Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|105890
Gene name
Locationscaffold_07:2164122..2164560
Strand-
Gene length (bp)438
Transcript length (bp)336
Coding sequence length (bp)336
Protein length (aa) 112

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01185 Hydrophobin Fungal hydrophobin 3.8E-05 31 103

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P49072|HYP1_AGABI Hydrophobin-1 OS=Agaricus bisporus GN=hypA PE=2 SV=1 4 106 7.0E-07

GO

GO Term Description Terminal node
GO:0005199 structural constituent of cell wall Yes
GO:0009277 fungal-type cell wall Yes
GO:0005198 structural molecule activity No
GO:0030312 external encapsulating structure No
GO:0005618 cell wall No
GO:0110165 cellular anatomical entity No
GO:0003674 molecular_function No
GO:0005575 cellular_component No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|105890
MHRLTTILFFSATLAKVKGMPGRALYARDGCNVNQVTHCCQEMTTTDDAHAIQILHDLGFPIDSNAVVVGKKCTE
HDGNNCVASPVCCSGNLDHETALNCSPVNHNGVERD*
Coding >Agabi119p4|105890
ATGCATCGCCTTACAACTATCCTGTTTTTCTCGGCGACCTTGGCTAAGGTGAAGGGCATGCCTGGACGTGCTCTA
TATGCCAGGGATGGCTGCAACGTCAATCAAGTCACCCACTGCTGTCAGGAGATGACCACAACAGATGATGCCCAT
GCCATTCAAATACTTCATGACCTGGGCTTTCCAATTGATTCCAATGCTGTGGTTGTTGGCAAAAAGTGCACTGAA
CACGATGGAAACAACTGTGTTGCATCCCCCGTTTGCTGCAGTGGAAACCTGGACCACGAGACTGCACTGAATTGT
AGTCCCGTTAATCACAACGGAGTTGAGCGCGACTGA
Transcript >Agabi119p4|105890
ATGCATCGCCTTACAACTATCCTGTTTTTCTCGGCGACCTTGGCTAAGGTGAAGGGCATGCCTGGACGTGCTCTA
TATGCCAGGGATGGCTGCAACGTCAATCAAGTCACCCACTGCTGTCAGGAGATGACCACAACAGATGATGCCCAT
GCCATTCAAATACTTCATGACCTGGGCTTTCCAATTGATTCCAATGCTGTGGTTGTTGGCAAAAAGTGCACTGAA
CACGATGGAAACAACTGTGTTGCATCCCCCGTTTGCTGCAGTGGAAACCTGGACCACGAGACTGCACTGAATTGT
AGTCCCGTTAATCACAACGGAGTTGAGCGCGACTGA
Gene >Agabi119p4|105890
ATGCATCGCCTTACAACTATCCTGTTTTTCTCGGCGACCTTGGCTAAGGTGAAGGGCATGCCTGGACGTGCTCTA
TATGCCAGGGATGGCTGCAACGTCAATCAAGTCACCCACTGCTGTCAGGAGATGACCACAACAGATGATGCCCAT
GCCATTCAAATACTTCATGACCTGGGCTTTCCAATTGATTCCAATGCTGTGGTTGTTGGCAAAAAGTGCACTGAA
CACGATGGAAACAACTGGTTAGTCGCTGGCTACATTTGATTGCTTTAAAACTCTTAACAATGGAATAGTGTTGCA
TCCCCCGTTTGCTGCAGTGGAAACCTGGACCGTTGGTGTTGCCTTTACATGCTACAATAGAAGACTGACTACTTG
GATACAGACGAGACTGCACTGAATTGTAGTCCCGTTAATCACAACGGAGTTGAGCGCGACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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