Fungal Genomics

General Properties

Protein ID	Agabi119p4|103640
Gene name
Location	scaffold_07:1539026..1540204
Strand	+
Gene length (bp)	1178
Transcript length (bp)	1122
Coding sequence length (bp)	1122
Protein length (aa)	374

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF12937	F-box-like	F-box-like	2.4E-07	64	126

Swissprot hits

(None)

GO

GO Term	Description	Terminal node
GO:0005515	protein binding	Yes
GO:0003674	molecular_function	No
GO:0005488	binding	No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

Domain #	Start	End	Length
1	140	162	22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID	5
Orthogroup	6763
Change Orthofinder run	5: Agaricus - all strains

Species	Protein ID
Agaricus bisporus var bisporus H39	AgabiH39|103640
Agaricus bisporus var bisporus H97	AgabiH97|103640
Agaricus bisporus var burnettii H119p4	Agabi119p4|103640 (this protein)

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Agabi119p4|103640 MNCYACGQRVSPESSFQDISAAEEVSSILRTTEHLGDLILSLNAARVKLLQRLNQLRASTRVCPPEILSTIFQHA SPPTDLTALEFLEEDEDGSVSESHRQVTLSAVSWHWRQVIFATPQLWTNAVVNVTRKNAERKAQLLQLYLTNVGN MTISLALYVFPGYGRLILKSELDPVINCIWNGAQKFKLLSLCSIPQSFISFSPADFTQLEDLRLKWTWDDLSGFH TTQISAFPRLRQLYLWGALIHLPSQPLCQSLTILRFFDTPLHISIQMLILCPNLVEYTCHQTSIDITETIPQVSE PITFPHMKIFYSPCSADALIAPILHKFKFPALEALGLELGPNKDGLEELVSFIRNTRSDFSISSPSSSVPSSA*
Coding	>Agabi119p4|103640 ATGAATTGCTACGCCTGCGGACAACGCGTGTCGCCCGAGTCTTCATTCCAGGACATTTCTGCAGCTGAAGAAGTG TCCTCTATCCTCAGAACAACGGAGCATCTAGGGGACCTCATCTTGTCTCTTAATGCCGCCCGCGTAAAGCTTCTA CAGCGCCTCAACCAACTCCGTGCATCCACCAGGGTCTGCCCACCAGAAATCCTCTCCACCATCTTTCAACATGCA TCCCCACCCACAGATCTCACCGCGTTGGAATTTCTGGAAGAGGACGAAGACGGCAGCGTATCTGAATCACATAGA CAGGTAACCTTAAGCGCCGTGTCTTGGCACTGGCGTCAAGTCATCTTCGCGACACCTCAGCTGTGGACGAATGCG GTTGTCAACGTCACGCGTAAAAATGCAGAAAGAAAGGCCCAGCTGCTTCAACTCTACCTTACAAACGTCGGAAAC ATGACTATTTCCCTCGCCCTCTATGTATTTCCAGGCTATGGGCGATTGATCTTAAAGTCGGAGCTCGACCCGGTA ATCAACTGTATTTGGAACGGAGCACAGAAATTCAAACTATTAAGCTTGTGCTCCATACCGCAGAGCTTTATCTCA TTTTCACCGGCTGATTTCACTCAACTAGAGGATCTACGGTTGAAATGGACTTGGGACGATTTATCCGGTTTTCAT ACAACTCAGATATCTGCTTTCCCTCGTCTTCGCCAGCTATATCTATGGGGCGCTCTCATACATCTCCCTTCTCAA CCCCTGTGTCAAAGTCTCACCATCCTCCGTTTCTTTGACACCCCCCTACATATCTCTATCCAGATGCTCATCCTA TGCCCAAATCTCGTTGAATATACATGTCATCAAACCTCAATCGACATTACTGAAACCATTCCTCAGGTTTCCGAA CCCATTACTTTTCCTCATATGAAAATCTTCTATTCCCCCTGTTCCGCTGATGCGCTTATCGCTCCTATCCTGCAC AAATTCAAATTCCCTGCGCTTGAGGCTCTAGGTCTGGAGCTTGGTCCCAATAAAGATGGCTTGGAAGAACTCGTA TCTTTCATAAGAAACACTCGAAGCGATTTTTCGATCTCTTCCCCGTCAAGTTCGGTCCCTTCATCTGCCTGA
Transcript	>Agabi119p4|103640 ATGAATTGCTACGCCTGCGGACAACGCGTGTCGCCCGAGTCTTCATTCCAGGACATTTCTGCAGCTGAAGAAGTG TCCTCTATCCTCAGAACAACGGAGCATCTAGGGGACCTCATCTTGTCTCTTAATGCCGCCCGCGTAAAGCTTCTA CAGCGCCTCAACCAACTCCGTGCATCCACCAGGGTCTGCCCACCAGAAATCCTCTCCACCATCTTTCAACATGCA TCCCCACCCACAGATCTCACCGCGTTGGAATTTCTGGAAGAGGACGAAGACGGCAGCGTATCTGAATCACATAGA CAGGTAACCTTAAGCGCCGTGTCTTGGCACTGGCGTCAAGTCATCTTCGCGACACCTCAGCTGTGGACGAATGCG GTTGTCAACGTCACGCGTAAAAATGCAGAAAGAAAGGCCCAGCTGCTTCAACTCTACCTTACAAACGTCGGAAAC ATGACTATTTCCCTCGCCCTCTATGTATTTCCAGGCTATGGGCGATTGATCTTAAAGTCGGAGCTCGACCCGGTA ATCAACTGTATTTGGAACGGAGCACAGAAATTCAAACTATTAAGCTTGTGCTCCATACCGCAGAGCTTTATCTCA TTTTCACCGGCTGATTTCACTCAACTAGAGGATCTACGGTTGAAATGGACTTGGGACGATTTATCCGGTTTTCAT ACAACTCAGATATCTGCTTTCCCTCGTCTTCGCCAGCTATATCTATGGGGCGCTCTCATACATCTCCCTTCTCAA CCCCTGTGTCAAAGTCTCACCATCCTCCGTTTCTTTGACACCCCCCTACATATCTCTATCCAGATGCTCATCCTA TGCCCAAATCTCGTTGAATATACATGTCATCAAACCTCAATCGACATTACTGAAACCATTCCTCAGGTTTCCGAA CCCATTACTTTTCCTCATATGAAAATCTTCTATTCCCCCTGTTCCGCTGATGCGCTTATCGCTCCTATCCTGCAC AAATTCAAATTCCCTGCGCTTGAGGCTCTAGGTCTGGAGCTTGGTCCCAATAAAGATGGCTTGGAAGAACTCGTA TCTTTCATAAGAAACACTCGAAGCGATTTTTCGATCTCTTCCCCGTCAAGTTCGGTCCCTTCATCTGCCTGA
Gene	>Agabi119p4|103640 ATGAATTGCTACGCCTGCGGACAACGCGTGTCGCCCGAGTCTTCATTCCAGGACATTTCTGCAGCTGAAGAAGTG TCCTCTATCCTCAGAACAACGGAGCATCTAGGGGACCTCATCTTGTCTCTTAATGCCGCCCGCGTAAAGCTTCTA CAGCGCCTCAACCAACTCCGTGCATCCACCAGGGTCTGCCCACCAGAAATCCTCTCCACCATCTTTCAACATGCA TCCCCACCCACAGATCTCACCGCGTTGGAATTTCTGGAAGAGGACGAAGACGGCAGCGTATCTGAATCACATAGA CAGGTAACCTTAAGCGCCGTGTCTTGGCACTGGCGTCAAGTCATCTTCGCGACACCTCAGCTGTGGACGAATGCG GTTGTCAACGTCACGCGTAAAAATGCAGAAAGAAAGGCCCAGCTGCTTCAACTCTACCTTACAAACGTCGGAAAC ATGACTATTTCCCTCGCCCTCTATGTATTTCCAGGCTATGGGCGATTGATCTTAAAGTCGGAGCTCGACCCGGTA ATCAACTGTATTTGGAACGGAGCACAGAAATTCAAACTATTAAGCTTGTGCTCCATACCGCAGAGCTTTATCTCA TTTTCACCGGCTGATTTCACTCAACTAGAGGATCTACGGTTGAAATGGACTTGGGACGATTTATCCGGTTTTCAT ACAACTCAGATATCTGCTTTCCCTCGTCTTCGCCAGCTATATCTATGGGGCGCTCTCATACATCTCCCTTCTCAA CCCCTGTGTCAAAGTCTCACCATCCTCCGTTTCTTTGACACCCCCCTACATATCTCTATCCAGATGCTCATCCTA TGCCCAAATCTCGTTGAATATACATGTCATCAAACCTCAATCGACATTACTGAAACCATTCCTCAGGTTTCCGAA CCCATTACTTTTCCTCATATGAAAATCTTCTATTCCCCCTGTTCCGCTGATGCGCTTATCGCTCCTATCCTGCAC AAATTCAAATTCCCTGCGCTTGAGGCTCTAGGTCTGGAGCTTGGTCCCAATAAAGATGGCTTGGAAGAACTCGTA TCTTTCATAGTTCGTTTACCTATTTCATGGTCAATCCTTGAAATTAATGGGTACAGCTACTCCAGAGAAACACTC GAAGCGATTTTTCGATCTCTTCCCCGTCAAGTTCGGTCCCTTCATCTGCCTGA