© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Agabi119p4|110030 |
| Gene name | |
| Location | scaffold_08:906500..908300 |
| Strand | - |
| Gene length (bp) | 1800 |
| Transcript length (bp) | 1482 |
| Coding sequence length (bp) | 1482 |
| Protein length (aa) | 494 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF10510 | PIG-S | Phosphatidylinositol-glycan biosynthesis class S protein | 2.4E-08 | 26 | 70 |
| PF10510 | PIG-S | Phosphatidylinositol-glycan biosynthesis class S protein | 2.5E-107 | 143 | 476 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q10351|PIGS_SCHPO | GPI transamidase component PIG-S homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gpi17 PE=3 SV=1 | 16 | 479 | 6.0E-48 |
| sp|Q5XI31|PIGS_RAT | GPI transamidase component PIG-S OS=Rattus norvegicus GN=Pigs PE=2 SV=3 | 151 | 479 | 2.0E-45 |
| sp|Q3SZL5|PIGS_BOVIN | GPI transamidase component PIG-S OS=Bos taurus GN=PIGS PE=2 SV=3 | 151 | 479 | 4.0E-43 |
| sp|Q96S52|PIGS_HUMAN | GPI transamidase component PIG-S OS=Homo sapiens GN=PIGS PE=1 SV=3 | 154 | 479 | 5.0E-41 |
| sp|Q6PD26|PIGS_MOUSE | GPI transamidase component PIG-S OS=Mus musculus GN=Pigs PE=1 SV=3 | 151 | 479 | 6.0E-41 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q10351|PIGS_SCHPO | GPI transamidase component PIG-S homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gpi17 PE=3 SV=1 | 16 | 479 | 6.0E-48 |
| sp|Q5XI31|PIGS_RAT | GPI transamidase component PIG-S OS=Rattus norvegicus GN=Pigs PE=2 SV=3 | 151 | 479 | 2.0E-45 |
| sp|Q3SZL5|PIGS_BOVIN | GPI transamidase component PIG-S OS=Bos taurus GN=PIGS PE=2 SV=3 | 151 | 479 | 4.0E-43 |
| sp|Q96S52|PIGS_HUMAN | GPI transamidase component PIG-S OS=Homo sapiens GN=PIGS PE=1 SV=3 | 154 | 479 | 5.0E-41 |
| sp|Q6PD26|PIGS_MOUSE | GPI transamidase component PIG-S OS=Mus musculus GN=Pigs PE=1 SV=3 | 151 | 479 | 6.0E-41 |
| sp|Q04080|GPI17_YEAST | GPI transamidase component GPI17 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GPI17 PE=1 SV=1 | 151 | 461 | 1.0E-20 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0042765 | GPI-anchor transamidase complex | Yes |
| GO:0016255 | attachment of GPI anchor to protein | Yes |
| GO:0019538 | protein metabolic process | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0005575 | cellular_component | No |
| GO:0008303 | caspase complex | No |
| GO:0008152 | metabolic process | No |
| GO:0140534 | endoplasmic reticulum protein-containing complex | No |
| GO:0032991 | protein-containing complex | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:1905369 | endopeptidase complex | No |
| GO:0008150 | biological_process | No |
| GO:0098796 | membrane protein complex | No |
| GO:0043412 | macromolecule modification | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:1905368 | peptidase complex | No |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0036211 | protein modification process | No |
| GO:1902494 | catalytic complex | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 44 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 21 | 38 | 17 |
| 2 | 449 | 468 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Agabi119p4|110030 MSSSLKEPSALFYQSKAVKRGIIFSYWTLILLAVPLWWHTTSIQRLSLPESRINSRAQEHLELPVSLCVADVEIK SSLQSFLDAKARDDSGHWWGVKSRVYSRNDCPTTSSYLVRDSQTTIVRRNEIHLPLSNFPDAFETLANLINPPLK TNHNNRVVQYSRQYRLAFTLLNEDASAGSSVSNWDVRAGLVSRIQPILHKLEPLHNFTIESQVQFNGRLAFQPQE NSDGSYGVTPEDLTVFINSAEWSLSSSVSNDPVLHFVLFIPSALRRPLHILSPDGQISRSRSFLLPQWGGIVIYN PPTDDTGKNTNLPSETNEQIFKEFSKELLSLLGVPMLPNGVKRHISEAANLSDWQIDALMRRRTAENVKNTQETL TSIVKLVNQIDNMPVKEDVRDDVQGALEALEQSHSARSLGEAFRYSAQATTLSSRAFFNPGMLALLYFPAEHKYA VYTPLFASAVIPLLIAALKEIVAWKKERRASVKDSSSTTDSNP* |
| Coding | >Agabi119p4|110030 ATGTCCTCCTCCCTCAAGGAGCCGTCGGCCCTTTTCTACCAGTCAAAGGCAGTCAAACGCGGCATAATCTTCTCC TACTGGACCCTCATACTTCTCGCAGTGCCCCTGTGGTGGCATACTACTAGTATTCAGCGCCTCTCCCTCCCAGAA TCTCGGATTAACTCCCGTGCGCAGGAGCACCTCGAACTCCCCGTCAGTTTATGTGTTGCCGACGTCGAGATCAAA TCTAGTCTACAAAGTTTCCTCGATGCAAAAGCTAGGGACGACTCAGGACATTGGTGGGGCGTAAAATCTCGCGTC TATAGCAGAAACGACTGCCCGACTACCTCTTCCTACCTCGTGAGAGACAGTCAAACGACCATTGTTAGGCGGAAT GAAATTCATTTGCCGCTTTCGAATTTTCCCGATGCATTCGAAACACTTGCTAACCTCATAAACCCGCCCCTGAAA ACGAACCACAACAACCGCGTCGTCCAATATTCCCGGCAGTATCGTCTCGCATTCACTCTTCTGAACGAAGATGCA TCCGCCGGAAGCTCAGTTTCAAATTGGGATGTTCGTGCTGGCCTAGTTTCCAGGATACAGCCCATCTTACATAAG CTGGAACCGTTGCATAATTTCACGATTGAAAGTCAAGTTCAATTTAATGGACGGCTGGCTTTCCAACCTCAGGAA AATTCTGACGGATCTTATGGCGTAACTCCGGAAGACTTGACTGTTTTCATCAATTCAGCTGAATGGTCCCTTTCC TCGAGCGTTTCAAATGATCCCGTACTCCATTTCGTTCTGTTCATTCCTTCAGCCCTTCGTCGACCATTACACATC TTGTCTCCTGACGGTCAAATTTCACGCTCGAGGTCCTTCCTTCTTCCACAGTGGGGCGGTATAGTCATTTACAAC CCTCCCACCGATGATACCGGCAAAAACACGAACTTGCCATCCGAAACAAATGAGCAAATTTTCAAAGAATTTTCC AAAGAGCTCCTCAGTCTCCTCGGTGTTCCCATGTTGCCGAATGGTGTCAAACGGCATATCTCTGAAGCGGCCAAT CTTTCGGATTGGCAAATCGATGCCCTCATGCGACGTCGTACCGCAGAAAACGTCAAAAATACGCAGGAGACTCTT ACGAGTATTGTTAAACTGGTCAATCAAATAGACAATATGCCTGTCAAAGAGGATGTGAGAGACGATGTACAGGGA GCTCTGGAGGCATTAGAACAGTCGCATTCCGCGAGATCTCTTGGAGAAGCTTTCAGATACTCTGCGCAAGCCACG ACTCTTTCCTCTCGAGCATTCTTCAATCCCGGCATGCTTGCATTACTTTATTTCCCAGCTGAACATAAATACGCT GTTTATACGCCATTATTTGCGAGCGCCGTTATTCCCTTGTTAATCGCCGCACTGAAAGAAATCGTAGCCTGGAAG AAAGAGAGGCGTGCCAGCGTCAAAGATAGCAGCAGCACGACCGATAGTAACCCTTAG |
| Transcript | >Agabi119p4|110030 ATGTCCTCCTCCCTCAAGGAGCCGTCGGCCCTTTTCTACCAGTCAAAGGCAGTCAAACGCGGCATAATCTTCTCC TACTGGACCCTCATACTTCTCGCAGTGCCCCTGTGGTGGCATACTACTAGTATTCAGCGCCTCTCCCTCCCAGAA TCTCGGATTAACTCCCGTGCGCAGGAGCACCTCGAACTCCCCGTCAGTTTATGTGTTGCCGACGTCGAGATCAAA TCTAGTCTACAAAGTTTCCTCGATGCAAAAGCTAGGGACGACTCAGGACATTGGTGGGGCGTAAAATCTCGCGTC TATAGCAGAAACGACTGCCCGACTACCTCTTCCTACCTCGTGAGAGACAGTCAAACGACCATTGTTAGGCGGAAT GAAATTCATTTGCCGCTTTCGAATTTTCCCGATGCATTCGAAACACTTGCTAACCTCATAAACCCGCCCCTGAAA ACGAACCACAACAACCGCGTCGTCCAATATTCCCGGCAGTATCGTCTCGCATTCACTCTTCTGAACGAAGATGCA TCCGCCGGAAGCTCAGTTTCAAATTGGGATGTTCGTGCTGGCCTAGTTTCCAGGATACAGCCCATCTTACATAAG CTGGAACCGTTGCATAATTTCACGATTGAAAGTCAAGTTCAATTTAATGGACGGCTGGCTTTCCAACCTCAGGAA AATTCTGACGGATCTTATGGCGTAACTCCGGAAGACTTGACTGTTTTCATCAATTCAGCTGAATGGTCCCTTTCC TCGAGCGTTTCAAATGATCCCGTACTCCATTTCGTTCTGTTCATTCCTTCAGCCCTTCGTCGACCATTACACATC TTGTCTCCTGACGGTCAAATTTCACGCTCGAGGTCCTTCCTTCTTCCACAGTGGGGCGGTATAGTCATTTACAAC CCTCCCACCGATGATACCGGCAAAAACACGAACTTGCCATCCGAAACAAATGAGCAAATTTTCAAAGAATTTTCC AAAGAGCTCCTCAGTCTCCTCGGTGTTCCCATGTTGCCGAATGGTGTCAAACGGCATATCTCTGAAGCGGCCAAT CTTTCGGATTGGCAAATCGATGCCCTCATGCGACGTCGTACCGCAGAAAACGTCAAAAATACGCAGGAGACTCTT ACGAGTATTGTTAAACTGGTCAATCAAATAGACAATATGCCTGTCAAAGAGGATGTGAGAGACGATGTACAGGGA GCTCTGGAGGCATTAGAACAGTCGCATTCCGCGAGATCTCTTGGAGAAGCTTTCAGATACTCTGCGCAAGCCACG ACTCTTTCCTCTCGAGCATTCTTCAATCCCGGCATGCTTGCATTACTTTATTTCCCAGCTGAACATAAATACGCT GTTTATACGCCATTATTTGCGAGCGCCGTTATTCCCTTGTTAATCGCCGCACTGAAAGAAATCGTAGCCTGGAAG AAAGAGAGGCGTGCCAGCGTCAAAGATAGCAGCAGCACGACCGATAGTAACCCTTAG |
| Gene | >Agabi119p4|110030 ATGTCCTCCTCCCTCAAGGAGCCGTCGGCCCTTTTCTACCAGTCAAAGGCAGTCAAACGCGGCATAATCTTCTCC TACTGGACCCTCATACTTCTCGCAGTGCCCCTGTGGTGGCATACTACTAGTATTCAGCGCCTCTCCCTCCCAGAA TCTCGGATTAACTCCCGTGCGCAGGAGCACCTCGAACTCCCCGTCAGTTTATGTGTTGCCGACGTCGAGATCAAA TCTAGTCTACAAAGTTTCCTCGATGCAAAAGCTAGGGACGACTCAGGACATTGGTGGGGCGTAAAATCTCGCGTC TATAGCAGAAACGACTGCCGTTAGTCTTTCGATGTCAGAGTCTGACCTGGAGGCTGATCATGACCAGCGACTACC TCTTCCTACCTCGTGAGAGACAGTCAAACGACCATTGTTAGGCGGAATGAAATTCATTTGCCGCTTTCGAGTGAG TCTAGTTACTCTCTGGTTGATAACTCTTGATTTTGAACCCCGACCCACCAGATTTTCCCGATGCATTCGAAACAC TTGCTAACCTCATAAACCCGCCCCTGAAAACGAACCACAACAACCGCGTCGTCCAATATTCCCGGCAGTATCGTC TCGCATTCACTCTTCTGAACGAAGATGCATCCGCCGGAAGCTCAGTTTCAAATTGGGATGTTCGTGCTGGCCTAG TTTGTGAGTAAAACTCTTTTTCAGTCCAGAATAGTCCGAAAACTGAACTGGTGTAGCCAGGATACAGCCCATCTT ACATAAGCTGGAACCGTTGCATAATTTCACGATTGAAAGTCAAGTTCAATTTAATGGACGGCTGGCTTTCCAACC TCAGGAAAATTCTGACGGATCTTATGGCGTAACTCCGGAAGACTTGACTGTTTTCATCAATTCAGCTGAATGGTC CCTTTGTGCGTTGCTCATTAGCCTCCTGTTCTCTCAACTTATCGATTGCTTATCAGCCTCGAGCGTTTCAAATGA TCCCGTACTCCATTTCGTTCTGTTCATTCCTTCAGCCCTTCGTCGACCATTACACATCTTGTCTCCTGACGGTTG GTCTTCTTGCCCAACAACAAGTTTTCGTTATCTCACTGGCTCATAGGTCAAATTTCACGCTCGAGGTCCTTCCTT CTTCCACAGTGGGGCGGTATAGTCATTTACAACCCTCCCACCGATGATACCGGCAAAAACACGAACTTGCCATCC GAAACAAATGAGCAAATTTTCAAAGAATTTTCCAAAGAGCTCCTCAGTCTCCTCGGTGTTCCCATGTTGCCGAAT GGTGTCAAACGGCATATCTCTGAAGCGGCCAATCTTTCGGATTGGCAAATCGATGCCCTCATGCGACGTCGTACC GCAGAAAACGTCAAAAATACGCAGGAGACTCTTACGAGTATTGTTAAACTGGTCAATCAAATAGACAATATGCCT GTCAAAGAGGATGTGAGAGACGATGTACAGGGAGCTCTGGAGGCATTAGAACAGGTGGGAATTCTTCACCTCAAA AAAAGTTTTCTGCTTCGCTCACGCAACAATACCATCCAGTCGCATTCCGCGAGATCTCTTGGAGAAGCTTTCAGA TACTCTGCGCAAGCCACGACTCTTTCCTCTCGAGCATTCTTCAATCCCGGCATGCTTGCATTACTTTATTTCCCA GCTGAACATAAATACGCTGTTTATACGCCATTATTTGCGAGCGCCGTTATTCCCTTGTTAATCGCCGCACTGAAA GAAATCGTAGCCTGGAAGAAAGAGAGGCGTGCCAGCGTCAAAGATAGCAGCAGCACGACCGATAGTAACCCTTAG |