© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Agabi119p4|112950 |
| Gene name | |
| Location | scaffold_08:1728967..1730287 |
| Strand | + |
| Gene length (bp) | 1320 |
| Transcript length (bp) | 888 |
| Coding sequence length (bp) | 888 |
| Protein length (aa) | 296 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05153 | MIOX | Myo-inositol oxygenase | 1.4E-122 | 49 | 295 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q5Z8T3|MIOX_ORYSJ | Probable inositol oxygenase OS=Oryza sativa subsp. japonica GN=Os06g0561000 PE=2 SV=1 | 41 | 295 | 5.0E-93 |
| sp|Q54GH4|MIOX_DICDI | Inositol oxygenase OS=Dictyostelium discoideum GN=miox PE=3 SV=1 | 33 | 295 | 7.0E-93 |
| sp|O82200|MIOX2_ARATH | Inositol oxygenase 2 OS=Arabidopsis thaliana GN=MIOX2 PE=2 SV=2 | 41 | 295 | 3.0E-90 |
| sp|Q8L799|MIOX1_ARATH | Inositol oxygenase 1 OS=Arabidopsis thaliana GN=MIOX1 PE=2 SV=1 | 41 | 295 | 2.0E-88 |
| sp|Q9FJU4|MIOX5_ARATH | Inositol oxygenase 5 OS=Arabidopsis thaliana GN=MIOX5 PE=2 SV=1 | 42 | 295 | 7.0E-88 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q5Z8T3|MIOX_ORYSJ | Probable inositol oxygenase OS=Oryza sativa subsp. japonica GN=Os06g0561000 PE=2 SV=1 | 41 | 295 | 5.0E-93 |
| sp|Q54GH4|MIOX_DICDI | Inositol oxygenase OS=Dictyostelium discoideum GN=miox PE=3 SV=1 | 33 | 295 | 7.0E-93 |
| sp|O82200|MIOX2_ARATH | Inositol oxygenase 2 OS=Arabidopsis thaliana GN=MIOX2 PE=2 SV=2 | 41 | 295 | 3.0E-90 |
| sp|Q8L799|MIOX1_ARATH | Inositol oxygenase 1 OS=Arabidopsis thaliana GN=MIOX1 PE=2 SV=1 | 41 | 295 | 2.0E-88 |
| sp|Q9FJU4|MIOX5_ARATH | Inositol oxygenase 5 OS=Arabidopsis thaliana GN=MIOX5 PE=2 SV=1 | 42 | 295 | 7.0E-88 |
| sp|Q8H1S0|MIOX4_ARATH | Inositol oxygenase 4 OS=Arabidopsis thaliana GN=MIOX4 PE=2 SV=1 | 42 | 295 | 4.0E-86 |
| sp|Q4V8T0|MIOX_DANRE | Inositol oxygenase OS=Danio rerio GN=miox PE=2 SV=1 | 36 | 295 | 1.0E-80 |
| sp|Q5REY9|MIOX_PONAB | Inositol oxygenase OS=Pongo abelii GN=MIOX PE=2 SV=1 | 26 | 295 | 3.0E-74 |
| sp|Q9UGB7|MIOX_HUMAN | Inositol oxygenase OS=Homo sapiens GN=MIOX PE=1 SV=1 | 26 | 295 | 8.0E-74 |
| sp|Q9QXN5|MIOX_MOUSE | Inositol oxygenase OS=Mus musculus GN=Miox PE=1 SV=2 | 28 | 295 | 1.0E-73 |
| sp|Q9QXN4|MIOX_RAT | Inositol oxygenase OS=Rattus norvegicus GN=Miox PE=1 SV=2 | 26 | 295 | 5.0E-73 |
| sp|A7MBE4|MIOX_BOVIN | Inositol oxygenase OS=Bos taurus GN=MIOX PE=2 SV=1 | 28 | 295 | 8.0E-72 |
| sp|Q8WN98|MIOX_PIG | Inositol oxygenase OS=Sus scrofa GN=MIOX PE=1 SV=1 | 25 | 295 | 2.0E-70 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0019310 | inositol catabolic process | Yes |
| GO:0005737 | cytoplasm | Yes |
| GO:0050113 | inositol oxygenase activity | Yes |
| GO:0005506 | iron ion binding | Yes |
| GO:0044238 | primary metabolic process | No |
| GO:0006020 | inositol metabolic process | No |
| GO:0019751 | polyol metabolic process | No |
| GO:0009987 | cellular process | No |
| GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | No |
| GO:0043169 | cation binding | No |
| GO:0046872 | metal ion binding | No |
| GO:1901615 | organic hydroxy compound metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0005488 | binding | No |
| GO:0009056 | catabolic process | No |
| GO:0004497 | monooxygenase activity | No |
| GO:0008152 | metabolic process | No |
| GO:0003674 | molecular_function | No |
| GO:0044275 | cellular carbohydrate catabolic process | No |
| GO:0005575 | cellular_component | No |
| GO:0044282 | small molecule catabolic process | No |
| GO:0016052 | carbohydrate catabolic process | No |
| GO:0046164 | alcohol catabolic process | No |
| GO:0044281 | small molecule metabolic process | No |
| GO:0005975 | carbohydrate metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0046914 | transition metal ion binding | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0006066 | alcohol metabolic process | No |
| GO:0046174 | polyol catabolic process | No |
| GO:0043167 | ion binding | No |
| GO:0044237 | cellular metabolic process | No |
| GO:1901575 | organic substance catabolic process | No |
| GO:1901616 | organic hydroxy compound catabolic process | No |
| GO:0044262 | cellular carbohydrate metabolic process | No |
| GO:0003824 | catalytic activity | No |
| GO:0044248 | cellular catabolic process | No |
| GO:0016491 | oxidoreductase activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 16 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Agabi119p4|112950 MQPATFAQLEQTSDAVDEVNQLKGRLWNSEAEFAVEKDIISFRQYDDACDHVRAFYQEQHEKQTLEFNVEIRKRF AKLNHCEMGVWEAMELLNSMKDDSDPDTSVSQIEHLLQTAEAIRRDGKPEWMQVVGLVHDLGKLLTTFQPEGQWA IVGDTFPVGCKFSDKIIYSEKFYSNPDSRNHKLMTDCGIYEPHCGLDNVLLSWGHDEYLYLVLKNQSTLPKEGLW MIRYHSFYPWHREGAYQHLCNDADKDALAAVQAFNPYDLYSKSDDPVDPEKLKPYYIKLIAKFFPQKLRW* |
| Coding | >Agabi119p4|112950 ATGCAACCAGCAACATTCGCTCAGCTCGAACAAACGTCCGACGCCGTAGATGAAGTTAACCAATTAAAAGGACGT CTGTGGAATTCTGAAGCAGAGTTCGCCGTGGAGAAGGATATCATATCGTTTAGGCAGTATGACGACGCCTGCGAT CATGTTAGAGCATTTTATCAAGAACAGCATGAGAAACAAACGCTCGAGTTCAACGTCGAAATCCGCAAACGCTTC GCTAAACTCAACCATTGTGAGATGGGTGTTTGGGAAGCGATGGAACTTCTCAATTCAATGAAAGATGATTCAGAT CCTGACACAAGCGTGTCCCAAATTGAACACCTCTTACAAACCGCGGAAGCCATCCGCCGCGACGGAAAGCCCGAA TGGATGCAAGTCGTGGGTCTGGTGCATGATCTTGGCAAGCTCCTCACCACCTTCCAACCGGAAGGCCAATGGGCC ATCGTTGGAGACACATTCCCCGTTGGGTGCAAGTTTTCGGACAAGATAATCTACTCGGAGAAGTTTTATTCCAAT CCAGATTCTCGAAACCATAAACTCATGACGGACTGTGGGATCTACGAGCCCCACTGTGGACTTGATAATGTTCTC CTTTCATGGGGTCATGACGAATACCTGTATCTGGTACTAAAAAATCAATCCACGCTCCCAAAGGAGGGTCTTTGG ATGATACGGTATCACTCGTTCTACCCATGGCATCGCGAGGGCGCTTATCAACATCTATGCAATGACGCAGACAAG GATGCACTTGCTGCGGTTCAAGCGTTTAACCCTTACGATTTATACAGCAAGAGCGACGATCCGGTGGATCCAGAG AAGCTCAAGCCATACTACATCAAACTTATTGCTAAATTTTTTCCCCAGAAGCTTAGGTGGTGA |
| Transcript | >Agabi119p4|112950 ATGCAACCAGCAACATTCGCTCAGCTCGAACAAACGTCCGACGCCGTAGATGAAGTTAACCAATTAAAAGGACGT CTGTGGAATTCTGAAGCAGAGTTCGCCGTGGAGAAGGATATCATATCGTTTAGGCAGTATGACGACGCCTGCGAT CATGTTAGAGCATTTTATCAAGAACAGCATGAGAAACAAACGCTCGAGTTCAACGTCGAAATCCGCAAACGCTTC GCTAAACTCAACCATTGTGAGATGGGTGTTTGGGAAGCGATGGAACTTCTCAATTCAATGAAAGATGATTCAGAT CCTGACACAAGCGTGTCCCAAATTGAACACCTCTTACAAACCGCGGAAGCCATCCGCCGCGACGGAAAGCCCGAA TGGATGCAAGTCGTGGGTCTGGTGCATGATCTTGGCAAGCTCCTCACCACCTTCCAACCGGAAGGCCAATGGGCC ATCGTTGGAGACACATTCCCCGTTGGGTGCAAGTTTTCGGACAAGATAATCTACTCGGAGAAGTTTTATTCCAAT CCAGATTCTCGAAACCATAAACTCATGACGGACTGTGGGATCTACGAGCCCCACTGTGGACTTGATAATGTTCTC CTTTCATGGGGTCATGACGAATACCTGTATCTGGTACTAAAAAATCAATCCACGCTCCCAAAGGAGGGTCTTTGG ATGATACGGTATCACTCGTTCTACCCATGGCATCGCGAGGGCGCTTATCAACATCTATGCAATGACGCAGACAAG GATGCACTTGCTGCGGTTCAAGCGTTTAACCCTTACGATTTATACAGCAAGAGCGACGATCCGGTGGATCCAGAG AAGCTCAAGCCATACTACATCAAACTTATTGCTAAATTTTTTCCCCAGAAGCTTAGGTGGTGA |
| Gene | >Agabi119p4|112950 ATGCAACCAGCAACATTCGCTCAGCTCGAACAAACGTCCGACGCCGTAGATGAAGGTACTGCAATACAATAACTT TAGGTGCTGATCTGACCGTTGTTGTTTGAAGTTAACCAATTAAAAGGACGTCTGTGGAATTCTGAAGCAGAGTTC GCCGTGGAGAAGGATATCATATCGTTTAGGCAGTATGACGACGCCTGCGATCATGTTAGAGCATTTTATCAAGAA CAGCATGGTTAGCAAGTCGCTTCTTTACTACCAACGATCCTCAACATCGTCGTAGAGAAACAAACGCTCGAGTTC AACGTCGAAATCCGCAAACGCTTCGCTAAACTCAACCATTGTGAGATGGGTAAGTTCCTTCGTTTCCCTTCAAGG CACAGCTCATTGATCGCTCACGCACACTTACAGGTGTTTGGGAAGCGATGGAACTTCTCAATTCAATGAAAGATG ATTCAGATCCTGACGTGAGAAGTCCGTTTCGCCTGCTTGATTTAACAGTTGATGACCTGTCCGAGTAGACAAGCG TGTCCCAAATTGAACACCTCTTACAAACCGCGGAAGCCATCCGCCGCGACGGAAAGCCCGAATGGATGCAAGTCG TGGGTCTGGTGCATGATCTTGGCAAGCTCCTCACCACCTTCCAACCGGAGTAAAGTTCCTTCTTTGTGGAATATT TTTCTTGTCTGAAGCCGGTTTTTTTAGAGGCCAATGGGCCATCGTTGGAGTACGTATGACGAAATTTATTGCGTC AGGCTGATTGAAGAACCTTTGTCTTATAGGACACATTCCCCGTTGGGTGCAAGTTTTCGGACAAGATAATCTACT CGGAGAAGTTTTATTCCAATCCAGATTCTCGAAACCATAAACTCATGACGGACTGTGGGATCTACGAGCCCCACT GTGGACTTGATAATGTTCTCCTTTCATGGGGTCATGACGAAGTGAGTTCATATCCGTGGTGTCCGGTGTTCAATT TTCTGACACATACTCATGTAGTACCTGTATCTGGTACTAAAAAATCAATCCACGCTCCCAAAGGAGGGTCTTTGG ATGATACGGTATCACTCGTTCTACCCGTTTGTTCTTTTCAACCCCCATAATCTGGTATCCAATCCTGACGACTCC ATTTCCAGATGGCATCGCGAGGGCGCTTATCAACATCTATGCAATGACGCAGACAAGGATGCACTTGCTGCGGTT CAAGCGTTTAACCCTTACGATTTATACAGCAAGAGCGACGATCCGGTGGATCCAGAGAAGCTCAAGCCATACTAC ATCAAACTTATTGCTAAATTTTTTCCCCAGAAGCTTAGGTGGTGA |