Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|111340
Gene name
Locationscaffold_08:1272297..1275008
Strand+
Gene length (bp)2711
Transcript length (bp)1701
Coding sequence length (bp)1701
Protein length (aa) 567

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03935 SKN1_KRE6_Sbg1 Beta-glucan synthesis-associated protein SKN1/KRE6/Sbg1 1.8E-191 40 562

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P32486|KRE6_YEAST Beta-glucan synthesis-associated protein KRE6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=KRE6 PE=1 SV=2 38 566 3.0E-129
sp|P87024|SKN1_CANAX Beta-glucan synthesis-associated protein SKN1 OS=Candida albicans GN=SKN1 PE=2 SV=1 38 565 2.0E-128
sp|P87023|KRE6_CANAX Beta-glucan synthesis-associated protein KRE6 OS=Candida albicans GN=KRE6 PE=2 SV=1 38 565 4.0E-124
sp|P33336|SKN1_YEAST Beta-glucan synthesis-associated protein SKN1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SKN1 PE=1 SV=1 33 566 7.0E-120
sp|O13941|YEPB_SCHPO Uncharacterized beta-glucan synthesis-associated protein C23H3.11c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC23H3.11c PE=3 SV=1 46 560 5.0E-118
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[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|P32486|KRE6_YEAST Beta-glucan synthesis-associated protein KRE6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=KRE6 PE=1 SV=2 38 566 3.0E-129
sp|P87024|SKN1_CANAX Beta-glucan synthesis-associated protein SKN1 OS=Candida albicans GN=SKN1 PE=2 SV=1 38 565 2.0E-128
sp|P87023|KRE6_CANAX Beta-glucan synthesis-associated protein KRE6 OS=Candida albicans GN=KRE6 PE=2 SV=1 38 565 4.0E-124
sp|P33336|SKN1_YEAST Beta-glucan synthesis-associated protein SKN1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SKN1 PE=1 SV=1 33 566 7.0E-120
sp|O13941|YEPB_SCHPO Uncharacterized beta-glucan synthesis-associated protein C23H3.11c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC23H3.11c PE=3 SV=1 46 560 5.0E-118
sp|O13789|YEOB_SCHPO Uncharacterized beta-glucan synthesis-associated protein C17G6.11c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC17G6.11c PE=3 SV=1 31 565 3.0E-104
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

Domain # Start End Length
1 77 99 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|111340
MRANSLRSNGVGNASSLSLPLSVSEKYSLPPSPATWGMPLRMDDPESDDFLHNPDPRRDRKCDQGGTIFTGRGLA
NLGCLFILSLGILTLFAGFPIISFATKTVQTNQGGFNLGGTNATGQVPDMPGSFGLIDKDTPQDAYTRKSYINDE
EYVLVFSDEFNVDGRTFFPGDDPYWEAVDLHYWGTNDLEWYDPGQPTTANGSLRLTLEEADPANNHELNYKSGMI
QSWNKFCFTGGIVETKVQLPGSNVVAGLWPAVWSMGNLGRAGFGASLEGTWPYSYDACDVGTLPNQTFPGTRTPL
AAVQGGDPANNDELSFQPGQRLSACTCPGESHPGPVRSDGTYVGRAAPEIDVFEATVIQGVKGQLSMSGQWAPYN
AQYTWHNTSDNFEIYDPDITELNAYVGGVYQQTTSALTDANQDCYELAAGCFAIYAFEYKPGFDNGYITWVNDDK
PTWTIYSGGLSADPLVNISARPIPMEPMYIIANLGFSHNFGAIDFDLLTFPTTMSVDYIRVYQPKNAINIGCDPV
GFPTSNYINTYLEAYTNFNLTTWESFKQPWPKNKMSATGCS*
Coding >Agabi119p4|111340
ATGAGAGCGAATTCACTTCGATCCAACGGCGTAGGCAACGCGAGTTCCCTGAGTCTACCGCTATCCGTATCTGAA
AAATATTCCCTACCACCTTCTCCCGCAACATGGGGAATGCCCCTGCGCATGGATGACCCAGAATCTGACGACTTC
CTCCACAATCCTGATCCGCGTCGTGATAGAAAATGCGACCAAGGAGGCACCATTTTCACTGGCCGTGGACTAGCC
AACTTGGGATGTCTATTTATTCTTTCCTTGGGTATTTTGACGCTCTTTGCTGGCTTTCCAATCATATCATTTGCG
ACGAAAACTGTACAAACCAATCAGGGCGGATTCAATCTTGGCGGAACAAATGCGACTGGCCAAGTTCCCGATATG
CCTGGAAGTTTCGGCCTCATCGACAAGGATACACCGCAGGACGCATATACGAGAAAATCTTACATAAACGACGAA
GAATATGTGTTGGTGTTTTCAGACGAATTTAACGTTGACGGCCGGACGTTTTTCCCTGGAGATGATCCTTACTGG
GAGGCGGTGGATTTGCACTATTGGGGGACAAATGACTTGGAATGGTATGATCCTGGTCAACCCACGACTGCCAAT
GGTTCTCTTCGCCTGACGCTCGAGGAAGCTGATCCGGCTAATAACCATGAACTCAATTACAAATCGGGCATGATA
CAGTCCTGGAACAAATTCTGTTTCACGGGTGGTATTGTCGAGACGAAAGTCCAACTACCTGGTTCAAATGTAGTC
GCTGGACTCTGGCCCGCCGTTTGGTCAATGGGAAATCTTGGTCGAGCCGGGTTCGGTGCATCCCTGGAAGGCACA
TGGCCCTACTCTTATGATGCTTGTGATGTCGGCACCCTACCCAACCAGACATTTCCAGGAACTCGAACACCACTG
GCAGCAGTGCAAGGTGGAGACCCGGCGAACAACGATGAACTATCATTCCAACCCGGGCAAAGATTATCTGCTTGT
ACATGTCCCGGAGAATCTCATCCCGGACCCGTACGAAGTGATGGGACTTACGTCGGTCGTGCAGCTCCTGAAATA
GATGTGTTTGAAGCAACTGTGATCCAAGGCGTCAAAGGTCAATTATCCATGTCTGGCCAGTGGGCACCCTATAAT
GCGCAATATACGTGGCACAATACCTCCGACAATTTCGAAATTTATGACCCAGACATTACCGAGCTAAACGCTTAT
GTTGGAGGTGTTTATCAGCAAACAACCAGTGCTCTTACCGACGCGAATCAAGACTGCTATGAGCTGGCTGCAGGG
TGTTTCGCGATCTATGCTTTTGAATACAAGCCCGGATTTGATAATGGTTATATCACCTGGGTCAACGATGATAAA
CCGACCTGGACTATATACTCTGGTGGTCTGTCCGCGGATCCTCTTGTTAATATTAGTGCTCGTCCTATACCAATG
GAACCTATGTACATCATCGCCAACCTTGGTTTCTCACATAACTTTGGAGCAATCGACTTCGACCTTCTTACCTTC
CCCACAACAATGAGTGTCGATTATATTCGGGTGTATCAGCCTAAAAATGCGATCAACATAGGATGTGACCCTGTT
GGTTTTCCCACATCCAATTATATCAATACTTACCTCGAGGCTTATACTAACTTCAACCTTACAACTTGGGAAAGT
TTCAAGCAGCCTTGGCCCAAGAATAAAATGTCCGCTACTGGTTGTTCATGA
Transcript >Agabi119p4|111340
ATGAGAGCGAATTCACTTCGATCCAACGGCGTAGGCAACGCGAGTTCCCTGAGTCTACCGCTATCCGTATCTGAA
AAATATTCCCTACCACCTTCTCCCGCAACATGGGGAATGCCCCTGCGCATGGATGACCCAGAATCTGACGACTTC
CTCCACAATCCTGATCCGCGTCGTGATAGAAAATGCGACCAAGGAGGCACCATTTTCACTGGCCGTGGACTAGCC
AACTTGGGATGTCTATTTATTCTTTCCTTGGGTATTTTGACGCTCTTTGCTGGCTTTCCAATCATATCATTTGCG
ACGAAAACTGTACAAACCAATCAGGGCGGATTCAATCTTGGCGGAACAAATGCGACTGGCCAAGTTCCCGATATG
CCTGGAAGTTTCGGCCTCATCGACAAGGATACACCGCAGGACGCATATACGAGAAAATCTTACATAAACGACGAA
GAATATGTGTTGGTGTTTTCAGACGAATTTAACGTTGACGGCCGGACGTTTTTCCCTGGAGATGATCCTTACTGG
GAGGCGGTGGATTTGCACTATTGGGGGACAAATGACTTGGAATGGTATGATCCTGGTCAACCCACGACTGCCAAT
GGTTCTCTTCGCCTGACGCTCGAGGAAGCTGATCCGGCTAATAACCATGAACTCAATTACAAATCGGGCATGATA
CAGTCCTGGAACAAATTCTGTTTCACGGGTGGTATTGTCGAGACGAAAGTCCAACTACCTGGTTCAAATGTAGTC
GCTGGACTCTGGCCCGCCGTTTGGTCAATGGGAAATCTTGGTCGAGCCGGGTTCGGTGCATCCCTGGAAGGCACA
TGGCCCTACTCTTATGATGCTTGTGATGTCGGCACCCTACCCAACCAGACATTTCCAGGAACTCGAACACCACTG
GCAGCAGTGCAAGGTGGAGACCCGGCGAACAACGATGAACTATCATTCCAACCCGGGCAAAGATTATCTGCTTGT
ACATGTCCCGGAGAATCTCATCCCGGACCCGTACGAAGTGATGGGACTTACGTCGGTCGTGCAGCTCCTGAAATA
GATGTGTTTGAAGCAACTGTGATCCAAGGCGTCAAAGGTCAATTATCCATGTCTGGCCAGTGGGCACCCTATAAT
GCGCAATATACGTGGCACAATACCTCCGACAATTTCGAAATTTATGACCCAGACATTACCGAGCTAAACGCTTAT
GTTGGAGGTGTTTATCAGCAAACAACCAGTGCTCTTACCGACGCGAATCAAGACTGCTATGAGCTGGCTGCAGGG
TGTTTCGCGATCTATGCTTTTGAATACAAGCCCGGATTTGATAATGGTTATATCACCTGGGTCAACGATGATAAA
CCGACCTGGACTATATACTCTGGTGGTCTGTCCGCGGATCCTCTTGTTAATATTAGTGCTCGTCCTATACCAATG
GAACCTATGTACATCATCGCCAACCTTGGTTTCTCACATAACTTTGGAGCAATCGACTTCGACCTTCTTACCTTC
CCCACAACAATGAGTGTCGATTATATTCGGGTGTATCAGCCTAAAAATGCGATCAACATAGGATGTGACCCTGTT
GGTTTTCCCACATCCAATTATATCAATACTTACCTCGAGGCTTATACTAACTTCAACCTTACAACTTGGGAAAGT
TTCAAGCAGCCTTGGCCCAAGAATAAAATGTCCGCTACTGGTTGTTCATGA
Gene >Agabi119p4|111340
ATGAGAGCGAATTCACTTCGATCCAACGGCGTAGGCAACGCGAGTTCCCTGAGTCTACCGGTGAGCGCAGGCTCT
TTGTTCATTGGTATTTGAGAGGTTGATCTTTTGACTAGCTATCCGTATCTGAAAAAGCATGTGCCTTGTTTTTGC
TTCAACGTGATCGATCACTAAGTGATAGCCTCTAGTATTCCCTACCACCTTCTCCCGCAACATGGGGAATGCCCC
TGCGCATGGATGACCCAGAATCTGACGACTTCCTCCACAATCCTGATCCGCGTCGTGATAGAAAATGCGACCAAG
GAGGCACCATTTTCACTGGCCGTGGACTAGCCAACTTGGGATGTCTATTTATTCTTTCCTTGGGTATTTTGACGC
TCTTGTGAGTGTTCGATCATTAATTTAGCCGTAACAAATCTCATGAATGCCCTGCAATTAGTGCTGGTATGCCGT
TTTGAGTAGTGATTTAGACCTTCTGATCCACCAAAAAAAAAAAATAGGCTTTCCAATCATATCATTTGCGACGAA
AACTGTACAAACCAATCAGGGCGGATTCAATCTTGGCGGAACAAATGCGACTGGCCAAGTTCCCGATATGCCTGG
AAGTTTCGGCCTCATCGACAAGGATACACCGCAGGACGCATATACGAGAAAATCTTACATAAACGACGAAGAATA
TGTGTTGGTGTTTTCAGACGAATTTAACGTTGACGGCCGGACGTTTTTCCCTGGAGATGATCCTTACTGGGAGGC
GGTGGATTTGCACTATTGGGGGACAGTACGTGGCCTGTATATTGAAGATGTTGAGTATTTACCCCTGCCTTCTTC
TGTCTAGAATGACTTGGAATGGTATGATCCTGGTCAACGTATGTCTCTTTGGTTGCAGCACTTTACTCTTTGCTC
AAATTTGTGCAGCCACGACTGCCAATGGTTCTCTTCGCCTGACGCTCGAGGAAGCTGATCCGGCTAATAACCATG
AACTCAATTACAAATCGGGCATGGTGAGCCGACTTTTCTCTCTCTCGGTGTTACTTCACTGACTAAAATTCCAAC
GCGCAGATACAGTCCTGGTACGGTACCTTTCGAAAGGCCCCGCTAGCAATACTAACAAGCGTCTTAGGAACAAAT
TCTGTTTCACGGGTGGTATTGTCGAGAGTACGAGGCATCCCCTTATGACATAAATTCACGTGGCTGACTCACTGG
TTTTCAGCGAAAGTCCAACTACCTGGTTCAAATGTAGTCGCGTGAGTTGTAGTTCGAAATTCATTTTGTTGGAGG
ATAACATCAGGACAGTGGACTCTGGCCCGCCGTTTGGTCAATGGGAAATCTTGGTCGAGCCGGGTTCGGTGCATC
CCTGGAAGGCACAGTGCGTGCTAGCTGAAAAAAAAATTATATTGCTGCTAGATTTGACACTTTCATAGTGGCCCT
ACTCTTATGATGCTTGTGATGTCGGCACCCTACCCAACCAGACATTTCCAGGAACTCGAACACCACTGGCAGCAG
TGCAAGGTGGAGACCCGGCGAACAACGATGAACTAGTAGGTTCTTTTACCCGCTGAGCACTAAGTTTGTCTAACG
GACGTTACCTACCAAGTCATTCCAACCCGGGCAAAGATTATGTATGAACAGTTTACTGAATCGTGTGCTTCCGCT
TACTCCATCGTGCAGCTGCTTGTACATGTCCCGGAGAATCTCATCCCGGACCCGTACGAAGTGATGGGACTTACG
TCGGTCGTGCAGCTCCTGAAATAGATGTGTTTGAAGCAACTGTGATCCAAGGCGTCAAAGGTCAAGTAAGTTGCC
TCAGTCTGATATACTCATTCTCGCTCACAAGTCTTAGTTATCCATGTCTGGCCAGTGGGCACCCTATAATGTAAG
TAAGATTTACGCTAACTTAGTGCTCTGACCAATGTATATTCCAGGCGCAATATACGTGGCACAATACCTCCGACA
ATTTCGAAATTTATGACCCAGACATTACCGAGCTAAACGCTTATGTTGGAGGTCAGTACTATAGATCCATTTTCA
CTCCCTTTCTCCTAATTTTTTCAAAAGGTGTTTATCAGCAAACAACCAGTGCTCTTACCGACGCGAATCAAGACT
GCTATGAGCTGGCTGCAGGGTGTTTCGCGATCTATGCTTTTGAATACAAGCCCGGGTAAGGCACTTTCATCGTAT
TTTGTTTGCAGCAAAACCTCACTTTTTTTCCAAAGATTTGATAATGGTTATATCACCTGGGTCAACGATGATAAA
CCGACCTGGACTATATACTCTGGTGGTCTGTCCGCGGATCCTCTTGTTAATATTAGTGCTCGTCCTATACCAATG
GAACCTATGGCATGTCCTCTTCTGATTTTTATGCATGTTTCTTACTAAATAACTTGTCATGACTTTTTGCAGTAC
ATCATCGCCAACCTTGGTTTCTCACATAACTTTGGAGCAATCGACTTCGACCTTCTTACCTTCCCCACAACAATG
AGTGTCGATTATATTCGGGTGTATCAGCCTAAAAATGCGATCAACATAGGATGTGACCCTGTTGGTTTTCCCACA
TCCAATTATATCAATACGTTGGTGTATTTCTTCTTCGTTCCGAATCTAGGCTGATAATTGACAGTTACCTCGAGG
CTTATACTAACTTCAACCTTACAACTTGGGAAAGTTTCAAGCAGCCTTGGCCCAAGAATAAAATGTCCGCTACTG
GTTGTTCATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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