Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|113410
Gene name
Locationscaffold_08:1810140..1811398
Strand+
Gene length (bp)1258
Transcript length (bp)1005
Coding sequence length (bp)1005
Protein length (aa) 335

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00400 WD40 WD domain, G-beta repeat 2.7E-06 89 124
PF00400 WD40 WD domain, G-beta repeat 1.9E-04 224 265

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9LJN8|BUB31_ARATH Mitotic checkpoint protein BUB3.1 OS=Arabidopsis thaliana GN=BUB3.1 PE=1 SV=1 7 329 8.0E-102
sp|Q9C701|BUB32_ARATH Mitotic checkpoint protein BUB3.2 OS=Arabidopsis thaliana GN=BUB3.2 PE=2 SV=1 7 329 2.0E-101
sp|Q1JQB2|BUB3_BOVIN Mitotic checkpoint protein BUB3 OS=Bos taurus GN=BUB3 PE=2 SV=1 7 329 5.0E-92
sp|Q9WVA3|BUB3_MOUSE Mitotic checkpoint protein BUB3 OS=Mus musculus GN=Bub3 PE=1 SV=2 7 329 5.0E-92
sp|O43684|BUB3_HUMAN Mitotic checkpoint protein BUB3 OS=Homo sapiens GN=BUB3 PE=1 SV=1 7 329 8.0E-92
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Swissprot ID Swissprot Description Start End E-value
sp|Q9LJN8|BUB31_ARATH Mitotic checkpoint protein BUB3.1 OS=Arabidopsis thaliana GN=BUB3.1 PE=1 SV=1 7 329 8.0E-102
sp|Q9C701|BUB32_ARATH Mitotic checkpoint protein BUB3.2 OS=Arabidopsis thaliana GN=BUB3.2 PE=2 SV=1 7 329 2.0E-101
sp|Q1JQB2|BUB3_BOVIN Mitotic checkpoint protein BUB3 OS=Bos taurus GN=BUB3 PE=2 SV=1 7 329 5.0E-92
sp|Q9WVA3|BUB3_MOUSE Mitotic checkpoint protein BUB3 OS=Mus musculus GN=Bub3 PE=1 SV=2 7 329 5.0E-92
sp|O43684|BUB3_HUMAN Mitotic checkpoint protein BUB3 OS=Homo sapiens GN=BUB3 PE=1 SV=1 7 329 8.0E-92
sp|Q5RB58|BUB3_PONAB Mitotic checkpoint protein BUB3 OS=Pongo abelii GN=BUB3 PE=2 SV=1 7 329 1.0E-89
sp|Q9YGY3|BUB3_XENLA Mitotic checkpoint protein BUB3 OS=Xenopus laevis GN=bub3 PE=1 SV=1 7 329 7.0E-87
sp|Q54DM1|BUB3_DICDI Mitotic checkpoint protein bub3 OS=Dictyostelium discoideum GN=bub3 PE=3 SV=1 10 307 5.0E-77
sp|O42860|BUB3_SCHPO Mitotic checkpoint protein bub3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=bub3 PE=1 SV=1 1 297 6.0E-74
sp|P40066|GLE2_YEAST Nucleoporin GLE2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GLE2 PE=1 SV=1 1 329 2.0E-64
sp|G0SEA3|GLE2_CHATD Nucleoporin GLE2 OS=Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719) GN=GLE2 PE=3 SV=1 1 329 3.0E-63
sp|P41838|RAE1_SCHPO Poly(A)+ RNA export protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rae1 PE=1 SV=1 7 329 2.0E-62
sp|Q7ZWF0|RAE1L_DANRE mRNA export factor OS=Danio rerio GN=rae1 PE=2 SV=2 9 329 7.0E-60
sp|Q5RF99|RAEL1_PONAB mRNA export factor OS=Pongo abelii GN=RAE1 PE=2 SV=1 9 329 1.0E-58
sp|P78406|RAE1L_HUMAN mRNA export factor OS=Homo sapiens GN=RAE1 PE=1 SV=1 9 329 1.0E-58
sp|Q4R6D2|RAE1L_MACFA mRNA export factor OS=Macaca fascicularis GN=RAE1 PE=2 SV=1 9 329 1.0E-58
sp|Q38942|RAE1_ARATH Protein RAE1 OS=Arabidopsis thaliana GN=RAE1 PE=1 SV=2 11 332 1.0E-58
sp|A5GFN6|RAEL1_PIG mRNA export factor OS=Sus scrofa GN=RAE1 PE=3 SV=1 9 329 2.0E-58
sp|Q5E9A4|RAE1L_BOVIN mRNA export factor OS=Bos taurus GN=RAE1 PE=2 SV=1 9 330 2.0E-58
sp|Q5FVA9|RAE1L_XENTR mRNA export factor OS=Xenopus tropicalis GN=rae1 PE=2 SV=1 9 330 3.0E-58
sp|Q8C570|RAE1L_MOUSE mRNA export factor OS=Mus musculus GN=Rae1 PE=1 SV=1 9 330 6.0E-58
sp|Q3SWS8|RAE1L_RAT mRNA export factor OS=Rattus norvegicus GN=Rae1 PE=1 SV=1 9 329 8.0E-58
sp|Q93454|RAE1_CAEEL mRNA export factor rae-1 OS=Caenorhabditis elegans GN=rae-1 PE=1 SV=1 3 329 4.0E-51
sp|F4I241|BUB33_ARATH Mitotic checkpoint protein BUB3.3 OS=Arabidopsis thaliana GN=BUB3.3 PE=2 SV=1 2 322 1.0E-43
sp|P26449|BUB3_YEAST Cell cycle arrest protein BUB3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BUB3 PE=1 SV=1 7 279 3.0E-32
sp|Q8JZX3|POC1A_MOUSE POC1 centriolar protein homolog A OS=Mus musculus GN=Poc1a PE=2 SV=2 47 294 7.0E-13
sp|P49695|PKWA_THECU Probable serine/threonine-protein kinase PkwA OS=Thermomonospora curvata GN=pkwA PE=3 SV=1 13 264 1.0E-12
sp|Q2TBP4|POC1A_BOVIN POC1 centriolar protein homolog A OS=Bos taurus GN=POC1A PE=2 SV=1 47 299 1.0E-11
sp|Q8NBT0|POC1A_HUMAN POC1 centriolar protein homolog A OS=Homo sapiens GN=POC1A PE=1 SV=2 47 294 2.0E-10
sp|Q8TC44|POC1B_HUMAN POC1 centriolar protein homolog B OS=Homo sapiens GN=POC1B PE=1 SV=1 95 294 5.0E-10
sp|Q9VU65|POC1_DROME POC1 centriolar protein homolog OS=Drosophila melanogaster GN=Poc1 PE=2 SV=1 47 299 7.0E-10
sp|Q9D994|WDR38_MOUSE WD repeat-containing protein 38 OS=Mus musculus GN=Wdr38 PE=2 SV=1 24 301 9.0E-10
sp|Q7T0P4|POC1A_XENLA POC1 centriolar protein homolog A OS=Xenopus laevis GN=poc1a PE=1 SV=2 47 294 1.0E-09
sp|Q8BHD1|POC1B_MOUSE POC1 centriolar protein homolog B OS=Mus musculus GN=Poc1b PE=2 SV=1 95 299 2.0E-09
sp|Q5RD06|POC1B_PONAB POC1 centriolar protein homolog B OS=Pongo abelii GN=POC1B PE=2 SV=1 95 288 3.0E-09
sp|Q5JTN6|WDR38_HUMAN WD repeat-containing protein 38 OS=Homo sapiens GN=WDR38 PE=2 SV=1 24 315 3.0E-09
sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=alr3466 PE=3 SV=1 28 299 5.0E-09
sp|Q28I85|POC1A_XENTR POC1 centriolar protein homolog A OS=Xenopus tropicalis GN=poc1a PE=2 SV=1 47 294 2.0E-08
sp|Q9AV81|PRP19_ORYSJ Pre-mRNA-processing factor 19 OS=Oryza sativa subsp. japonica GN=PRP19 PE=2 SV=1 72 301 2.0E-08
sp|Q8YTC2|Y2800_NOSS1 Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=alr2800 PE=3 SV=1 13 279 2.0E-08
sp|D3ZW91|POC1B_RAT POC1 centriolar protein homolog B OS=Rattus norvegicus GN=Poc1b PE=3 SV=1 95 299 3.0E-08
sp|F6ZT52|POC1B_XENTR POC1 centriolar protein homolog B OS=Xenopus tropicalis GN=poc1b PE=2 SV=1 95 294 3.0E-08
sp|Q9P775|YBEG_SCHPO Uncharacterized WD repeat-containing protein C17D11.16 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1711.16 PE=1 SV=1 55 274 4.0E-08
sp|Q4V7Z1|POC1B_XENLA POC1 centriolar protein homolog B OS=Xenopus laevis GN=poc1b PE=1 SV=1 47 294 5.0E-08
sp|Q5JTN6|WDR38_HUMAN WD repeat-containing protein 38 OS=Homo sapiens GN=WDR38 PE=2 SV=1 18 128 9.0E-08
sp|Q9W328|LST8_DROME Protein LST8 homolog OS=Drosophila melanogaster GN=Lst8 PE=2 SV=2 108 320 1.0E-07
sp|A2CEH0|POC1B_DANRE POC1 centriolar protein homolog B OS=Danio rerio GN=poc1b PE=2 SV=1 47 299 2.0E-07
sp|Q9ERG2|STRN3_MOUSE Striatin-3 OS=Mus musculus GN=Strn3 PE=1 SV=1 12 264 3.0E-07
sp|P41318|LST8_YEAST Target of rapamycin complex subunit LST8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=LST8 PE=1 SV=1 111 303 3.0E-07
sp|P58405|STRN3_RAT Striatin-3 OS=Rattus norvegicus GN=Strn3 PE=1 SV=2 12 264 4.0E-07
sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=alr3466 PE=3 SV=1 24 297 6.0E-07
sp|O76734|TUP1_DICDI General transcriptional corepressor tupA OS=Dictyostelium discoideum GN=tupA PE=2 SV=1 24 139 6.0E-07
sp|Q7ZVF0|POC1A_DANRE POC1 centriolar protein homolog A OS=Danio rerio GN=poc1a PE=2 SV=1 47 294 9.0E-07
sp|O74855|NLE1_SCHPO Ribosome assembly protein 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC18.05c PE=3 SV=1 15 272 1.0E-06
sp|Q00808|HETE1_PODAS Vegetative incompatibility protein HET-E-1 OS=Podospora anserina GN=HET-E1 PE=3 SV=1 24 297 1.0E-06
sp|A5D7H2|STRN3_BOVIN Striatin-3 OS=Bos taurus GN=STRN3 PE=2 SV=1 12 264 2.0E-06
sp|P78706|RCO1_NEUCR Transcriptional repressor rco-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=rco-1 PE=3 SV=2 24 137 2.0E-06
sp|Q9V3J8|WDS_DROME Protein will die slowly OS=Drosophila melanogaster GN=wds PE=1 SV=1 14 166 2.0E-06
sp|Q25306|GBLP_LEIMA Guanine nucleotide-binding protein subunit beta-like protein OS=Leishmania major PE=2 SV=1 15 139 3.0E-06
sp|Q29HG9|LST8_DROPS Protein LST8 homolog OS=Drosophila pseudoobscura pseudoobscura GN=GA15597 PE=3 SV=1 111 302 3.0E-06
sp|P62883|GBLP_LEICH Guanine nucleotide-binding protein subunit beta-like protein OS=Leishmania chagasi PE=2 SV=1 15 139 3.0E-06
sp|P62884|GBLP_LEIIN Guanine nucleotide-binding protein subunit beta-like protein OS=Leishmania infantum GN=LACK1 PE=2 SV=1 15 139 3.0E-06
sp|Q96DI7|SNR40_HUMAN U5 small nuclear ribonucleoprotein 40 kDa protein OS=Homo sapiens GN=SNRNP40 PE=1 SV=1 15 126 4.0E-06
sp|Q6PE01|SNR40_MOUSE U5 small nuclear ribonucleoprotein 40 kDa protein OS=Mus musculus GN=Snrnp40 PE=1 SV=1 15 126 4.0E-06
sp|Q5RF51|SNR40_PONAB U5 small nuclear ribonucleoprotein 40 kDa protein OS=Pongo abelii GN=SNRNP40 PE=2 SV=1 15 126 4.0E-06
sp|Q4V7Y7|KTNB1_XENLA Katanin p80 WD40 repeat-containing subunit B1 OS=Xenopus laevis GN=katnb1 PE=1 SV=1 89 297 4.0E-06
sp|Q2HJH6|SNR40_BOVIN U5 small nuclear ribonucleoprotein 40 kDa protein OS=Bos taurus GN=SNRNP40 PE=2 SV=1 15 126 4.0E-06
sp|O74184|WAT1_SCHPO WD repeat-containing protein wat1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=wat1 PE=1 SV=1 111 317 5.0E-06
sp|Q5ZIU8|KTNB1_CHICK Katanin p80 WD40 repeat-containing subunit B1 OS=Gallus gallus GN=KATNB1 PE=2 SV=2 89 307 6.0E-06
sp|Q13033|STRN3_HUMAN Striatin-3 OS=Homo sapiens GN=STRN3 PE=1 SV=3 12 264 7.0E-06
sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=alr3466 PE=3 SV=1 15 297 8.0E-06
sp|Q9UTC7|YIDC_SCHPO Uncharacterized WD repeat-containing protein C227.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC227.12 PE=3 SV=1 15 139 8.0E-06
sp|Q9FKT5|THOC3_ARATH THO complex subunit 3 OS=Arabidopsis thaliana GN=THO3 PE=1 SV=1 55 295 9.0E-06
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GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0003674 molecular_function No
GO:0005488 binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 18 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|113410
MADSTTLPSPPFDSVSALHFAPSSPDRLLVSSWDTTVRYYDTSDTAPELKAKFDHRAAVLACAFSDDAHGYSGGL
DTSVRELDLATEKITNLGQHADTISSMSWSNSQNCLITGSWDRTLRFWDPRLAQTSSQTQSHSTPERIYHLDLID
TTLVIAMASRLFHIYDLRNMSSPTQQRESSLKYMTRSLACMPDGQGYATASTEGRIAVEYFDPSPTSQEKKYAFK
CHRQTVDDVDRVWPVNALAFHPVYNTFASAGSDGTVSIWDHKVKKRLRQYPKLNTPLSAIAFNKEGTKLAMGVSY
TWDEGERGLKTAQQPMIVIRKLGDEVKPKGWPGN*
Coding >Agabi119p4|113410
ATGGCTGACTCGACCACGCTGCCCTCACCGCCTTTTGACTCCGTCTCTGCCCTCCATTTTGCGCCATCCAGCCCA
GACCGCCTTCTCGTCTCCTCCTGGGACACGACAGTCAGATACTACGACACCTCCGACACTGCTCCAGAACTCAAA
GCAAAATTTGATCACCGCGCTGCTGTCCTCGCGTGTGCATTTTCAGATGACGCGCATGGCTACAGTGGAGGACTT
GATACCTCTGTTCGCGAACTCGATTTGGCCACCGAAAAGATCACAAACTTGGGCCAACATGCGGATACCATCTCG
TCCATGTCCTGGTCCAACTCCCAAAACTGCTTAATAACAGGATCCTGGGACCGCACCCTCCGTTTCTGGGATCCA
CGTCTCGCCCAAACGTCCTCCCAAACCCAATCCCACAGCACCCCAGAACGTATCTACCATCTCGACCTCATCGAC
ACCACCCTCGTCATCGCCATGGCTTCTCGTCTCTTTCACATCTACGACCTCCGAAACATGTCTTCCCCAACTCAA
CAACGCGAATCCTCACTCAAATACATGACTCGTTCTCTCGCTTGCATGCCTGACGGTCAAGGTTACGCAACAGCT
TCTACAGAAGGTCGTATCGCCGTTGAATATTTCGATCCTTCACCGACTTCTCAAGAAAAGAAATACGCTTTTAAA
TGTCATAGACAAACGGTGGATGATGTGGATCGGGTTTGGCCGGTGAATGCATTGGCTTTTCATCCAGTGTATAAT
ACGTTTGCGTCTGCGGGTTCGGATGGGACGGTGTCGATTTGGGATCACAAAGTCAAGAAAAGGTTACGTCAGTAT
CCGAAATTGAATACACCCCTTTCGGCTATTGCGTTTAATAAAGAGGGAACAAAGTTGGCAATGGGGGTGAGTTAT
ACGTGGGATGAAGGGGAGAGGGGCCTCAAGACGGCACAACAACCGATGATTGTCATTAGGAAACTGGGCGATGAA
GTCAAGCCCAAGGGTTGGCCAGGGAATTAG
Transcript >Agabi119p4|113410
ATGGCTGACTCGACCACGCTGCCCTCACCGCCTTTTGACTCCGTCTCTGCCCTCCATTTTGCGCCATCCAGCCCA
GACCGCCTTCTCGTCTCCTCCTGGGACACGACAGTCAGATACTACGACACCTCCGACACTGCTCCAGAACTCAAA
GCAAAATTTGATCACCGCGCTGCTGTCCTCGCGTGTGCATTTTCAGATGACGCGCATGGCTACAGTGGAGGACTT
GATACCTCTGTTCGCGAACTCGATTTGGCCACCGAAAAGATCACAAACTTGGGCCAACATGCGGATACCATCTCG
TCCATGTCCTGGTCCAACTCCCAAAACTGCTTAATAACAGGATCCTGGGACCGCACCCTCCGTTTCTGGGATCCA
CGTCTCGCCCAAACGTCCTCCCAAACCCAATCCCACAGCACCCCAGAACGTATCTACCATCTCGACCTCATCGAC
ACCACCCTCGTCATCGCCATGGCTTCTCGTCTCTTTCACATCTACGACCTCCGAAACATGTCTTCCCCAACTCAA
CAACGCGAATCCTCACTCAAATACATGACTCGTTCTCTCGCTTGCATGCCTGACGGTCAAGGTTACGCAACAGCT
TCTACAGAAGGTCGTATCGCCGTTGAATATTTCGATCCTTCACCGACTTCTCAAGAAAAGAAATACGCTTTTAAA
TGTCATAGACAAACGGTGGATGATGTGGATCGGGTTTGGCCGGTGAATGCATTGGCTTTTCATCCAGTGTATAAT
ACGTTTGCGTCTGCGGGTTCGGATGGGACGGTGTCGATTTGGGATCACAAAGTCAAGAAAAGGTTACGTCAGTAT
CCGAAATTGAATACACCCCTTTCGGCTATTGCGTTTAATAAAGAGGGAACAAAGTTGGCAATGGGGGTGAGTTAT
ACGTGGGATGAAGGGGAGAGGGGCCTCAAGACGGCACAACAACCGATGATTGTCATTAGGAAACTGGGCGATGAA
GTCAAGCCCAAGGGTTGGCCAGGGAATTAG
Gene >Agabi119p4|113410
ATGGCTGGTTTGTTATTTTTTTTGTGATTACGGTGTGCTAAACTGACGGTGTTGCCAGACTCGACCACGCTGCCC
TCACCGCCTTTTGACTCCGTCTCTGCCCTCCATTTTGCGCCATCCAGCCCAGACCGCCTTCTCGTCTCCTCCTGG
GACACGGTATCTCTTTCCTTTTCTCGTCCGATTTATCTTCTCAACGTTTGCGCAGACAGTCAGATACTACGACAC
CTCCGACACTGCTCCAGAACTCAAAGCAAAATTTGATCACCGCGCTGCTGTCCTCGCGTGTGCATTTTCAGATGA
CGCGCATGGCTACAGTGGAGGACTTGATACCTCTGTTCGCGAGTATGTTCGCGTCTTCTGTACACACACACGATA
CTCACTAGGTCTAGACTCGATTTGGCCACCGAAAAGATCACAAACTTGGGCCAACATGCGGATACCATCTCGTCC
ATGTCCTGGTCCAACTCCCAAAGTTCGCTTCCTTTCTCCCTCCCTAACCCTCCACACATCTCAATTTCATTCTTC
TAGACTGCTTAATAACAGGATCCTGGGACCGCACCCTCCGTTTCTGGGATCCACGTCTCGCCCAAACGTCCTCCC
AAACCCAATCCCACAGCACCCCAGAACGTATCTACCATCTCGACCTCATCGACACCACCCTCGTCATCGCCATGG
CTTCTCGTCTCTTTCACATCTACGACCTCCGAAACATGTCTTCCCCAACTCAACAACGCGAATCCTCACTCAAAT
ACATGACTCGTTCTCTCGCTTGCATGCCTGACGGTCAAGGTTACGCAACAGCTTCTACAGAAGGTCGTATCGCCG
TTGAATATTTCGATCCTTCACCGACTTCTCAAGAAAAGAAATACGCTTTTAAATGTCATAGACAAACGGTGGATG
ATGTGGATCGGGTTTGGCCGGTGAATGCATTGGCTTTTCATCCAGTGTATAATACGTTTGCGTCTGCGGGTTCGG
ATGGGACGGTGTCGATTTGGGATCACAAAGTCAAGAAAAGGTTACGTCAGTATCCGAAATTGAATACACCCCTTT
CGGCTATTGCGTTTAATAAAGAGGGAACAAAGTTGGCAATGGGGGTGAGTTATACGTGGGATGAAGGGGAGAGGG
GCCTCAAGACGGCACAACAACCGATGATTGTCATTAGGAAACTGGGCGATGAAGTCAAGGTGAGTTTGCACCAGC
TTTTGTTCTTAACTTTTTTCTTATGTTCTTTTAGCCCAAGGGTTGGCCAGGGAATTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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