Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|103670
Gene name
Locationscaffold_07:1551300..1552583
Strand-
Gene length (bp)1283
Transcript length (bp)798
Coding sequence length (bp)798
Protein length (aa) 266

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00657 Lipase_GDSL GDSL-like Lipase/Acylhydrolase 8.2E-11 47 256

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q99289|HLT_VIBPA Thermolabile hemolysin OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) GN=VPA0226 PE=1 SV=2 26 258 6.0E-06

GO

GO Term Description Terminal node
GO:0016788 hydrolase activity, acting on ester bonds Yes
GO:0003674 molecular_function No
GO:0016787 hydrolase activity No
GO:0003824 catalytic activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|103670
MGWATKLDFTPEQLLSNAILPNKTSSGGANWIEHLTGCYEGLPTHCHPQLWNFAHGGADISASILPRRLITTVQI
GDQVQQWLDYAADILPRPHGKTLTVWWVGINDCADITRNATITDVDAFIDADLEAYFGLVETTARNKLHAHLFLN
VPPIDLSPFGKTFTTGPESLRKTIHKFNKKFAARAAKYAKDNPDQVVLTFDAASVFEDVLSHPAKFGFKDTTHFC
EFCAAPDREGLFWNNDEHPSEPVHRILAEAVEEYLRRVDL*
Coding >Agabi119p4|103670
ATGGGTTGGGCTACAAAACTAGATTTCACGCCCGAGCAACTCCTTTCCAATGCGATTCTTCCCAATAAGACCAGT
TCAGGTGGAGCAAATTGGATTGAGCACCTTACCGGATGTTACGAGGGCCTGCCAACTCACTGTCATCCGCAGTTG
TGGAATTTTGCGCATGGAGGAGCTGATATAAGTGCATCAATATTACCACGCCGTCTAATAACTACGGTTCAAATT
GGGGATCAAGTCCAGCAATGGCTTGATTATGCCGCCGATATCCTTCCCCGGCCACATGGAAAGACCCTAACCGTC
TGGTGGGTAGGAATCAACGACTGCGCTGATATAACCAGAAATGCCACTATCACAGATGTAGACGCGTTTATCGAT
GCTGATCTGGAAGCTTACTTCGGTCTCGTGGAAACCACCGCTCGCAATAAACTCCACGCGCACTTGTTCCTTAAT
GTTCCTCCAATCGATTTATCCCCCTTTGGAAAAACATTCACCACTGGACCGGAAAGTCTGAGAAAGACCATTCAC
AAGTTCAATAAAAAATTCGCCGCCCGTGCTGCTAAATACGCGAAGGATAATCCAGATCAAGTGGTATTGACATTT
GATGCTGCCTCTGTTTTCGAAGATGTTCTGTCTCATCCAGCCAAATTTGGTTTCAAGGATACTACCCACTTTTGC
GAGTTTTGCGCAGCTCCCGATCGAGAGGGTTTGTTCTGGAACAACGACGAGCATCCAAGCGAGCCTGTACATAGA
ATATTGGCAGAAGCCGTTGAGGAGTATTTGAGAAGAGTGGATCTGTAA
Transcript >Agabi119p4|103670
ATGGGTTGGGCTACAAAACTAGATTTCACGCCCGAGCAACTCCTTTCCAATGCGATTCTTCCCAATAAGACCAGT
TCAGGTGGAGCAAATTGGATTGAGCACCTTACCGGATGTTACGAGGGCCTGCCAACTCACTGTCATCCGCAGTTG
TGGAATTTTGCGCATGGAGGAGCTGATATAAGTGCATCAATATTACCACGCCGTCTAATAACTACGGTTCAAATT
GGGGATCAAGTCCAGCAATGGCTTGATTATGCCGCCGATATCCTTCCCCGGCCACATGGAAAGACCCTAACCGTC
TGGTGGGTAGGAATCAACGACTGCGCTGATATAACCAGAAATGCCACTATCACAGATGTAGACGCGTTTATCGAT
GCTGATCTGGAAGCTTACTTCGGTCTCGTGGAAACCACCGCTCGCAATAAACTCCACGCGCACTTGTTCCTTAAT
GTTCCTCCAATCGATTTATCCCCCTTTGGAAAAACATTCACCACTGGACCGGAAAGTCTGAGAAAGACCATTCAC
AAGTTCAATAAAAAATTCGCCGCCCGTGCTGCTAAATACGCGAAGGATAATCCAGATCAAGTGGTATTGACATTT
GATGCTGCCTCTGTTTTCGAAGATGTTCTGTCTCATCCAGCCAAATTTGGTTTCAAGGATACTACCCACTTTTGC
GAGTTTTGCGCAGCTCCCGATCGAGAGGGTTTGTTCTGGAACAACGACGAGCATCCAAGCGAGCCTGTACATAGA
ATATTGGCAGAAGCCGTTGAGGAGTATTTGAGAAGAGTGGATCTGTAA
Gene >Agabi119p4|103670
ATGGGTTGGGCTACAAAACTAGATTTCACGCCCGAGCAACTCCTTTCCAATGCGATTCTTCCCAATAAGGTATGA
GAAAAATGATCTCCATGCCTGGTACAATCATAATGACACTAGTGTAGACCAGTTCAGGTGGAGCAAATTGGGTGA
GCATCATCGGAGACCCCTTCTTGTATTATCTGATGCCCCCATAGATTGAGCACCTTACCGGATGTTACGAGGGCC
TGCCAACTCACTGTCATCCGCAGTTGTGGAATTTTGCGCATGGAGGAGCTGATATAAGTGCATCAATGTATGCCT
CGCCTCATAGGCCCATACCTTTCTCTCATCATCGATTCTTCGATGTGATAGATTACCACGCCGTCTAATAACTAC
GGTTCAAATTGGGGATCAAGTCCAGCAATGGCTTGATTATGCCGCCGATATCCTTCCCCGGCCACATGGAAAGAC
CCTAACCGTCTGGTGGGTAGGAATCAACGACTGCGCTGATATAACCAGAAATGCCACTGTTCGTTTCAGCTTCAA
TACTCATATCAGGTTTTTTTTCGAGGTAACAAACATTCTTGTTTAGATCACAGATGTAGACGCGTTTATCGATGC
TGATCTGGAAGCTTACTTCGGTCTCGTGGTATGTGTTTTTTCCTTCTCGTTTTCAACATCCACCCTCTGACACAT
GTTATTCATTGATCTCTTTATCATTGTCCTAGGAAACCACCGCTCGCAATAAACTCCACGCGCACTTGTTCCTTA
ATGTTCCTCCAATCGATTTATCCCCCTTTGGAAAAACATTCACCACTGGACCGGAAAGTCTGAGAAAGACCATTC
ACAAGTTCAATAAAAAATTCGCCGCCCGTGCTGCTAAATACGCGAAGGATAATCCAGGTACTTTCGACCGATGCC
GTCGGCCGAACCAGTGAATTTTATATTGACCACACGGTACTTGTAGATCAAGTGGTATTGACATTTGATGCTGCC
TCTGTTTTCGAAGATGTTCTGTCTCATCCAGCCAAATTTGGTTTCAAGGATACTACCCAGTATGTCCCTAATCTC
GTGTATCAAGATGGTATCTGTGTATACTGATTTTTTGAATTTACTAGCTTTTGCGAGTTTTGCGCAGCTCCCGAT
CGAGAGGGTTTGTTCTGGAACAGTGGGTCGATTTTATTTGCTCCGGCGTAAAACAATCTCATGTGGGGAACATTC
TAGACGACGAGCATCCAAGCGAGCCTGTACATAGAATATTGGCAGAAGCCGTTGAGGAGTATTTGAGAAGAGTGG
ATCTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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