Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|102480
Gene name
Locationscaffold_07:1249967..1252441
Strand-
Gene length (bp)2474
Transcript length (bp)2064
Coding sequence length (bp)2064
Protein length (aa) 688

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03935 SKN1_KRE6_Sbg1 Beta-glucan synthesis-associated protein SKN1/KRE6/Sbg1 2.1E-197 176 687

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|O13941|YEPB_SCHPO Uncharacterized beta-glucan synthesis-associated protein C23H3.11c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC23H3.11c PE=3 SV=1 166 687 7.0E-130
sp|P32486|KRE6_YEAST Beta-glucan synthesis-associated protein KRE6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=KRE6 PE=1 SV=2 171 687 5.0E-125
sp|P33336|SKN1_YEAST Beta-glucan synthesis-associated protein SKN1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SKN1 PE=1 SV=1 262 687 5.0E-124
sp|P87023|KRE6_CANAX Beta-glucan synthesis-associated protein KRE6 OS=Candida albicans GN=KRE6 PE=2 SV=1 171 687 1.0E-112
sp|O13789|YEOB_SCHPO Uncharacterized beta-glucan synthesis-associated protein C17G6.11c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC17G6.11c PE=3 SV=1 176 687 2.0E-111
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|O13941|YEPB_SCHPO Uncharacterized beta-glucan synthesis-associated protein C23H3.11c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC23H3.11c PE=3 SV=1 166 687 7.0E-130
sp|P32486|KRE6_YEAST Beta-glucan synthesis-associated protein KRE6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=KRE6 PE=1 SV=2 171 687 5.0E-125
sp|P33336|SKN1_YEAST Beta-glucan synthesis-associated protein SKN1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SKN1 PE=1 SV=1 262 687 5.0E-124
sp|P87023|KRE6_CANAX Beta-glucan synthesis-associated protein KRE6 OS=Candida albicans GN=KRE6 PE=2 SV=1 171 687 1.0E-112
sp|O13789|YEOB_SCHPO Uncharacterized beta-glucan synthesis-associated protein C17G6.11c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC17G6.11c PE=3 SV=1 176 687 2.0E-111
sp|P87024|SKN1_CANAX Beta-glucan synthesis-associated protein SKN1 OS=Candida albicans GN=SKN1 PE=2 SV=1 172 687 9.0E-110
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

Domain # Start End Length
1 207 229 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|102480
MSRPHRRLARKEQAPQPLQYAAVPQTSPSRHTSQQHQQQHQHQHHSHPQMQPSHPYQQPSLHYQQSPAQSHQQPQ
YTSQVGGPRAPPAQSGRSNSRPSGRAKIAMGVASGTIGAGYGPYSYNPNHARDAGVYTNSRFSNGQSDASIATSS
PTHEKEPIRLPVTPPPQNTQSIPLYLYDKDPDLDDALHDPRPDPAFASWTIFSVRGWINSVTLVAIVVALVTLFV
GYPVVLHFTNPPPLNQGFNVGGINGSGQIPDLQIPPLIDSDTPSSAYTRTGNDGKKYNLVFSDEFEVDGRSFYPG
DDAYWEAVDFHYWPTGDEEWYDPGTITTSNGKLVITMTEKRSHNLNFESGMLTTWNKFCFNTGYIEVSVSLPGTP
KAPGLWPGVWTMGNLGRAGYGATTDGMWPYSYDTCDLGTFPIQTARDGTPEAAATGSRDGGQLSGLPGQKLSACT
CPGSDHPGPNVETGRGAPEIDIIEAQVDVDRFVGEVSQSFQVAPFNIRYQFDNATSATTIYNNDITHINTYLGGP
LQQAVSAVSDVEDKFYNNNDYSKYGYEWWYDSDRRQDGFITWYNNGEPSWTITSASIGPDPTSQVSQRLISEEPM
YIIMNLGIAPGFQKQDYKHLQFPAKMYIDYVRVYQRDGVKNGVTCNPPHRPTSDYIQKHVNAYNNANLTTWALAN
NTFPRNRLYDGC*
Coding >Agabi119p4|102480
ATGTCCCGCCCCCACCGCCGTCTCGCTCGCAAAGAGCAGGCGCCACAACCGCTTCAGTATGCAGCCGTCCCTCAG
ACAAGTCCGAGCCGTCATACAAGCCAACAGCACCAGCAACAGCACCAGCACCAGCACCATTCCCATCCCCAGATG
CAGCCCTCACATCCATATCAGCAGCCTTCATTACACTATCAGCAGTCGCCTGCCCAAAGCCATCAGCAGCCGCAA
TATACATCTCAAGTAGGTGGTCCAAGGGCACCGCCGGCACAGTCGGGTCGGAGCAACAGCAGGCCATCAGGGAGA
GCGAAAATCGCCATGGGTGTTGCGAGTGGGACCATTGGTGCGGGTTATGGACCTTATTCATATAACCCAAACCAT
GCGCGTGACGCGGGAGTCTACACAAATTCTCGATTCAGTAATGGGCAGTCCGACGCTTCAATAGCCACCTCCAGT
CCGACTCACGAAAAAGAACCCATCCGGTTGCCAGTAACACCACCACCACAAAACACTCAGTCAATTCCACTTTAT
CTGTACGACAAAGATCCCGATCTCGATGATGCGCTACATGATCCTCGCCCCGACCCAGCTTTCGCGTCATGGACC
ATTTTTTCAGTGAGAGGATGGATCAACTCAGTTACGCTCGTGGCAATCGTGGTCGCGTTGGTTACCCTTTTTGTT
GGATATCCTGTCGTTTTACATTTCACAAATCCTCCGCCTCTAAATCAAGGGTTCAATGTAGGCGGCATCAACGGC
TCAGGACAGATTCCTGACCTCCAGATACCTCCACTCATAGACAGTGACACCCCTTCAAGCGCATATACTCGCACT
GGAAATGACGGAAAGAAGTACAATCTCGTTTTTAGCGATGAATTCGAAGTGGATGGAAGGTCATTTTACCCAGGT
GATGATGCATATTGGGAAGCCGTCGATTTCCATTACTGGCCGACAGGTGACGAGGAGTGGTATGATCCCGGTACG
ATAACGACCAGTAACGGAAAACTAGTCATAACAATGACGGAGAAGAGGAGCCATAATTTGAATTTTGAAAGCGGT
ATGCTAACGACGTGGAATAAGTTTTGCTTCAATACTGGATATATTGAGGTTTCTGTCAGTTTGCCCGGTACGCCC
AAAGCACCAGGCCTGTGGCCAGGCGTTTGGACTATGGGAAATCTAGGACGAGCTGGTTATGGTGCTACAACTGAT
GGAATGTGGCCATATAGTTACGACACTTGCGACTTGGGCACGTTTCCCATCCAGACGGCGCGCGATGGTACTCCT
GAGGCTGCAGCTACTGGCTCCCGTGATGGAGGTCAATTGAGTGGCCTTCCTGGACAAAAACTCTCGGCATGTACT
TGCCCTGGCTCAGATCATCCTGGGCCCAATGTCGAGACAGGTCGAGGTGCACCGGAAATCGACATCATTGAGGCA
CAGGTTGACGTCGATAGGTTTGTCGGCGAGGTGTCGCAGAGCTTCCAAGTCGCTCCTTTCAACATTCGATATCAA
TTTGACAATGCGACATCGGCTACCACGATCTACAACAACGACATCACCCATATCAATACCTACCTAGGAGGCCCA
CTACAGCAAGCCGTCTCAGCTGTGTCGGATGTTGAAGACAAATTCTATAATAACAACGATTACTCCAAATATGGT
TACGAATGGTGGTACGACTCGGACCGGAGACAGGACGGCTTCATTACTTGGTATAACAATGGTGAACCCAGCTGG
ACGATAACGTCTGCTTCAATCGGGCCAGATCCAACTTCTCAGGTCTCACAGCGGTTGATATCAGAGGAACCAATG
TATATCATCATGAACTTGGGCATTGCGCCGGGTTTCCAAAAACAAGATTACAAGCATCTGCAGTTTCCGGCAAAG
ATGTATATCGACTACGTGCGCGTCTACCAACGTGATGGTGTCAAGAACGGTGTTACGTGTAACCCTCCGCACCGA
CCCACTAGTGATTACATTCAAAAACATGTAAATGCGTACAATAATGCTAACCTCACTACCTGGGCTCTGGCAAAC
AATACGTTCCCGCGCAATCGCCTTTATGACGGCTGTTGA
Transcript >Agabi119p4|102480
ATGTCCCGCCCCCACCGCCGTCTCGCTCGCAAAGAGCAGGCGCCACAACCGCTTCAGTATGCAGCCGTCCCTCAG
ACAAGTCCGAGCCGTCATACAAGCCAACAGCACCAGCAACAGCACCAGCACCAGCACCATTCCCATCCCCAGATG
CAGCCCTCACATCCATATCAGCAGCCTTCATTACACTATCAGCAGTCGCCTGCCCAAAGCCATCAGCAGCCGCAA
TATACATCTCAAGTAGGTGGTCCAAGGGCACCGCCGGCACAGTCGGGTCGGAGCAACAGCAGGCCATCAGGGAGA
GCGAAAATCGCCATGGGTGTTGCGAGTGGGACCATTGGTGCGGGTTATGGACCTTATTCATATAACCCAAACCAT
GCGCGTGACGCGGGAGTCTACACAAATTCTCGATTCAGTAATGGGCAGTCCGACGCTTCAATAGCCACCTCCAGT
CCGACTCACGAAAAAGAACCCATCCGGTTGCCAGTAACACCACCACCACAAAACACTCAGTCAATTCCACTTTAT
CTGTACGACAAAGATCCCGATCTCGATGATGCGCTACATGATCCTCGCCCCGACCCAGCTTTCGCGTCATGGACC
ATTTTTTCAGTGAGAGGATGGATCAACTCAGTTACGCTCGTGGCAATCGTGGTCGCGTTGGTTACCCTTTTTGTT
GGATATCCTGTCGTTTTACATTTCACAAATCCTCCGCCTCTAAATCAAGGGTTCAATGTAGGCGGCATCAACGGC
TCAGGACAGATTCCTGACCTCCAGATACCTCCACTCATAGACAGTGACACCCCTTCAAGCGCATATACTCGCACT
GGAAATGACGGAAAGAAGTACAATCTCGTTTTTAGCGATGAATTCGAAGTGGATGGAAGGTCATTTTACCCAGGT
GATGATGCATATTGGGAAGCCGTCGATTTCCATTACTGGCCGACAGGTGACGAGGAGTGGTATGATCCCGGTACG
ATAACGACCAGTAACGGAAAACTAGTCATAACAATGACGGAGAAGAGGAGCCATAATTTGAATTTTGAAAGCGGT
ATGCTAACGACGTGGAATAAGTTTTGCTTCAATACTGGATATATTGAGGTTTCTGTCAGTTTGCCCGGTACGCCC
AAAGCACCAGGCCTGTGGCCAGGCGTTTGGACTATGGGAAATCTAGGACGAGCTGGTTATGGTGCTACAACTGAT
GGAATGTGGCCATATAGTTACGACACTTGCGACTTGGGCACGTTTCCCATCCAGACGGCGCGCGATGGTACTCCT
GAGGCTGCAGCTACTGGCTCCCGTGATGGAGGTCAATTGAGTGGCCTTCCTGGACAAAAACTCTCGGCATGTACT
TGCCCTGGCTCAGATCATCCTGGGCCCAATGTCGAGACAGGTCGAGGTGCACCGGAAATCGACATCATTGAGGCA
CAGGTTGACGTCGATAGGTTTGTCGGCGAGGTGTCGCAGAGCTTCCAAGTCGCTCCTTTCAACATTCGATATCAA
TTTGACAATGCGACATCGGCTACCACGATCTACAACAACGACATCACCCATATCAATACCTACCTAGGAGGCCCA
CTACAGCAAGCCGTCTCAGCTGTGTCGGATGTTGAAGACAAATTCTATAATAACAACGATTACTCCAAATATGGT
TACGAATGGTGGTACGACTCGGACCGGAGACAGGACGGCTTCATTACTTGGTATAACAATGGTGAACCCAGCTGG
ACGATAACGTCTGCTTCAATCGGGCCAGATCCAACTTCTCAGGTCTCACAGCGGTTGATATCAGAGGAACCAATG
TATATCATCATGAACTTGGGCATTGCGCCGGGTTTCCAAAAACAAGATTACAAGCATCTGCAGTTTCCGGCAAAG
ATGTATATCGACTACGTGCGCGTCTACCAACGTGATGGTGTCAAGAACGGTGTTACGTGTAACCCTCCGCACCGA
CCCACTAGTGATTACATTCAAAAACATGTAAATGCGTACAATAATGCTAACCTCACTACCTGGGCTCTGGCAAAC
AATACGTTCCCGCGCAATCGCCTTTATGACGGCTGTTGA
Gene >Agabi119p4|102480
ATGTCCCGCCCCCACCGCCGTCTCGCTCGCAAAGAGCAGGCGCCACAACCGCTTCAGTATGCAGCCGTCCCTCAG
ACAAGTCCGAGCCGTCATACAAGCCAACAGCACCAGCAACAGCACCAGCACCAGCACCATTCCCATCCCCAGATG
CAGCCCTCACATCCATATCAGCAGCCTTCATTACACTATCAGCAGTCGCCTGCCCAAAGCCATCAGCAGCCGCAA
TATACATCTCAAGTAGGTGGTCCAAGGGCACCGCCGGCACAGTCGGGTCGGAGCAACAGCAGGCCATCAGGGAGA
GCGAAAATCGCCATGGGTGTTGCGAGTGGGACCATTGGTGCGGGTTATGGACCTTATTCAGTGAGTGTTTCAGCA
GTTTCCCCCTCCACAAGACACTCATCACCCGATCCAAGTATAACCCAAACCATGCGCGTGACGCGGGAGTCTACA
CAAATTCTCGATTCAGTAATGGGCAGTCCGACGCTTCAATAGCCACCTCCAGTCCGACTCACGAAAAAGAACCCA
TCCGGTTGCCAGTAACACCACCACCACAAAACACTCAGTCAATTCCACTTTATCTGTACGACAAAGATCCCGATC
TCGATGATGCGCTACATGATCCTCGCCCCGACCCAGCTTTCGCGTCATGGACCATTTTTTCAGTGAGAGGATGGA
TCAACTCAGTTACGCTCGTGGCAATCGTGGTCGCGTTGGTTACCCTTTTTGTTGGATATCCTGTCGTTTTACATT
TCACAAATCCTCCGCCTCTAAATCAAGGGTTCAATGTAGGCGGCATCAACGGCTCAGGACAGATTCCTGACCTCC
AGATACCTCCACTCATAGACAGTGACACCCCTTCAAGCGCATATACTCGCACTGGAAATGACGGAAAGAAGTACA
ATCTCGTTTTTAGCGATGAATTCGAAGTGGATGGAAGGTCATTTTACCCAGGTGATGATGCATATTGGGAAGCCG
TCGATTTCCATTACTGGTGCGTCAATTCGTTTGCACGACGACGTCTTGTTCTCAAGTTAGACATAGGCCGACAGG
TGACGAGGAGTGGTATGATCCCGGTGTAAGTTCAGACGCCTTAAGTGTGTTTTATATTCTGAAAATGTCGTAGAC
GATAACGACCAGTAACGGAAAACTAGTCATAACAATGACGGAGAAGAGGAGCCATAATTTGAATTTTGAAAGCGG
TAATTTACCGATGGAATATGTGCAGAATAACAGTCTCACAGTTTCCCAGGTATGCTAACGACGTGGAATAAGTTT
TGCTTCAATACTGGATATATTGAGGTTTCTGTCAGTTTGCCCGGTACGCCCAAAGCACCAGGCCTGTGGCCAGGT
CAGTTATTTCTCTACTTTGTACATTCAATATCTGACTTGGTGTAGGCGTTTGGACTATGGGAAATCTAGTGCGTC
GACCGGCTTGTTCCCGATTTATCTATTTTGATCCATATAATAGGGACGAGCTGGTTATGGTGCTACAACTGATGG
AATGTGGCCATATAGTTACGACACTTGCGACTTGGGCACGTTTCCCATCCAGACGGCGCGCGATGGTACTCCTGA
GGCTGCAGCTACTGGCTCCCGTGATGGAGGTCAATTGAGTGGCCTTCCTGGACAAAAACTCTCGGCATGTACTTG
CCCTGGCTCAGATCATCCTGGGCCCAATGTCGAGACAGGTCGAGGTGCACCGGAAATCGACATCATTGAGGCACA
GGTTGACGTCGATAGGTTTGTCGGCGAGGTGTCGCAGAGCTTCCAAGTCGCTCCTTTCAACATTCGATATCAATT
TGACAATGCGACATCGGCTACCACGATCTACAACAACGACATCACCCATATCAATACCTACCTAGGAGGCCCACT
ACAGCAAGCCGTCTCAGCTGTGTCGGATGTTGAAGACAAATTCTATAATAACAACGATTACTCCAAATATGGTTA
CGAATGGTGGTACGACTCGGACCGGAGACAGGACGGCTTCATTACTTGGTATAACAATGGTGAACCCAGCTGGAC
GATAACGTCTGCTTCAATCGGGCCAGATCCAACTTCTCAGGTCTCACAGCGGTTGATATCAGAGGAACCAATGGT
GTGCATTTGGCTAGTATCCAGTTTTCCTGACCTAGAGACTTATCTTGAGCGCAGTATATCATCATGAACTTGGGC
ATTGCGCCGGGTTTCCAAAAACAAGATTACAAGCATCTGCAGTTTCCGGCAAAGATGTATATCGACTACGTGCGC
GTCTACCAACGTGATGGTGTCAAGAACGGTGTTACGTGTAACCCTCCGCACCGACCCACTAGTGATTACATTCAA
AAGTCAGCTCGTTGGTTCTCTATATCTCAATGTTTGATGCTGACGCTTGGACATATAGACATGTAAATGCGTACA
ATAATGCTAACCTCACTACCTGGGCTCTGGCAAACAATACGTTCCCGCGCAATCGCCTTTATGACGGCTGTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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