Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|114720
Gene name
Locationscaffold_09:421276..422292
Strand+
Gene length (bp)1016
Transcript length (bp)903
Coding sequence length (bp)903
Protein length (aa) 301

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 17 0.5

Transmembrane Domains

Domain # Start End Length
1 4 26 22
2 46 68 22
3 88 107 19
4 240 262 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|114720
MIFLLFIFTLVAGLLEAPMSPVRFFYRDPLAIILYTRCEDDCMLVFHTQFILSLIMSCMTTICLTTAVAAHPDIP
GPGESSYSSLKKFIWPIIFPFGMLLKAFRQLLAARTIAQLYNEARREEVDNLKSLDSERNLRRSSLSKSHSDAQS
APPMEWTQTHGFYVVMGGLMLYKDKQPLYTLQYSTVERLHRTRQIDLPAISKRDILNRSKDGIVSKAMALFQVIY
FIQDYVRRWKRERSVIDLELVTMVYIVINALTFVLYWHKPFYILHPTKVQLKEPDKLYRKKHFTRKSLTNSQSSS
*
Coding >Agabi119p4|114720
ATGATCTTCCTCCTGTTTATTTTCACGCTCGTCGCTGGTCTTCTCGAGGCGCCGATGTCACCTGTCCGCTTTTTC
TACCGGGACCCGCTCGCCATTATACTATACACTCGTTGCGAAGACGATTGCATGCTCGTGTTCCACACTCAGTTC
ATCCTAAGCCTCATCATGAGCTGCATGACGACGATTTGCCTGACCACTGCTGTCGCCGCACATCCGGACATACCA
GGTCCCGGAGAGAGCTCGTATAGCAGCTTAAAGAAGTTTATATGGCCCATAATTTTCCCTTTTGGCATGCTGCTC
AAGGCCTTTAGGCAGTTGCTCGCTGCGCGAACGATCGCACAGTTGTATAATGAAGCGAGACGGGAAGAGGTAGAC
AACCTGAAATCGCTGGATTCTGAGCGAAATTTACGCAGGAGTTCTCTATCAAAATCACATTCCGATGCGCAATCT
GCTCCCCCCATGGAATGGACACAGACGCACGGATTTTATGTCGTAATGGGTGGGCTCATGCTTTACAAAGATAAA
CAACCGTTATACACTCTCCAGTACTCGACCGTGGAACGCCTACATCGTACGAGACAGATCGATCTTCCAGCCATC
TCGAAAAGAGATATTTTGAACCGTAGCAAGGATGGAATCGTATCCAAAGCTATGGCCCTGTTCCAAGTCATATAT
TTCATTCAGGATTACGTGCGGCGGTGGAAGCGGGAACGATCAGTCATCGACCTCGAGCTCGTTACAATGGTATAC
ATTGTTATCAACGCCTTGACGTTCGTGCTCTATTGGCATAAGCCATTCTACATCCTGCATCCAACCAAAGTCCAG
CTCAAGGAACCAGACAAGTTATATAGGAAAAAACATTTCACTAGAAAATCATTGACCAATTCACAATCATCATCA
TAG
Transcript >Agabi119p4|114720
ATGATCTTCCTCCTGTTTATTTTCACGCTCGTCGCTGGTCTTCTCGAGGCGCCGATGTCACCTGTCCGCTTTTTC
TACCGGGACCCGCTCGCCATTATACTATACACTCGTTGCGAAGACGATTGCATGCTCGTGTTCCACACTCAGTTC
ATCCTAAGCCTCATCATGAGCTGCATGACGACGATTTGCCTGACCACTGCTGTCGCCGCACATCCGGACATACCA
GGTCCCGGAGAGAGCTCGTATAGCAGCTTAAAGAAGTTTATATGGCCCATAATTTTCCCTTTTGGCATGCTGCTC
AAGGCCTTTAGGCAGTTGCTCGCTGCGCGAACGATCGCACAGTTGTATAATGAAGCGAGACGGGAAGAGGTAGAC
AACCTGAAATCGCTGGATTCTGAGCGAAATTTACGCAGGAGTTCTCTATCAAAATCACATTCCGATGCGCAATCT
GCTCCCCCCATGGAATGGACACAGACGCACGGATTTTATGTCGTAATGGGTGGGCTCATGCTTTACAAAGATAAA
CAACCGTTATACACTCTCCAGTACTCGACCGTGGAACGCCTACATCGTACGAGACAGATCGATCTTCCAGCCATC
TCGAAAAGAGATATTTTGAACCGTAGCAAGGATGGAATCGTATCCAAAGCTATGGCCCTGTTCCAAGTCATATAT
TTCATTCAGGATTACGTGCGGCGGTGGAAGCGGGAACGATCAGTCATCGACCTCGAGCTCGTTACAATGGTATAC
ATTGTTATCAACGCCTTGACGTTCGTGCTCTATTGGCATAAGCCATTCTACATCCTGCATCCAACCAAAGTCCAG
CTCAAGGAACCAGACAAGTTATATAGGAAAAAACATTTCACTAGAAAATCATTGACCAATTCACAATCATCATCA
TAG
Gene >Agabi119p4|114720
ATGATCTTCCTCCTGTTTATTTTCACGCTCGTCGCTGGTCTTCTCGAGGCGCCGATGTCACCTGTCCGCTTTTTC
TACCGGGACCCGCTCGCCATTATACTATACACTCGTTGCGAAGACGATTGCATGCTCGTGTTCCACACTCAGTTC
ATCCTAAGCCTCATCATGAGCTGCATGACGACGATTTGCCTGACCACTGCTGTCGCCGCACATCCGGACATACCA
GGTCCCGGAGAGAGCTCGTATAGCAGCTTAAAGAAGTTTATATGGCCCATAATTTTCCCTTTTGGCATGCTGCTC
AAGGCCTTTAGGCAGTTGCTCGCTGCGCGAACGATCGCACAGTTGTATAATGAAGCGAGACGGGAAGAGGTAGGT
GAGTTGATCGAGAATTCGTTGTATGAAAGCCATACGGTTAACGCACGAGCACCTGTGATAGACAACCTGAAATCG
CTGGATTCTGAGCGAAATTTACGCAGGAGTTCTCTATCAAAATCACATTCCGATGCGCAATGTACGTCAACACAC
ATCTCCCCCTGCTTATTATTGACTGAATGAATCTAGCTGCTCCCCCCATGGAATGGACACAGACGCACGGATTTT
ATGTCGTAATGGGTGGGCTCATGCTTTACAAAGATAAACAACCGTTATACACTCTCCAGTACTCGACCGTGGAAC
GCCTACATCGTACGAGACAGATCGATCTTCCAGCCATCTCGAAAAGAGATATTTTGAACCGTAGCAAGGATGGAA
TCGTATCCAAAGCTATGGCCCTGTTCCAAGTCATATATTTCATTCAGGATTACGTGCGGCGGTGGAAGCGGGAAC
GATCAGTCATCGACCTCGAGCTCGTTACAATGGTATACATTGTTATCAACGCCTTGACGTTCGTGCTCTATTGGC
ATAAGCCATTCTACATCCTGCATCCAACCAAAGTCCAGCTCAAGGAACCAGACAAGTTATATAGGAAAAAACATT
TCACTAGAAAATCATTGACCAATTCACAATCATCATCATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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