Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|102760
Gene name
Locationscaffold_07:1333792..1334184
Strand-
Gene length (bp)392
Transcript length (bp)285
Coding sequence length (bp)285
Protein length (aa) 95

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF09495 DUF2462 Protein of unknown function (DUF2462) 7.2E-21 1 77

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P0CS20|U390_CRYNJ UPF0390 protein CND04920 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=CND04920 PE=3 SV=1 1 77 1.0E-13
sp|P0CS21|U390_CRYNB UPF0390 protein CNBD1430 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=CNBD1430 PE=3 SV=1 1 77 1.0E-13

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 43 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|102760
MAQGKTKGLQSKAPSARHAHKAAANTKKGKRAVPPKKVALIKQAQMHKTLSSKINKSIEQQMVSAASAGKLTIMK
NTIAPEASSSSTKDKKTTK*
Coding >Agabi119p4|102760
ATGGCACAAGGGAAGACAAAAGGCCTACAGTCCAAGGCTCCTTCCGCACGACATGCACACAAGGCTGCTGCAAAT
ACCAAGAAGGGTAAAAGGGCTGTACCACCCAAGAAGGTAGCTCTCATCAAACAAGCACAAATGCACAAAACTCTG
AGCTCTAAAATAAATAAATCGATCGAGCAACAAATGGTCTCTGCGGCCTCTGCTGGCAAGCTTACGATTATGAAA
AATACTATCGCTCCAGAGGCATCTTCCTCATCCACGAAAGATAAGAAAACCACAAAATAA
Transcript >Agabi119p4|102760
ATGGCACAAGGGAAGACAAAAGGCCTACAGTCCAAGGCTCCTTCCGCACGACATGCACACAAGGCTGCTGCAAAT
ACCAAGAAGGGTAAAAGGGCTGTACCACCCAAGAAGGTAGCTCTCATCAAACAAGCACAAATGCACAAAACTCTG
AGCTCTAAAATAAATAAATCGATCGAGCAACAAATGGTCTCTGCGGCCTCTGCTGGCAAGCTTACGATTATGAAA
AATACTATCGCTCCAGAGGCATCTTCCTCATCCACGAAAGATAAGAAAACCACAAAATAA
Gene >Agabi119p4|102760
ATGGCACAAGGGAAGACAAAAGGCCTACAGTCCAAGGCTCCTTCCGCACGACATGCACACAAGGCTGCTGCAAAT
ACCAAGAAGGGTAAAAGGGCTGTACCACCCAAGAAGGTAGCTCTCATCAAACAAGCACAAATGCACAAAGTGTGT
CATATCTTCTCGACTCTCGTCTACCAATATTCATTCCAATCTCTAGACTCTGAGCTCTAAAATAAATAAATCGAT
CGAGCAACAAATGGTCTCTGCGGCCTCTGCTGGCAAGCTTACGATTATGAAAAATACTATCGCTCCAGAGGCGTG
AGTACTCGAACGATTCCCAGAGCTAATCCGTTAATTCTTCGACATAAATTAGATCTTCCTCATCCACGAAAGATA
AGAAAACCACAAAATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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