Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|109950
Gene name
Locationscaffold_08:874636..875497
Strand+
Gene length (bp)861
Transcript length (bp)435
Coding sequence length (bp)435
Protein length (aa) 145

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00241 Cofilin_ADF Cofilin/tropomyosin-type actin-binding protein 6.0E-27 10 129

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P34121|COAA_DICDI Coactosin OS=Dictyostelium discoideum GN=coaA PE=1 SV=1 1 143 1.0E-27
sp|Q6GM14|DBNLB_XENLA Drebrin-like protein B OS=Xenopus laevis GN=dbnl-b PE=2 SV=1 8 142 4.0E-19
sp|Q9UJU6|DBNL_HUMAN Drebrin-like protein OS=Homo sapiens GN=DBNL PE=1 SV=1 8 141 8.0E-19
sp|A6H7G2|DBNL_BOVIN Drebrin-like protein OS=Bos taurus GN=DBNL PE=2 SV=1 11 141 4.0E-18
sp|Q7ZXQ9|DBNLA_XENLA Drebrin-like protein A OS=Xenopus laevis GN=dbnl-a PE=2 SV=1 12 142 4.0E-18
[Show all]
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Swissprot ID Swissprot Description Start End E-value
sp|P34121|COAA_DICDI Coactosin OS=Dictyostelium discoideum GN=coaA PE=1 SV=1 1 143 1.0E-27
sp|Q6GM14|DBNLB_XENLA Drebrin-like protein B OS=Xenopus laevis GN=dbnl-b PE=2 SV=1 8 142 4.0E-19
sp|Q9UJU6|DBNL_HUMAN Drebrin-like protein OS=Homo sapiens GN=DBNL PE=1 SV=1 8 141 8.0E-19
sp|A6H7G2|DBNL_BOVIN Drebrin-like protein OS=Bos taurus GN=DBNL PE=2 SV=1 11 141 4.0E-18
sp|Q7ZXQ9|DBNLA_XENLA Drebrin-like protein A OS=Xenopus laevis GN=dbnl-a PE=2 SV=1 12 142 4.0E-18
sp|Q557J6|DBNL_DICDI Drebrin-like protein OS=Dictyostelium discoideum GN=abpE-1 PE=2 SV=1 3 142 3.0E-16
sp|Q9VU84|DBNL_DROME Drebrin-like protein OS=Drosophila melanogaster GN=Abp1 PE=1 SV=1 9 139 5.0E-15
sp|Q9P7E8|APP1_SCHPO Protein app1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=app1 PE=2 SV=1 9 141 5.0E-14
sp|Q9JHL4|DBNL_RAT Drebrin-like protein OS=Rattus norvegicus GN=Dbnl PE=1 SV=1 9 141 1.0E-12
sp|Q62418|DBNL_MOUSE Drebrin-like protein OS=Mus musculus GN=Dbnl PE=1 SV=2 9 141 2.0E-12
sp|Q2HJ57|COTL1_BOVIN Coactosin-like protein OS=Bos taurus GN=COTL1 PE=2 SV=3 12 143 2.0E-11
sp|Q14019|COTL1_HUMAN Coactosin-like protein OS=Homo sapiens GN=COTL1 PE=1 SV=3 12 142 6.0E-11
sp|B0BNA5|COTL1_RAT Coactosin-like protein OS=Rattus norvegicus GN=Cotl1 PE=1 SV=1 12 142 8.0E-11
sp|Q9CQI6|COTL1_MOUSE Coactosin-like protein OS=Mus musculus GN=Cotl1 PE=1 SV=3 12 142 1.0E-10
sp|Q9QXS6|DREB_MOUSE Drebrin OS=Mus musculus GN=Dbn1 PE=1 SV=4 12 133 5.0E-10
sp|Q07266|DREB_RAT Drebrin OS=Rattus norvegicus GN=Dbn1 PE=1 SV=3 12 133 5.0E-10
sp|Q16643|DREB_HUMAN Drebrin OS=Homo sapiens GN=DBN1 PE=1 SV=4 12 133 6.0E-10
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GO

GO Term Description Terminal node
GO:0003779 actin binding Yes
GO:0005515 protein binding No
GO:0008092 cytoskeletal protein binding No
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 67 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|109950
MADVTDQTINEAYLKVRDDKQETNWLLLDYESDRSDKLKLTSTGTGGLAELRDRLDDSKASFAYVRVKYSNDKES
VREKFILVIWIGPSCKVMRKAKISVHTADVKNVLRVFSIEVPARERDDLREEPIVIRLRKAGGASYDGV*
Coding >Agabi119p4|109950
ATGGCAGACGTCACCGACCAGACAATCAACGAGGCATATCTCAAAGTCCGCGATGACAAGCAGGAGACAAATTGG
TTACTACTTGACTACGAATCTGATCGCTCCGACAAGTTAAAGCTCACGAGCACTGGCACTGGTGGCCTTGCGGAA
CTCAGAGACCGCCTCGACGATTCCAAAGCCTCATTTGCGTACGTCCGTGTCAAGTACTCCAATGACAAGGAATCC
GTCAGGGAAAAGTTTATACTTGTGATTTGGATAGGTCCGAGTTGCAAGGTGATGAGAAAAGCAAAGATCTCTGTA
CATACCGCGGATGTCAAGAATGTTTTGAGAGTCTTTTCGATTGAGGTCCCCGCGAGGGAGAGAGATGATCTGAGG
GAAGAACCTATCGTAATTCGTTTGCGGAAGGCTGGTGGTGCGAGCTATGATGGGGTGTAG
Transcript >Agabi119p4|109950
ATGGCAGACGTCACCGACCAGACAATCAACGAGGCATATCTCAAAGTCCGCGATGACAAGCAGGAGACAAATTGG
TTACTACTTGACTACGAATCTGATCGCTCCGACAAGTTAAAGCTCACGAGCACTGGCACTGGTGGCCTTGCGGAA
CTCAGAGACCGCCTCGACGATTCCAAAGCCTCATTTGCGTACGTCCGTGTCAAGTACTCCAATGACAAGGAATCC
GTCAGGGAAAAGTTTATACTTGTGATTTGGATAGGTCCGAGTTGCAAGGTGATGAGAAAAGCAAAGATCTCTGTA
CATACCGCGGATGTCAAGAATGTTTTGAGAGTCTTTTCGATTGAGGTCCCCGCGAGGGAGAGAGATGATCTGAGG
GAAGAACCTATCGTAATTCGTTTGCGGAAGGCTGGTGGTGCGAGCTATGATGGGGTGTAG
Gene >Agabi119p4|109950
ATGGCAGACGTCACCGACCAGACAATCAACGAGGGTCAGTTGAGTTTAACCTCAGTTTCATCCGACGGATCCTAA
TATTCTATCAAGCATATCTCAAAGTCCGCGATGACAAGCAGGAGACAAATTGGTTACTACTTGACTACGAATCTG
ATCGCTCCGACAAGTTAAAGCTCACGAGCACTGGCACTGGTGGCCTTGCGGAACTCAGAGACCGCCTCGACGATT
CCAAAGCCTCATTTGCGTACGTCCGTGTCAAGTACTCCAATGACAAGGAATCCGTCAGGGAAAAGTTTATACTTG
TGGTCCGTGACCTTTGTCTCCTTTCGTTCGATTTCCGAAGTTCCTTCTGTTGACTCCTATCTTTGTTCTCCGTCG
GTGACCGTCACTCGTCTCTCTGGTTCTCTCCTTCTCTCGTCCGTGGTTCGCGCCTTCGTGATGATTCTCACTGGT
TTTTGACATGTCAACGGTGTTTGCTTTATCGACTTGGCGACCTCGAACTTCATACTATGCGCAAAAATAATGTTA
TTTGACACCGACAGATTTGGATAGGTCCGAGTTGCAAGGTGATGAGAAAAGCAAAGGTTCGTCGTTCAATTTCTC
ATGGTTTCTCAATCTGATTCGCCAATCCGTGTGGTCTACAATCTATCTACTCCATTAGATCTCTGTACATACCGC
GGATGTCAAGAATGTTTTGAGAGTCTTTTCGATTGAGGTCCCCGCGAGGGAGAGAGATGATCTGAGGGAAGAACC
TATCGTAATTCGTTTGCGGAAGGTAAATATTCAGAAGTTCAGTTATTTAGTCTTGGGAATATGCTGATCGGGTGT
TTATAGGCTGGTGGTGCGAGCTATGATGGGGTGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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