Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|112340
Gene name
Locationscaffold_08:1560579..1561220
Strand+
Gene length (bp)641
Transcript length (bp)459
Coding sequence length (bp)459
Protein length (aa) 153

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10164 BRI3 Brain protein I3 4.8E-10 54 152

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 48 0.45

Transmembrane Domains

Domain # Start End Length
1 84 106 22
2 119 141 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|112340
MNDGGDALSYANTAEPLEQPQLIYIDQQTPGIEQQPLPGMGYQYTMSETGQPQMIMAQPRLTLQHSTMSMNTKVG
LGQQPIQPQATGVMMTGMTPGMMLVPNYLALCQQGHHAITTRYGPCGIITAVILFPIGLLALLVDVEKRCTRCGA
TF*
Coding >Agabi119p4|112340
ATGAATGACGGTGGAGACGCGTTATCATATGCCAATACGGCCGAACCACTGGAACAACCACAGTTGATCTACATA
GATCAACAAACTCCCGGCATAGAGCAACAACCGTTACCAGGAATGGGGTACCAATATACCATGTCGGAAACGGGC
CAGCCTCAGATGATAATGGCACAACCACGCTTAACTTTACAACACTCGACGATGTCGATGAATACGAAAGTTGGA
CTAGGTCAACAACCTATACAGCCCCAGGCGACAGGAGTCATGATGACGGGCATGACACCAGGAATGATGCTTGTG
CCGAATTATCTGGCACTTTGTCAACAAGGACACCACGCCATAACGACCAGATATGGCCCTTGCGGTATCATCACT
GCCGTCATTTTATTCCCTATCGGTCTTTTGGCTCTGCTCGTGGATGTCGAAAAGCGCTGTACTCGATGCGGTGCG
ACTTTTTGA
Transcript >Agabi119p4|112340
ATGAATGACGGTGGAGACGCGTTATCATATGCCAATACGGCCGAACCACTGGAACAACCACAGTTGATCTACATA
GATCAACAAACTCCCGGCATAGAGCAACAACCGTTACCAGGAATGGGGTACCAATATACCATGTCGGAAACGGGC
CAGCCTCAGATGATAATGGCACAACCACGCTTAACTTTACAACACTCGACGATGTCGATGAATACGAAAGTTGGA
CTAGGTCAACAACCTATACAGCCCCAGGCGACAGGAGTCATGATGACGGGCATGACACCAGGAATGATGCTTGTG
CCGAATTATCTGGCACTTTGTCAACAAGGACACCACGCCATAACGACCAGATATGGCCCTTGCGGTATCATCACT
GCCGTCATTTTATTCCCTATCGGTCTTTTGGCTCTGCTCGTGGATGTCGAAAAGCGCTGTACTCGATGCGGTGCG
ACTTTTTGA
Gene >Agabi119p4|112340
ATGAATGACGGTGGAGACGCGTTATCATATGCCAATACGGCCGAACCACTGGAACAACCACAGTTGATCTACATA
GATCAACAAACTCCCGGCATAGAGCAACAACCGTTACCAGGAATGGGGTACCAATATACCATGTCGGAAACGGGC
CAGCCTCAGATGATAATGGCACAACCACGCTTAACTTTACAACACTCGACGATGTCGATGAATACGAAAGTTGGA
CTAGGTCAACAACCTATACAGCCCCAGGCGACAGGAGTCATGATGACGGGCATGACACCAGGAATGATGCTTGTG
CCGAATTGTAAAGCTTTATTCCTATTCCGTTGATTAATTGAAGTATGTCGAACACTGATTGTCATTCTCTGATCC
CAACAGATCTGGCACTTTGTCAACAAGGACACCACGCCATAACGACCAGATATGGCCCTTGCGGTATCATCACTG
CCGTCGTACGTCTGTGTTATAGCCCTTCAAAAGTACTGCTATTGACTTGAAATAGATTTTATTCCCTATCGGTCT
TTTGGCTCTGCTGTAAGCCAAATTTAGATCCATACGAGCATAGGGGAGTATTCTGATCATCAAAAAATAGCGTGG
ATGTCGAAAAGCGCTGTACTCGATGCGGTGCGACTTTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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