Fungal Genomics

General Properties

Protein ID	Agabi119p4|103830
Gene name
Location	scaffold_07:1590247..1592442
Strand	-
Gene length (bp)	2195
Transcript length (bp)	1776
Coding sequence length (bp)	1776
Protein length (aa)	592

Overview

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PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF08646	Rep_fac-A_C	Replication factor-A C terminal domain	3.0E-44	438	581
PF16900	REPA_OB_2	Replication protein A OB domain	1.2E-32	278	374
PF04057	Rep-A_N	Replication factor-A protein 1, N-terminal domain	1.3E-17	22	107
PF01336	tRNA_anti-codon	OB-fold nucleic acid binding domain	1.4E-09	170	252

Swissprot hits

GO

GO Term	Description	Terminal node
GO:0005634	nucleus	Yes
GO:0003677	DNA binding	Yes
GO:0006260	DNA replication	Yes
GO:0003676	nucleic acid binding	Yes
GO:0090304	nucleic acid metabolic process	No
GO:1901360	organic cyclic compound metabolic process	No
GO:0044260	cellular macromolecule metabolic process	No
GO:0044238	primary metabolic process	No
GO:0005488	binding	No
GO:0043227	membrane-bounded organelle	No
GO:0043231	intracellular membrane-bounded organelle	No
GO:0006807	nitrogen compound metabolic process	No
GO:0005575	cellular_component	No
GO:0046483	heterocycle metabolic process	No
GO:0008152	metabolic process	No
GO:0003674	molecular_function	No
GO:0043229	intracellular organelle	No
GO:0006725	cellular aromatic compound metabolic process	No
GO:0006259	DNA metabolic process	No
GO:0097159	organic cyclic compound binding	No
GO:0043226	organelle	No
GO:0009987	cellular process	No
GO:0071704	organic substance metabolic process	No
GO:0044237	cellular metabolic process	No
GO:1901363	heterocyclic compound binding	No
GO:0043170	macromolecule metabolic process	No
GO:0006139	nucleobase-containing compound metabolic process	No
GO:0110165	cellular anatomical entity	No
GO:0034641	cellular nitrogen compound metabolic process	No
GO:0008150	biological_process	No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID	5
Orthogroup	6777
Change Orthofinder run	5: Agaricus - all strains

Species	Protein ID
Agaricus bisporus var bisporus H39	AgabiH39|103830
Agaricus bisporus var bisporus H97	AgabiH97|103830
Agaricus bisporus var burnettii H119p4	Agabi119p4|103830 (this protein)

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Agabi119p4|103830 MNEYRLSVGCCEDMQNASNIDDDVFLREHVVQFLSVKKVNATGGAGDRYRLIISDGKYYIQAMLATQCNSLVETD QIKKFSVAAIERASSNTVQGKRLVIVLSLRILGYPNEKINNPQALDPVNSGPDQNASAEAPPAPAPGGSRQVNKP NTSGVATFPIENLSPYQNNWTIKARVTQKSDIKNWSNSRGEGKLFSVTLMDDSGEIKATAFNSVVDELFPRLEDS KVYYISKARVNFAKKKFSNVTNDYELTLERSTQITECHETTGLPEMRYTFVGLEKLENLNKDAICDVIGVLKDIS AVSEITARTTNRSFQKRELTLVDKSGCSIQLTLWGKQAESFTGEPGSIGAFKGVKVGDFGGVSLSTTPSTHIQLD PHIQDCYTLRGWWDSQGSDMSFQSKTVIGGGGGLGIAFNRAQVRSLNEIKEAEVGMGDKADTFCCQGTIVHIRDQ NLLYPACPGNNCNKKMSMSGDTWVCDKCGTNAETPEYRYILSMAVADWSGQAWLQGFNEAAVIVFGMSGNELYDL KMRDEDKYNAVIHKAHCQTYNFACRAKKDSYEDRVRIRYGISRIEKVDYHAETQYLRDLLRSPWAA*
Coding	>Agabi119p4|103830 ATGAACGAGTACAGGCTCTCCGTTGGCTGTTGCGAGGACATGCAAAATGCCTCCAACATCGACGACGACGTCTTT CTCAGAGAGCACGTCGTTCAGTTTCTTTCCGTCAAGAAAGTCAATGCAACTGGTGGTGCCGGCGATCGCTACCGT CTGATTATCTCAGATGGAAAATATTACATCCAAGCTATGCTGGCTACCCAGTGCAACTCCTTGGTTGAGACCGAC CAGATCAAAAAGTTCAGCGTTGCTGCCATCGAAAGGGCTTCGTCAAACACTGTCCAGGGGAAACGGTTGGTCATT GTCCTCAGTTTACGCATCCTCGGATATCCGAACGAGAAAATCAACAACCCTCAGGCCCTTGATCCTGTCAACTCT GGTCCAGACCAAAATGCGTCTGCAGAGGCACCACCAGCTCCAGCTCCGGGCGGCAGCCGTCAGGTAAACAAGCCA AATACCTCTGGCGTGGCAACTTTCCCGATCGAAAACTTGAGCCCGTATCAGAACAACTGGACCATCAAGGCTCGA GTTACTCAGAAAAGTGACATCAAGAACTGGTCTAATTCAAGGGGCGAAGGCAAACTCTTCAGTGTTACGCTTATG GATGACAGTGGGGAGATCAAAGCCACTGCCTTCAATTCCGTTGTCGATGAACTCTTCCCTCGATTGGAAGACAGC AAAGTCTATTACATCTCAAAAGCTCGCGTCAACTTCGCCAAGAAAAAATTCAGCAACGTGACGAATGATTACGAG TTGACCCTTGAGAGGTCCACTCAGATCACAGAATGTCACGAGACAACTGGATTACCTGAAATGAGGTACACGTTT GTTGGTCTTGAGAAGCTCGAAAACCTCAACAAAGATGCAATCTGCGATGTCATTGGCGTACTCAAAGATATCAGC GCCGTTTCTGAAATCACAGCTCGAACGACAAATCGATCTTTCCAAAAACGAGAACTTACTCTAGTTGACAAGAGC GGTTGCTCAATACAATTAACATTATGGGGTAAACAGGCAGAGTCGTTCACGGGTGAACCGGGCTCCATTGGTGCC TTCAAGGGCGTCAAAGTCGGTGACTTTGGGGGTGTTTCATTATCCACGACGCCCTCGACTCATATACAACTGGAT CCTCACATCCAGGATTGTTACACCCTTCGCGGCTGGTGGGACTCTCAAGGCTCCGACATGTCTTTCCAATCCAAA ACTGTTATTGGAGGTGGTGGTGGTCTCGGAATTGCTTTCAACCGTGCCCAAGTTCGTAGTCTGAACGAAATCAAA GAAGCCGAGGTGGGCATGGGAGATAAGGCCGATACATTCTGTTGTCAAGGAACAATCGTTCATATCAGAGACCAA AACCTTCTTTACCCTGCCTGCCCAGGTAACAATTGTAACAAGAAAATGAGTATGTCGGGTGATACTTGGGTGTGT GATAAATGTGGTACGAACGCGGAGACGCCTGAATATAGATATATTCTTTCTATGGCTGTTGCCGACTGGTCTGGC CAGGCATGGCTCCAGGGATTTAATGAAGCCGCAGTGATAGTTTTCGGTATGAGCGGAAATGAGCTCTACGATTTG AAGATGCGGGATGAAGACAAATATAACGCCGTCATTCACAAGGCCCATTGCCAAACATATAATTTCGCATGTCGC GCCAAGAAAGATTCATATGAAGATCGCGTTCGTATTCGATATGGTATTTCTCGGATAGAGAAAGTCGATTATCAT GCAGAAACCCAATATCTACGAGACTTGCTTCGTAGTCCTTGGGCTGCATAG
Transcript	>Agabi119p4|103830 ATGAACGAGTACAGGCTCTCCGTTGGCTGTTGCGAGGACATGCAAAATGCCTCCAACATCGACGACGACGTCTTT CTCAGAGAGCACGTCGTTCAGTTTCTTTCCGTCAAGAAAGTCAATGCAACTGGTGGTGCCGGCGATCGCTACCGT CTGATTATCTCAGATGGAAAATATTACATCCAAGCTATGCTGGCTACCCAGTGCAACTCCTTGGTTGAGACCGAC CAGATCAAAAAGTTCAGCGTTGCTGCCATCGAAAGGGCTTCGTCAAACACTGTCCAGGGGAAACGGTTGGTCATT GTCCTCAGTTTACGCATCCTCGGATATCCGAACGAGAAAATCAACAACCCTCAGGCCCTTGATCCTGTCAACTCT GGTCCAGACCAAAATGCGTCTGCAGAGGCACCACCAGCTCCAGCTCCGGGCGGCAGCCGTCAGGTAAACAAGCCA AATACCTCTGGCGTGGCAACTTTCCCGATCGAAAACTTGAGCCCGTATCAGAACAACTGGACCATCAAGGCTCGA GTTACTCAGAAAAGTGACATCAAGAACTGGTCTAATTCAAGGGGCGAAGGCAAACTCTTCAGTGTTACGCTTATG GATGACAGTGGGGAGATCAAAGCCACTGCCTTCAATTCCGTTGTCGATGAACTCTTCCCTCGATTGGAAGACAGC AAAGTCTATTACATCTCAAAAGCTCGCGTCAACTTCGCCAAGAAAAAATTCAGCAACGTGACGAATGATTACGAG TTGACCCTTGAGAGGTCCACTCAGATCACAGAATGTCACGAGACAACTGGATTACCTGAAATGAGGTACACGTTT GTTGGTCTTGAGAAGCTCGAAAACCTCAACAAAGATGCAATCTGCGATGTCATTGGCGTACTCAAAGATATCAGC GCCGTTTCTGAAATCACAGCTCGAACGACAAATCGATCTTTCCAAAAACGAGAACTTACTCTAGTTGACAAGAGC GGTTGCTCAATACAATTAACATTATGGGGTAAACAGGCAGAGTCGTTCACGGGTGAACCGGGCTCCATTGGTGCC TTCAAGGGCGTCAAAGTCGGTGACTTTGGGGGTGTTTCATTATCCACGACGCCCTCGACTCATATACAACTGGAT CCTCACATCCAGGATTGTTACACCCTTCGCGGCTGGTGGGACTCTCAAGGCTCCGACATGTCTTTCCAATCCAAA ACTGTTATTGGAGGTGGTGGTGGTCTCGGAATTGCTTTCAACCGTGCCCAAGTTCGTAGTCTGAACGAAATCAAA GAAGCCGAGGTGGGCATGGGAGATAAGGCCGATACATTCTGTTGTCAAGGAACAATCGTTCATATCAGAGACCAA AACCTTCTTTACCCTGCCTGCCCAGGTAACAATTGTAACAAGAAAATGAGTATGTCGGGTGATACTTGGGTGTGT GATAAATGTGGTACGAACGCGGAGACGCCTGAATATAGATATATTCTTTCTATGGCTGTTGCCGACTGGTCTGGC CAGGCATGGCTCCAGGGATTTAATGAAGCCGCAGTGATAGTTTTCGGTATGAGCGGAAATGAGCTCTACGATTTG AAGATGCGGGATGAAGACAAATATAACGCCGTCATTCACAAGGCCCATTGCCAAACATATAATTTCGCATGTCGC GCCAAGAAAGATTCATATGAAGATCGCGTTCGTATTCGATATGGTATTTCTCGGATAGAGAAAGTCGATTATCAT GCAGAAACCCAATATCTACGAGACTTGCTTCGTAGTCCTTGGGCTGCATAG
Gene	>Agabi119p4|103830 ATGAACGAGTACAGGCTCTCCGTTGGCTGTTGCGAGGACATGCAAAATGCCTCCAACATCGACGACGACGTCTTT CTCAGAGAGCACGTCGTTCAGTTTCTTTCCGTCAAGAAAGTCAATGCAACTGGTGGTGCCGGCGATCGCTACCGT CTGATTATCTCAGATGGAAAATATTACATCCAAGCTATGCTGGCTACCCAGTGCAACTCCTTGGTTGAGACCGAC CAGATCAAAAAGTTCAGCGTTGCTGCCATCGAAAGGGCTTCGTCAAACACTGTCCAGGGGAAACGGTATAGTCTT CTGTGCCTTATTTGAAGCACCGGGATTCACCATCAATAGGTTGGTCATTGTCCTCAGTTTACGCATCCTCGGATA TCCGAACGAGAAAATCAACAACCCTCAGGCCCTTGATCCTGTCAACTCTGGTCCAGACCAAAATGCGTCTGCAGA GGCACCACCAGCTCCAGCTCCGGGCGGCAGCCGTCAGGTAAACAAGCCAAATACCTCTGGCGTGGCAACTTTCCC GATCGAAAACTTGAGCCCGTATCAGAACAACTGGACCATCAAGGCTCGAGTTACTCAGAAAAGTGACATCAAGAA CTGGTCTAATTCAAGGGGCGAAGGCAAACTCTTCAGTGTTACGCTTATGGATGACAGTGGGGAGATCAAAGCCAC TGCCTTCAATTCCGTTGTCGATGAACTCTTCCCTCGATTGGAAGACAGCAAAGTCTATTACATCTCAAAAGCTCG CGTCAACTTCGCCAAGAAAAAATTCAGCAACGTGACGAATGATTACGAGTTGACCCTTGAGAGGTCCACTCAGAT CACAGAAGTGAGCCTCCCTATCACCGGAATAGCTTGTATTAGATAGCTGATGCATGGTCAGTGTCACGAGACAAC TGGATTACCTGAAATGAGGTACACGTTTGTTGGTCTTGAGAAGCTCGAAAACCTCAACAAAGATGCAATCTGCGG TGCGACGCTTCATTACTCCCATTGGATATCTCTCATAGCCTATTTAGATGTCATTGGCGTACTCAAAGATATCAG CGCCGTTTCTGAAATCACAGCTCGAACGACAAATCGATCTGTGAGTAGGTTGGTCTTCAGTATAAGGCGTAAACA CTGAAAAGGGAACAGTTCCAAAAACGAGAACTTACTCTAGTTGACAAGAGCGGTTGCTCAATACAATTAACATTA TGGGGTAAACAGGCAGAGTCGTTCACGGGTGAACCGGGCTCCATTGGTGCCTTCAAGGGCGTCAAAGTCGGTGAC TTTGGGGGTGAGTTATCAACCTCTCGAGCAAATATGTATCGCTCATTTAATCAGGTGTTTCATTATCCACGACGC CCTCGACTCATATACAACTGGATCCTCACATCCAGGATTGTTACACCCTTCGCGGCTGGTGGGACTCTCAAGGCT CCGACATGTCTTTCCAATCCAAAACTGTTATTGGAGGTGGTGGTGGTCTCGGAATTGCTTTCAACCGTGCCCAAG TTCGTAGTCTGAACGAAATCAAAGAAGCCGAGGTGGGCATGGGAGATAAGGCCGATACATTCTGTTGTCAAGGAA CAATCGTTCATATCAGAGACCAAAACCTTCTTTACCCTGCCTGCCCAGGTAACAATTGTAACAAGAAAATGAGTA TGTCGGGTGATACTTGGGTGTGTGATAAATGTGGTACGAACGCGGAGACGCCTGAATATAGGTAAGCACTACTTC TCAACACATCTCAGGAGTGGATACTCATGAAATGAATAGATATATTCTTTCTATGGCTGTTGCCGACTGGTCTGG CCAGGCATGGCTCCAGGGATTTAATGAAGCCGCAGTGATAGTTTTCGGTATGAGCGGAAATGAGCTCTACGATTT GAAGGTATGAGTCATCTCGTATAGGATTGATTACCTTGGACGAACTCATCGTGATGCACAGATGCGGGATGAAGA CAAATATAACGCCGTCATTCACAAGGCCCATTGCCAAACATATAATTTCGCATGTCGCGCCAAGAAAGATTCATA TGAAGTGCGCAAAGATATTTACTCCTTTAAAGCGAGAGTCCTGACTTCTTTTCCCCTCCCAATAGGATCGCGTTC GTATTCGATATGGTATTTCTCGGATAGAGAAAGTCGATTATCATGCAGAAACCCAATATCTACGAGACTTGCTTC GTAGTCCTTGGGCTGCATAG