Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|112200
Gene name
Locationscaffold_08:1510731..1512195
Strand+
Gene length (bp)1464
Transcript length (bp)1140
Coding sequence length (bp)1140
Protein length (aa) 380

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF19086 Terpene_syn_C_2 Terpene synthase family 2, C-terminal metal binding 1.7E-43 82 281
PF03936 Terpene_synth_C Terpene synthase family, metal binding domain 6.9E-09 153 280

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|A8NE23|COP3_COPC7 Alpha-muurolene synthase OS=Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) GN=COP3 PE=1 SV=1 8 342 7.0E-160
sp|P0DL13|PRO1_ARMGA Delta(6)-protoilludene synthase OS=Armillaria gallica GN=PRO1 PE=1 SV=1 14 360 1.0E-35
sp|A8NU13|COP4_COPC7 Linoleate 10R-lipoxygenase COP4 OS=Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) GN=COP4 PE=1 SV=1 13 345 5.0E-35
sp|Q6WP50|BOT2_BOTFU Presilphiperfolan-8-beta-ol synthase OS=Botryotinia fuckeliana GN=BOT2 PE=1 SV=1 76 348 5.0E-20
sp|B2J4A4|GERAS_NOSP7 Germacrene A synthase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=Npun_R3832 PE=1 SV=1 16 325 7.0E-17
[Show all]
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Swissprot ID Swissprot Description Start End E-value
sp|A8NE23|COP3_COPC7 Alpha-muurolene synthase OS=Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) GN=COP3 PE=1 SV=1 8 342 7.0E-160
sp|P0DL13|PRO1_ARMGA Delta(6)-protoilludene synthase OS=Armillaria gallica GN=PRO1 PE=1 SV=1 14 360 1.0E-35
sp|A8NU13|COP4_COPC7 Linoleate 10R-lipoxygenase COP4 OS=Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) GN=COP4 PE=1 SV=1 13 345 5.0E-35
sp|Q6WP50|BOT2_BOTFU Presilphiperfolan-8-beta-ol synthase OS=Botryotinia fuckeliana GN=BOT2 PE=1 SV=1 76 348 5.0E-20
sp|B2J4A4|GERAS_NOSP7 Germacrene A synthase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=Npun_R3832 PE=1 SV=1 16 325 7.0E-17
sp|D8RLD3|MTS17_SELML (+)-germacrene D synthase OS=Selaginella moellendorffii GN=SELMODRAFT_412756 PE=1 SV=1 34 348 1.0E-11
sp|Q82IY4|PTLA_STRAW Pentalenene synthase OS=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680) GN=ptlA PE=1 SV=1 62 336 4.0E-11
sp|Q82RR7|TPC1_STRAW Avermitilol synthase OS=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680) GN=tpc1 PE=1 SV=1 137 327 8.0E-11
sp|B5GS26|DCADS_STRC2 (-)-delta-cadinene synthase OS=Streptomyces clavuligerus (strain ATCC 27064 / DSM 738 / JCM 4710 / NBRC 13307 / NCIMB 12785 / NRRL 3585 / VKM Ac-602) GN=SCreLAV_p0328 PE=1 SV=1 40 325 5.0E-10
sp|J9R1J8|MTS1_SELML Microbial Terpene synthase-like protein 1 OS=Selaginella moellendorffii GN=SELMODRAFT_402353 PE=1 SV=2 60 327 9.0E-09
sp|E3VWJ0|PNTA_STRAE Pentalenene synthase OS=Streptomyces arenae GN=pntA PE=3 SV=1 82 272 4.0E-08
sp|J9R393|MTS13_SELML Microbial Terpene synthase-like protein 13 OS=Selaginella moellendorffii GN=SELMODRAFT_412537 PE=2 SV=2 24 327 1.0E-07
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GO

GO Term Description Terminal node
GO:0010333 terpene synthase activity Yes
GO:0000287 magnesium ion binding Yes
GO:0016829 lyase activity Yes
GO:0016835 carbon-oxygen lyase activity No
GO:0043169 cation binding No
GO:0043167 ion binding No
GO:0046872 metal ion binding No
GO:0016838 carbon-oxygen lyase activity, acting on phosphates No
GO:0003824 catalytic activity No
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 22 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|112200
MSHAQLKQGPASFILPDPVQLNKLAYHPAGDDVAKQSAQWLDAGCPGLNSKQRRALYGLQVGELTAFCFNTVDTG
RLRIVSDFMNYLFHLDNISDGMMTRETDVLANAVMNAFRYPDSFTPTEDCPEELNPAKVARDFWSRCVKDCGPGA
QARFKETMGLFFAAVNIEAKARDSNKIPDLESYIKVNRDTSGCKPCWALIEYALGIDLPDFVAEDLVIQSLNEYA
IDLATTKVRLSGHFSYNVEQARGDTHNMIVILMKYHNHTLESAMDYVGKLCSETMNNFERRKSQVPSWAPEIDDM
VARYIQGLRNFTFGSLHWSFQTHHYFGDHGKVVKKQRLVHWLLPSETNTNIIQLLINRFNRSLSSMTPLLPFKID
HISF*
Coding >Agabi119p4|112200
ATGAGTCACGCTCAGCTTAAACAAGGGCCTGCTTCCTTCATCCTTCCCGACCCCGTTCAACTTAACAAGCTCGCT
TATCATCCCGCTGGAGACGATGTTGCAAAGCAGTCTGCCCAATGGCTGGATGCTGGTTGTCCTGGCCTCAATTCA
AAGCAACGACGTGCTTTGTATGGGCTTCAGGTTGGAGAACTCACTGCGTTCTGTTTTAACACTGTGGATACGGGG
CGGCTCCGCATTGTTTCTGATTTCATGAACTATCTATTCCACTTGGATAACATCAGCGATGGAATGATGACACGC
GAGACGGACGTTCTTGCAAATGCTGTTATGAATGCTTTCCGTTACCCCGATTCTTTTACTCCAACAGAAGATTGC
CCCGAGGAGCTCAACCCAGCAAAAGTTGCCAGAGATTTCTGGTCTCGCTGTGTCAAAGATTGCGGTCCGGGTGCC
CAGGCTCGATTCAAGGAGACGATGGGCTTGTTCTTTGCCGCGGTGAATATCGAAGCCAAAGCCCGTGATAGCAAC
AAGATACCAGATCTCGAATCTTACATTAAAGTTAACCGAGACACATCAGGCTGCAAACCCTGCTGGGCCCTGATT
GAATATGCTCTCGGAATTGATCTCCCTGACTTTGTCGCTGAGGACTTGGTTATCCAGTCCCTCAACGAGTACGCC
ATCGACCTGGCGACGACTAAAGTCAGACTTTCAGGACATTTCTCTTACAACGTCGAGCAAGCTCGCGGAGATACG
CACAATATGATTGTCATTCTAATGAAGTACCACAATCATACCCTCGAGAGTGCGATGGACTATGTTGGAAAATTG
TGTTCTGAAACTATGAATAACTTTGAGCGACGAAAGAGTCAGGTTCCTTCTTGGGCCCCCGAGATCGATGATATG
GTTGCGCGTTATATTCAAGGCCTCCGGAATTTCACCTTCGGGTCTCTTCACTGGAGTTTCCAGACTCATCATTAT
TTCGGTGATCATGGCAAGGTTGTTAAGAAACAAAGGCTTGTACACTGGCTTCTCCCTTCGGAAACCAACACCAAT
ATTATTCAACTGCTTATCAATCGCTTTAACCGTTCCCTATCCTCAATGACTCCCTTACTACCTTTCAAGATCGAC
CATATCAGTTTCTGA
Transcript >Agabi119p4|112200
ATGAGTCACGCTCAGCTTAAACAAGGGCCTGCTTCCTTCATCCTTCCCGACCCCGTTCAACTTAACAAGCTCGCT
TATCATCCCGCTGGAGACGATGTTGCAAAGCAGTCTGCCCAATGGCTGGATGCTGGTTGTCCTGGCCTCAATTCA
AAGCAACGACGTGCTTTGTATGGGCTTCAGGTTGGAGAACTCACTGCGTTCTGTTTTAACACTGTGGATACGGGG
CGGCTCCGCATTGTTTCTGATTTCATGAACTATCTATTCCACTTGGATAACATCAGCGATGGAATGATGACACGC
GAGACGGACGTTCTTGCAAATGCTGTTATGAATGCTTTCCGTTACCCCGATTCTTTTACTCCAACAGAAGATTGC
CCCGAGGAGCTCAACCCAGCAAAAGTTGCCAGAGATTTCTGGTCTCGCTGTGTCAAAGATTGCGGTCCGGGTGCC
CAGGCTCGATTCAAGGAGACGATGGGCTTGTTCTTTGCCGCGGTGAATATCGAAGCCAAAGCCCGTGATAGCAAC
AAGATACCAGATCTCGAATCTTACATTAAAGTTAACCGAGACACATCAGGCTGCAAACCCTGCTGGGCCCTGATT
GAATATGCTCTCGGAATTGATCTCCCTGACTTTGTCGCTGAGGACTTGGTTATCCAGTCCCTCAACGAGTACGCC
ATCGACCTGGCGACGACTAAAGTCAGACTTTCAGGACATTTCTCTTACAACGTCGAGCAAGCTCGCGGAGATACG
CACAATATGATTGTCATTCTAATGAAGTACCACAATCATACCCTCGAGAGTGCGATGGACTATGTTGGAAAATTG
TGTTCTGAAACTATGAATAACTTTGAGCGACGAAAGAGTCAGGTTCCTTCTTGGGCCCCCGAGATCGATGATATG
GTTGCGCGTTATATTCAAGGCCTCCGGAATTTCACCTTCGGGTCTCTTCACTGGAGTTTCCAGACTCATCATTAT
TTCGGTGATCATGGCAAGGTTGTTAAGAAACAAAGGCTTGTACACTGGCTTCTCCCTTCGGAAACCAACACCAAT
ATTATTCAACTGCTTATCAATCGCTTTAACCGTTCCCTATCCTCAATGACTCCCTTACTACCTTTCAAGATCGAC
CATATCAGTTTCTGA
Gene >Agabi119p4|112200
ATGAGTCACGCTCAGCTTAAACAAGGGCCTGCTTCCTTCATCCTTCCCGACCCCGTTCAACTTAACAAGCTCGCT
TATCATCCCGCTGGAGACGATGTTGCAAAGCAGTCTGCCCAATGGCTGGATGCTGGTTGTCCTGGCCTCAATTCA
AAGCAACGACGTGCTTTGTATGGGCTTCAGGTTGGAGAACTCACTGCGTTCTGTTTTAACACTGTGGATACGGGG
CGGCTCCGCATTGTTTCTGATTTCATGAACTATCTATTCCACTTGTGTGTCGTATGTTCTTTCTTTTTTATAATC
GAGTCTCATTATGCTATGTAGGGATAACATCAGCGATGGAATGATGACACGCGAGACGGACGTTCTTGCAAATGC
TGTTATGAATGCTTTCCGTTACCCCGATTCTTTTACTCCAACAGAAGATTGCCCCGAGGAGCTCAACCCAGCAAA
AGTTGCCAGAGAGTACGTCTTCCTTCACTGATCTCAAAAAATATTCTAATCACCTACTTTAATAGTTTCTGGTCT
CGCTGTGTCAAAGATTGCGGTCCGGGTGCCCAGGCTCGATTCAAGGAGACGATGGGCTTGTTCTTTGCCGCGGTG
AATATCGAAGCCAAAGCCCGTGATAGCAACAAGATACCAGATCTCGAATCTTACATTAAAGTTAACCGAGACACA
TCAGGCAAGTGATATGATAAGGTTCTTCACCTGTGAATAATTTCTTCCACTACTATGGTACAGGCTGCAAACCCT
GCTGGGCCCTGATTGAGTAAGTCTACGCCTCAGAAGAATCTATCATGATTTAATTTATGCGATCTTACTTCAGAT
ATGCTCTCGGAATTGATCTCCCTGACTTTGTCGCTGAGGACTTGGTTATCCAGTCCCTCAACGAGTACGCCATCG
ACCTGGTCACTTGGACTAATGTAAACCACGACTCTGTCACTGAGATAAGGCGACGACTAAAGTCAGACTTTCAGG
ACATTTCTCTTACAACGTCGAGCAAGCTCGCGGAGATACGCACAATATGATTGTCATTCTAATGAAGTACCACAA
TCATACCCTCGAGAGTGCGATGGACTATGTTGGAAAATTGTGTTCTGAAACTATGAATAACTTTGAGCGACGAAA
GAGTCAGGTTCCTTCTTGGGCCCCCGAGATCGATGATATGGTTGCGCGTTATATTCAAGGCCTCCGGAATTTCAC
CTTCGGGTATGTCAATACTTTGTGTGGTGATATGGTGACGCCAGTGTACTGATGTTTAGTTCTAGGTCTCTTCAC
TGGAGTTTCCAGACTCATCATTATTTCGGTGATCATGGCAAGGTTGTTAAGAAACAAAGGCTTGTACACTGGCTT
CTCCCTTCGGAAACCAACACCAATATTATTCAACTGCTTATCAATCGCTTTAACCGTTCCCTATCCTCAATGACT
CCCTTACTACCTTTCAAGATCGACCATATCAGTTTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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