTTCTTGCATCTCTCAAGACTGTGGTCACCAATATCTT GCAATCACCTTATTCGCATACATACCCTGATTTAAAAGAACCCTTGTGCGCTCACGAAGATAAGCCTCAGCATCA ACATCCTGATGTCCGATCTACGGGTCGTGACAGATCGTCTTCTATTTCTATCACCGTCACTTTAGCTCCTGATAA CAGTGAGAAGACTCCGTCGAAACACCAAACCCGACTTTTCCCACTCTCAACTGTTTCGTCGATACCTAAACTCCA CCTGACGCCTGTCCAACTTTTATACCTTCTCTCTCCGCTCGCTCTCTTTCAATGCGCCCTCCTCGCTCTCTATTT CGGCGAAATAGAGGAAATCATCAACCGATTTCAGCTTTATCGGTTCACTGGATTAGGTCCTGTCGTACCGTTGTT CAATTTGGGTAACAGCAATTTAACAATGCATGTCGACGCGCTGAATAATGCAACTGTGGTGGCAGGTGTTGGCGC TGGAAGTGAAGCTCGTACGTTTGGCTCGATGATGCCTGGGGTATTTGGGTTGGTGATCAATGCTTCTATGGCGTT TGCGCTCAATGTTGTGAGTTTTCATACAAATCGGAAGGTTGGGGCGTTGGGTATGAGTGTAGCTGGTATGTTCTT TTCGATTTCACTTTTTTCTTGTTTTGATTCCTTGTTTTTTGACTTGGCGTTGTTTTATAGCAAATGTGAAGCAGG TGTTGACGATAATCACGTCAGTGGGTTTGTTTAGCCTGACGATCACTGGGATGAATTGTATCGGCATTTTTTTGA CGCTTCTTGGGGGTGTTTGGTATGCTAAAGTTGATTATGAAGAAGAGAGCAGCCTAAGCACAAAATTATAG |