Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|112230
Gene name
Locationscaffold_08:1517666..1518625
Strand+
Gene length (bp)959
Transcript length (bp)798
Coding sequence length (bp)798
Protein length (aa) 266

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 21 0.45

Transmembrane Domains

Domain # Start End Length
1 230 252 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|112230
MKISPIFFLILSVLLSITDAADVVNITVDDAGFDPLTNQYILYQPARAWKYSSNCSNCTAQLDETRAYMATWHDG
TFDPGLGTVVSSNTPDEVLYAEFNFTGVAVFVYCILSNSKEFPSGGSDMTFYVDGEQKGTFVRDADGSPGYIYDF
PVFVASSLPDGEHRLLIQSGRKGGKKVLTLLDRIVYTQNRKAEANITSTLHPTEAGKSRELKGHQPKPDKSSEVI
ARHLLQSLVVLCGLGYLLLIGFGWLFWRHRNRSNQNARQQ*
Coding >Agabi119p4|112230
ATGAAGATTAGCCCAATATTTTTCCTTATTCTCAGCGTGCTCTTATCCATCACCGATGCCGCAGACGTGGTCAAT
ATCACGGTCGACGATGCAGGTTTTGACCCCTTGACAAATCAATATATATTATACCAACCAGCCAGGGCTTGGAAG
TACAGCTCAAACTGCTCTAATTGCACTGCACAACTTGATGAAACTCGGGCATACATGGCAACTTGGCATGATGGG
ACGTTTGATCCTGGGCTGGGTACTGTTGTGAGTAGTAATACTCCAGATGAAGTGCTCTACGCTGAATTTAATTTC
ACCGGCGTCGCCGTATTTGTTTATTGTATCCTCTCGAATTCGAAAGAATTTCCGTCGGGCGGCAGTGACATGACG
TTCTATGTAGATGGTGAACAGAAGGGTACATTCGTTCGAGACGCAGACGGAAGCCCTGGGTATATCTATGATTTC
CCGGTCTTCGTGGCTTCATCGCTCCCGGATGGTGAGCATAGGCTTCTTATTCAAAGTGGACGTAAAGGTGGAAAG
AAGGTTTTAACACTACTCGACCGTATCGTCTACACACAAAATCGAAAGGCTGAGGCCAATATAACTTCAACTCTG
CATCCAACTGAGGCGGGAAAGAGCAGAGAACTCAAGGGCCACCAACCGAAGCCGGACAAGAGCTCAGAGGTAATA
GCACGACACTTATTGCAGTCATTGGTGGTACTTTGCGGACTGGGCTATTTACTCCTCATTGGCTTTGGGTGGTTG
TTTTGGCGACATCGGAATCGCAGCAATCAAAATGCACGGCAGCAGTGA
Transcript >Agabi119p4|112230
ATGAAGATTAGCCCAATATTTTTCCTTATTCTCAGCGTGCTCTTATCCATCACCGATGCCGCAGACGTGGTCAAT
ATCACGGTCGACGATGCAGGTTTTGACCCCTTGACAAATCAATATATATTATACCAACCAGCCAGGGCTTGGAAG
TACAGCTCAAACTGCTCTAATTGCACTGCACAACTTGATGAAACTCGGGCATACATGGCAACTTGGCATGATGGG
ACGTTTGATCCTGGGCTGGGTACTGTTGTGAGTAGTAATACTCCAGATGAAGTGCTCTACGCTGAATTTAATTTC
ACCGGCGTCGCCGTATTTGTTTATTGTATCCTCTCGAATTCGAAAGAATTTCCGTCGGGCGGCAGTGACATGACG
TTCTATGTAGATGGTGAACAGAAGGGTACATTCGTTCGAGACGCAGACGGAAGCCCTGGGTATATCTATGATTTC
CCGGTCTTCGTGGCTTCATCGCTCCCGGATGGTGAGCATAGGCTTCTTATTCAAAGTGGACGTAAAGGTGGAAAG
AAGGTTTTAACACTACTCGACCGTATCGTCTACACACAAAATCGAAAGGCTGAGGCCAATATAACTTCAACTCTG
CATCCAACTGAGGCGGGAAAGAGCAGAGAACTCAAGGGCCACCAACCGAAGCCGGACAAGAGCTCAGAGGTAATA
GCACGACACTTATTGCAGTCATTGGTGGTACTTTGCGGACTGGGCTATTTACTCCTCATTGGCTTTGGGTGGTTG
TTTTGGCGACATCGGAATCGCAGCAATCAAAATGCACGGCAGCAGTGA
Gene >Agabi119p4|112230
ATGAAGATTAGCCCAATATTTTTCCTTATTCTCAGCGTGCTCTTATCCATCACCGATGCCGCAGACGTGGTCAAT
ATCACGGTCGACGATGCAGGTTTTGACCCCTTGACAAATCAATATATATTATACCAACCAGCCAGGGCTTGGAAG
TACAGCTCAAACTGCTCTAATTGCACTGCACAACTTGATGAAACTCGGGCATACATGGCAACTTGGCATGATGGG
ACGGTATGTACCATTTTCTTCTTTCTTTCAAATTTTACTGAAATTGAACATCAGTTTGATCCTGGGCTGGGTACT
GTTGTGAGTAGTAATACTCCAGATGAAGTGCTCTACGCTGAATTTAATTTCACCGGTGAGAAACTAAATAATAAT
AATAATACCAATTGATTGACCTATGAAAAATAGGCGTCGCCGTATTTGTTTATTGTATCCTCTCGAATTCGAAAG
AATTTCCGTCGGGCGGCAGTGACATGACGTTCTATGTAGATGGTGAACAGAAGGGTACATTCGTTCGAGACGCAG
ACGGAAGCCCTGGGTATATCTATGATTTCCCGGTCTTCGTGGCTTCATCGCTCCCGGATGGTGAGCATAGGCTTC
TTATTCAAAGTGGACGTAAAGGTGGAAAGAAGGTTTTAACACTACTCGACCGTATCGTCTACACGTGAGTATCCA
AAAACCGGTCTTTTTCTTCCTGTTTCGGATTCTTACACTTGTATAGACAAAATCGAAAGGCTGAGGCCAATATAA
CTTCAACTCTGCATCCAACTGAGGCGGGAAAGAGCAGAGAACTCAAGGGCCACCAACCGAAGCCGGACAAGAGCT
CAGAGGTAATAGCACGACACTTATTGCAGTCATTGGTGGTACTTTGCGGACTGGGCTATTTACTCCTCATTGGCT
TTGGGTGGTTGTTTTGGCGACATCGGAATCGCAGCAATCAAAATGCACGGCAGCAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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