Protein ID | Agabi119p4|111370 |
Gene name | |
Location | scaffold_08:1281931..1285125 |
Strand | + |
Gene length (bp) | 3194 |
Transcript length (bp) | 3135 |
Coding sequence length (bp) | 3135 |
Protein length (aa) | 1045 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF06428 | Sec2p | GDP/GTP exchange factor Sec2p | 1.5E-13 | 126 | 213 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|P17065|SEC2_YEAST | Rab guanine nucleotide exchange factor SEC2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEC2 PE=1 SV=1 | 54 | 322 | 3.0E-12 |
sp|O13930|SEC2_SCHPO | Rab guanine nucleotide exchange factor sec2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sec2 PE=1 SV=1 | 273 | 352 | 4.0E-08 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 27 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Agabi119p4|111370 MAEDILDTHDPSSDQNGPGNNLRNGKTNHYAADPEAQEMVIESLRGQIQDLFSQVTQLNSKLVKSYDRVSDLEDN LHVTSAQLRTSSVKVSQLELERTQHLAALNTGLLVEKHHVTTELNRLMEKATEEAAHRGQAESARAAIEKDLDDL SASLFNQANTMVAEARYAKHLSERKAVDAEQALKSAEEAVSAMQQQVQNLQEDKETAEQKVEEMQTLIGLGEDNW VATKNLEPLPPSLRLLGSHLPYQEFLSFVAHLRQLHVSSSNYPAMATLLSLPFLTRLSTEDSEPTLRLDLAPSLS WLSRRSVFAAIHTGQLTIEPVSFATLIAESPQLSNTGISAAHNENIPCALCGTPIFPQAPSANTGSTRPPSNPLI GMGHSYSGSIGSASSWSTNLFKKNPAHSTPPPAYSSFNPRTSQASSTPMYPSQVYIFRISSNQVSSNLPSLQLLK SSAPTTTVSGSPTPSSFAYTPPLSHGHSAGGTPTQSSSTIYPLCTSGWCLARLRSTCSLWAFVRTGIVEKIWEEE ISNITNPKQRPSSRRASVSHTQVAGASGAEKSSVPPKRRGLWGFASAIGASWSDSANDKDKARKPPSSSGTPEKE IDEKKEVKPRTLPPPPPRHPRELGSSTPPPLPKRSEGRVRTPVPSSTPEPIATPETTTQSTQLDESNISDANVST TVQNEKHAASPELSSPFPAVSGAPTSPISPNRTQRPMTPSTPPPPIPPRAAKRLSASVVRPGTPSSIPLPESRPD TPVIGSGVIPNPPSRTASPALGSSSATDAPPPIPKRAASRRRLTGEIDPRPESPVAPSSPATKHEGQAQSVAALT SSSQTQLDTVKEAVEEAKTENQDTETMEFTESPIAVKSVPSIASNTTTSGEEVFLDANDSSMAVEDEKEDKDKED KADKEKEDEVEREKEDEAEVKTLKEEKGTKERSDEDMKQEKSKDANQLHNDQPAISLNEEDLPVPTYHALPPSPP RLPPRRSEPVNGSRDIEKTKSLSSDNGSEVSEEGEAVYIGDSTWEEKTWKELTKLREGMYWARIGAVRV* |
Coding | >Agabi119p4|111370 ATGGCAGAAGATATTCTAGATACTCATGACCCGTCTTCAGATCAGAACGGTCCGGGGAACAATCTCCGCAATGGC AAGACCAATCATTACGCAGCCGATCCCGAAGCTCAGGAGATGGTCATTGAGTCTTTGCGAGGTCAAATTCAGGAC CTCTTCTCCCAAGTGACGCAACTTAATTCCAAACTTGTCAAGTCTTATGATCGTGTTTCTGACTTAGAGGACAAT CTCCATGTCACCTCTGCTCAGCTACGGACTTCATCCGTTAAAGTTTCTCAGCTTGAGCTCGAAAGGACACAGCAC CTTGCCGCTTTGAATACTGGGTTACTAGTCGAGAAGCACCATGTCACTACTGAGCTAAATCGGCTTATGGAAAAG GCAACGGAAGAGGCCGCGCATCGAGGACAAGCCGAGAGTGCTCGCGCCGCCATTGAAAAGGATCTTGATGACCTC AGTGCCTCCTTGTTCAACCAGGCGAACACCATGGTGGCCGAGGCACGCTATGCGAAGCACCTCAGTGAAAGGAAA GCTGTAGATGCCGAGCAGGCCCTCAAGAGCGCAGAGGAAGCCGTCAGCGCAATGCAGCAGCAGGTTCAAAATTTG CAGGAAGACAAAGAGACCGCAGAACAGAAGGTTGAAGAAATGCAGACCCTCATCGGCTTGGGTGAAGATAATTGG GTTGCCACAAAGAATCTCGAACCTCTCCCTCCTTCTCTTCGTCTTCTTGGTTCCCACCTTCCCTACCAAGAATTC CTTTCCTTTGTCGCTCATCTTCGACAGCTCCACGTGAGCTCTTCAAACTATCCAGCGATGGCTACCCTTCTTTCT CTGCCCTTTCTGACGCGGTTATCAACTGAAGACTCAGAACCCACCTTACGACTAGACCTCGCACCGTCGTTGAGC TGGTTATCCAGGCGTTCCGTTTTTGCTGCTATACATACTGGACAGCTCACCATTGAACCGGTGTCTTTCGCGACT TTGATTGCTGAATCGCCTCAGTTATCGAATACAGGAATTTCTGCTGCTCATAACGAGAATATTCCGTGTGCTCTT TGTGGGACACCCATCTTTCCTCAGGCCCCGTCGGCAAACACGGGTTCAACCCGACCTCCTTCTAATCCTCTCATA GGTATGGGGCACTCTTATTCCGGGTCTATCGGGTCTGCGTCTTCATGGTCCACCAACCTATTCAAGAAAAACCCC GCTCACTCAACCCCGCCTCCCGCCTACTCAAGTTTTAATCCTCGTACCAGTCAAGCTTCATCCACACCTATGTAT CCATCTCAAGTCTATATCTTCCGCATCTCATCAAATCAAGTATCGTCCAATCTACCCAGCCTACAATTGCTCAAA TCATCAGCCCCTACAACTACTGTGTCTGGTTCACCGACGCCCTCCTCATTTGCATATACTCCACCCTTGTCCCAC GGTCACTCGGCTGGAGGAACACCTACTCAATCAAGTAGCACGATATATCCGCTTTGCACGAGTGGCTGGTGTCTC GCCCGTCTTCGCTCTACATGTTCATTATGGGCCTTTGTCCGAACTGGCATTGTAGAGAAAATCTGGGAAGAGGAA ATTTCTAACATCACCAACCCTAAGCAAAGACCATCATCTAGAAGGGCATCCGTATCACATACTCAAGTTGCTGGC GCATCTGGTGCTGAAAAATCTTCTGTGCCTCCAAAGAGGAGGGGCTTGTGGGGCTTTGCTAGCGCTATCGGAGCG AGCTGGAGTGATAGCGCGAATGACAAGGATAAGGCGAGAAAACCACCCAGTTCTTCTGGGACACCAGAGAAGGAA ATTGACGAAAAGAAAGAAGTGAAACCGAGGACATTGCCTCCCCCACCACCTCGGCATCCCCGGGAGCTTGGAAGT AGTACGCCTCCCCCTCTCCCCAAGCGTAGCGAAGGCCGGGTTCGAACTCCAGTACCTTCCTCCACGCCAGAGCCC ATAGCCACTCCAGAGACAACAACTCAGTCTACCCAACTAGATGAAAGCAATATTTCCGATGCTAACGTGTCTACT ACGGTTCAGAATGAAAAGCACGCTGCCTCACCAGAACTTTCTTCTCCATTTCCAGCCGTCAGTGGCGCACCAACT TCCCCAATTTCCCCGAATCGAACACAGCGTCCCATGACTCCGTCGACACCACCACCACCAATTCCTCCTCGTGCC GCCAAAAGACTCTCGGCATCAGTCGTTCGACCTGGTACACCTTCTAGTATACCATTACCTGAGTCCCGTCCTGAT ACCCCTGTCATTGGTTCTGGTGTTATACCCAACCCTCCATCCCGCACTGCCTCGCCCGCACTTGGAAGTTCGTCT GCGACTGATGCTCCTCCACCTATTCCTAAACGTGCCGCTTCAAGAAGACGGCTTACCGGGGAAATCGATCCAAGG CCTGAATCGCCAGTGGCACCTAGCTCTCCTGCCACAAAGCATGAAGGTCAAGCTCAGAGTGTAGCTGCTTTGACA TCTTCATCTCAGACTCAATTGGATACCGTAAAAGAGGCTGTTGAGGAAGCTAAAACAGAGAATCAAGATACCGAG ACGATGGAGTTTACTGAATCGCCGATAGCGGTAAAATCGGTTCCCAGTATTGCCTCAAACACTACAACTTCCGGG GAGGAGGTTTTCTTGGATGCTAACGATAGTTCTATGGCAGTGGAGGATGAGAAAGAGGATAAGGACAAAGAAGAT AAAGCTGATAAGGAGAAAGAGGACGAAGTCGAGAGGGAGAAAGAGGATGAAGCTGAGGTCAAGACGTTGAAGGAG GAAAAGGGAACGAAGGAACGCTCAGACGAGGACATGAAGCAAGAGAAGTCGAAAGATGCAAATCAACTACACAAT GATCAACCTGCCATCTCGCTGAACGAAGAGGATCTACCTGTTCCTACCTATCATGCCTTACCACCCTCACCACCC CGTCTACCACCTCGTAGGTCTGAACCCGTGAATGGAAGTCGGGACATAGAGAAAACAAAGAGTCTTAGTAGTGAT AATGGCTCGGAGGTTAGTGAAGAGGGAGAAGCGGTATACATCGGTGATAGTACATGGGAGGAAAAGACGTGGAAA GAATTGACAAAACTCCGCGAAGGAATGTACTGGGCGAGGATTGGCGCTGTTCGAGTATAA |
Transcript | >Agabi119p4|111370 ATGGCAGAAGATATTCTAGATACTCATGACCCGTCTTCAGATCAGAACGGTCCGGGGAACAATCTCCGCAATGGC AAGACCAATCATTACGCAGCCGATCCCGAAGCTCAGGAGATGGTCATTGAGTCTTTGCGAGGTCAAATTCAGGAC CTCTTCTCCCAAGTGACGCAACTTAATTCCAAACTTGTCAAGTCTTATGATCGTGTTTCTGACTTAGAGGACAAT CTCCATGTCACCTCTGCTCAGCTACGGACTTCATCCGTTAAAGTTTCTCAGCTTGAGCTCGAAAGGACACAGCAC CTTGCCGCTTTGAATACTGGGTTACTAGTCGAGAAGCACCATGTCACTACTGAGCTAAATCGGCTTATGGAAAAG GCAACGGAAGAGGCCGCGCATCGAGGACAAGCCGAGAGTGCTCGCGCCGCCATTGAAAAGGATCTTGATGACCTC AGTGCCTCCTTGTTCAACCAGGCGAACACCATGGTGGCCGAGGCACGCTATGCGAAGCACCTCAGTGAAAGGAAA GCTGTAGATGCCGAGCAGGCCCTCAAGAGCGCAGAGGAAGCCGTCAGCGCAATGCAGCAGCAGGTTCAAAATTTG CAGGAAGACAAAGAGACCGCAGAACAGAAGGTTGAAGAAATGCAGACCCTCATCGGCTTGGGTGAAGATAATTGG GTTGCCACAAAGAATCTCGAACCTCTCCCTCCTTCTCTTCGTCTTCTTGGTTCCCACCTTCCCTACCAAGAATTC CTTTCCTTTGTCGCTCATCTTCGACAGCTCCACGTGAGCTCTTCAAACTATCCAGCGATGGCTACCCTTCTTTCT CTGCCCTTTCTGACGCGGTTATCAACTGAAGACTCAGAACCCACCTTACGACTAGACCTCGCACCGTCGTTGAGC TGGTTATCCAGGCGTTCCGTTTTTGCTGCTATACATACTGGACAGCTCACCATTGAACCGGTGTCTTTCGCGACT TTGATTGCTGAATCGCCTCAGTTATCGAATACAGGAATTTCTGCTGCTCATAACGAGAATATTCCGTGTGCTCTT TGTGGGACACCCATCTTTCCTCAGGCCCCGTCGGCAAACACGGGTTCAACCCGACCTCCTTCTAATCCTCTCATA GGTATGGGGCACTCTTATTCCGGGTCTATCGGGTCTGCGTCTTCATGGTCCACCAACCTATTCAAGAAAAACCCC GCTCACTCAACCCCGCCTCCCGCCTACTCAAGTTTTAATCCTCGTACCAGTCAAGCTTCATCCACACCTATGTAT CCATCTCAAGTCTATATCTTCCGCATCTCATCAAATCAAGTATCGTCCAATCTACCCAGCCTACAATTGCTCAAA TCATCAGCCCCTACAACTACTGTGTCTGGTTCACCGACGCCCTCCTCATTTGCATATACTCCACCCTTGTCCCAC GGTCACTCGGCTGGAGGAACACCTACTCAATCAAGTAGCACGATATATCCGCTTTGCACGAGTGGCTGGTGTCTC GCCCGTCTTCGCTCTACATGTTCATTATGGGCCTTTGTCCGAACTGGCATTGTAGAGAAAATCTGGGAAGAGGAA ATTTCTAACATCACCAACCCTAAGCAAAGACCATCATCTAGAAGGGCATCCGTATCACATACTCAAGTTGCTGGC GCATCTGGTGCTGAAAAATCTTCTGTGCCTCCAAAGAGGAGGGGCTTGTGGGGCTTTGCTAGCGCTATCGGAGCG AGCTGGAGTGATAGCGCGAATGACAAGGATAAGGCGAGAAAACCACCCAGTTCTTCTGGGACACCAGAGAAGGAA ATTGACGAAAAGAAAGAAGTGAAACCGAGGACATTGCCTCCCCCACCACCTCGGCATCCCCGGGAGCTTGGAAGT AGTACGCCTCCCCCTCTCCCCAAGCGTAGCGAAGGCCGGGTTCGAACTCCAGTACCTTCCTCCACGCCAGAGCCC ATAGCCACTCCAGAGACAACAACTCAGTCTACCCAACTAGATGAAAGCAATATTTCCGATGCTAACGTGTCTACT ACGGTTCAGAATGAAAAGCACGCTGCCTCACCAGAACTTTCTTCTCCATTTCCAGCCGTCAGTGGCGCACCAACT TCCCCAATTTCCCCGAATCGAACACAGCGTCCCATGACTCCGTCGACACCACCACCACCAATTCCTCCTCGTGCC GCCAAAAGACTCTCGGCATCAGTCGTTCGACCTGGTACACCTTCTAGTATACCATTACCTGAGTCCCGTCCTGAT ACCCCTGTCATTGGTTCTGGTGTTATACCCAACCCTCCATCCCGCACTGCCTCGCCCGCACTTGGAAGTTCGTCT GCGACTGATGCTCCTCCACCTATTCCTAAACGTGCCGCTTCAAGAAGACGGCTTACCGGGGAAATCGATCCAAGG CCTGAATCGCCAGTGGCACCTAGCTCTCCTGCCACAAAGCATGAAGGTCAAGCTCAGAGTGTAGCTGCTTTGACA TCTTCATCTCAGACTCAATTGGATACCGTAAAAGAGGCTGTTGAGGAAGCTAAAACAGAGAATCAAGATACCGAG ACGATGGAGTTTACTGAATCGCCGATAGCGGTAAAATCGGTTCCCAGTATTGCCTCAAACACTACAACTTCCGGG GAGGAGGTTTTCTTGGATGCTAACGATAGTTCTATGGCAGTGGAGGATGAGAAAGAGGATAAGGACAAAGAAGAT AAAGCTGATAAGGAGAAAGAGGACGAAGTCGAGAGGGAGAAAGAGGATGAAGCTGAGGTCAAGACGTTGAAGGAG GAAAAGGGAACGAAGGAACGCTCAGACGAGGACATGAAGCAAGAGAAGTCGAAAGATGCAAATCAACTACACAAT GATCAACCTGCCATCTCGCTGAACGAAGAGGATCTACCTGTTCCTACCTATCATGCCTTACCACCCTCACCACCC CGTCTACCACCTCGTAGGTCTGAACCCGTGAATGGAAGTCGGGACATAGAGAAAACAAAGAGTCTTAGTAGTGAT AATGGCTCGGAGGTTAGTGAAGAGGGAGAAGCGGTATACATCGGTGATAGTACATGGGAGGAAAAGACGTGGAAA GAATTGACAAAACTCCGCGAAGGAATGTACTGGGCGAGGATTGGCGCTGTTCGAGTATAA |
Gene | >Agabi119p4|111370 ATGGCAGAAGATATTCTAGATACTCATGACCCGTCTTCAGATCAGAACGGTCCGGGGAACAATCTCCGCAATGGC AAGACCAATCATTACGCAGCCGATCCCGAAGCTCAGGAGATGGTCATTGAGTCTTTGCGAGGTCAAATTCAGGAC CTCTTCTCCCAAGTGACGCAACTTAATTCCAAACTTGTCAAGTCTTATGATCGTGTTTCTGACTTAGAGGACAAT CTCCATGTCACCTCTGCTCAGCTACGGACTTCATCCGTTAAAGTTTCTCAGCTTGAGCTCGAAAGGACACAGCAC CTTGCCGCTTTGAATACTGGGTTACTAGTCGAGAAGCACCATGTCACTACTGAGCTAAATCGGCTTATGGAAAAG GCAACGGAAGAGGCCGCGCATCGAGGACAAGCCGAGAGTGCTCGCGCCGCCATTGAAAAGGATCTTGATGACCTC AGTGCCTCCTTGTTCAACCAGGCGAACACCATGGTGGCCGAGGCACGCTATGCGAAGCACCTCAGTGAAAGGAAA GCTGTAGATGCCGAGCAGGCCCTCAAGAGCGCAGAGGAAGCCGTCAGCGCAATGCAGCAGCAGGTTCAAAATTTG CAGGAAGACAAAGAGACCGCAGAACAGAAGGTTGAAGAAATGCAGACCCTCATCGGCTTGGGTGAAGATAATTGG GTTGCCACAAAGAATCTCGAACCTCTCCCTCCTTCTCTTCGTCTTCTTGGTTCCCACCTTCCCTACCAAGAATTC CTTTCCTTTGTCGCTCATCTTCGACAGCTCCACGTGAGCTCTTCAAACTATCCAGCGATGGCTACCCTTCTTTCT CTGCCCTTTCTGACGCGGTTATCAACTGAAGACTCGTGAGCCATGAATCTTGTCGTTTTCATGATTCGGTCGCTG ATGCTTATGTTCTTTTTAGAGAACCCACCTTACGACTAGACCTCGCACCGTCGTTGAGCTGGTTATCCAGGCGTT CCGTTTTTGCTGCTATACATACTGGACAGCTCACCATTGAACCGGTGTCTTTCGCGACTTTGATTGCTGAATCGC CTCAGTTATCGAATACAGGAATTTCTGCTGCTCATAACGAGAATATTCCGTGTGCTCTTTGTGGGACACCCATCT TTCCTCAGGCCCCGTCGGCAAACACGGGTTCAACCCGACCTCCTTCTAATCCTCTCATAGGTATGGGGCACTCTT ATTCCGGGTCTATCGGGTCTGCGTCTTCATGGTCCACCAACCTATTCAAGAAAAACCCCGCTCACTCAACCCCGC CTCCCGCCTACTCAAGTTTTAATCCTCGTACCAGTCAAGCTTCATCCACACCTATGTATCCATCTCAAGTCTATA TCTTCCGCATCTCATCAAATCAAGTATCGTCCAATCTACCCAGCCTACAATTGCTCAAATCATCAGCCCCTACAA CTACTGTGTCTGGTTCACCGACGCCCTCCTCATTTGCATATACTCCACCCTTGTCCCACGGTCACTCGGCTGGAG GAACACCTACTCAATCAAGTAGCACGATATATCCGCTTTGCACGAGTGGCTGGTGTCTCGCCCGTCTTCGCTCTA CATGTTCATTATGGGCCTTTGTCCGAACTGGCATTGTAGAGAAAATCTGGGAAGAGGAAATTTCTAACATCACCA ACCCTAAGCAAAGACCATCATCTAGAAGGGCATCCGTATCACATACTCAAGTTGCTGGCGCATCTGGTGCTGAAA AATCTTCTGTGCCTCCAAAGAGGAGGGGCTTGTGGGGCTTTGCTAGCGCTATCGGAGCGAGCTGGAGTGATAGCG CGAATGACAAGGATAAGGCGAGAAAACCACCCAGTTCTTCTGGGACACCAGAGAAGGAAATTGACGAAAAGAAAG AAGTGAAACCGAGGACATTGCCTCCCCCACCACCTCGGCATCCCCGGGAGCTTGGAAGTAGTACGCCTCCCCCTC TCCCCAAGCGTAGCGAAGGCCGGGTTCGAACTCCAGTACCTTCCTCCACGCCAGAGCCCATAGCCACTCCAGAGA CAACAACTCAGTCTACCCAACTAGATGAAAGCAATATTTCCGATGCTAACGTGTCTACTACGGTTCAGAATGAAA AGCACGCTGCCTCACCAGAACTTTCTTCTCCATTTCCAGCCGTCAGTGGCGCACCAACTTCCCCAATTTCCCCGA ATCGAACACAGCGTCCCATGACTCCGTCGACACCACCACCACCAATTCCTCCTCGTGCCGCCAAAAGACTCTCGG CATCAGTCGTTCGACCTGGTACACCTTCTAGTATACCATTACCTGAGTCCCGTCCTGATACCCCTGTCATTGGTT CTGGTGTTATACCCAACCCTCCATCCCGCACTGCCTCGCCCGCACTTGGAAGTTCGTCTGCGACTGATGCTCCTC CACCTATTCCTAAACGTGCCGCTTCAAGAAGACGGCTTACCGGGGAAATCGATCCAAGGCCTGAATCGCCAGTGG CACCTAGCTCTCCTGCCACAAAGCATGAAGGTCAAGCTCAGAGTGTAGCTGCTTTGACATCTTCATCTCAGACTC AATTGGATACCGTAAAAGAGGCTGTTGAGGAAGCTAAAACAGAGAATCAAGATACCGAGACGATGGAGTTTACTG AATCGCCGATAGCGGTAAAATCGGTTCCCAGTATTGCCTCAAACACTACAACTTCCGGGGAGGAGGTTTTCTTGG ATGCTAACGATAGTTCTATGGCAGTGGAGGATGAGAAAGAGGATAAGGACAAAGAAGATAAAGCTGATAAGGAGA AAGAGGACGAAGTCGAGAGGGAGAAAGAGGATGAAGCTGAGGTCAAGACGTTGAAGGAGGAAAAGGGAACGAAGG AACGCTCAGACGAGGACATGAAGCAAGAGAAGTCGAAAGATGCAAATCAACTACACAATGATCAACCTGCCATCT CGCTGAACGAAGAGGATCTACCTGTTCCTACCTATCATGCCTTACCACCCTCACCACCCCGTCTACCACCTCGTA GGTCTGAACCCGTGAATGGAAGTCGGGACATAGAGAAAACAAAGAGTCTTAGTAGTGATAATGGCTCGGAGGTTA GTGAAGAGGGAGAAGCGGTATACATCGGTGATAGTACATGGGAGGAAAAGACGTGGAAAGAATTGACAAAACTCC GCGAAGGAATGTACTGGGCGAGGATTGGCGCTGTTCGAGTATAA |