Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|102290
Gene name
Locationscaffold_07:1201544..1202890
Strand-
Gene length (bp)1346
Transcript length (bp)876
Coding sequence length (bp)876
Protein length (aa) 292

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00498 FHA FHA domain 1.1E-17 199 276

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q5M9G6|SNIP1_RAT Smad nuclear interacting protein 1 OS=Rattus norvegicus GN=Snip1 PE=1 SV=1 121 287 5.0E-52
sp|Q8TAD8|SNIP1_HUMAN Smad nuclear-interacting protein 1 OS=Homo sapiens GN=SNIP1 PE=1 SV=1 132 287 9.0E-52
sp|Q8BIZ6|SNIP1_MOUSE Smad nuclear-interacting protein 1 OS=Mus musculus GN=Snip1 PE=1 SV=1 132 287 1.0E-51
sp|Q8W4D8|DDL_ARATH FHA domain-containing protein DDL OS=Arabidopsis thaliana GN=DDL PE=1 SV=1 134 290 1.0E-46
sp|Q54VU4|Y8013_DICDI Probable serine/threonine-protein kinase DDB_G0280133 OS=Dictyostelium discoideum GN=DDB_G0280133 PE=3 SV=1 10 288 1.0E-35
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Swissprot ID Swissprot Description Start End E-value
sp|Q5M9G6|SNIP1_RAT Smad nuclear interacting protein 1 OS=Rattus norvegicus GN=Snip1 PE=1 SV=1 121 287 5.0E-52
sp|Q8TAD8|SNIP1_HUMAN Smad nuclear-interacting protein 1 OS=Homo sapiens GN=SNIP1 PE=1 SV=1 132 287 9.0E-52
sp|Q8BIZ6|SNIP1_MOUSE Smad nuclear-interacting protein 1 OS=Mus musculus GN=Snip1 PE=1 SV=1 132 287 1.0E-51
sp|Q8W4D8|DDL_ARATH FHA domain-containing protein DDL OS=Arabidopsis thaliana GN=DDL PE=1 SV=1 134 290 1.0E-46
sp|Q54VU4|Y8013_DICDI Probable serine/threonine-protein kinase DDB_G0280133 OS=Dictyostelium discoideum GN=DDB_G0280133 PE=3 SV=1 10 288 1.0E-35
sp|Q07930|PML1_YEAST Pre-mRNA leakage protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PML1 PE=1 SV=1 137 275 8.0E-14
sp|Q8R3G1|PP1R8_MOUSE Nuclear inhibitor of protein phosphatase 1 OS=Mus musculus GN=Ppp1r8 PE=1 SV=1 154 284 6.0E-13
sp|Q9BWU0|NADAP_HUMAN Kanadaptin OS=Homo sapiens GN=SLC4A1AP PE=1 SV=1 150 288 7.0E-13
sp|Q12972|PP1R8_HUMAN Nuclear inhibitor of protein phosphatase 1 OS=Homo sapiens GN=PPP1R8 PE=1 SV=2 154 284 7.0E-13
sp|Q28147|PP1R8_BOVIN Nuclear inhibitor of protein phosphatase 1 OS=Bos taurus GN=PPP1R8 PE=1 SV=1 154 284 8.0E-13
sp|Q9Y4F5|C170B_HUMAN Centrosomal protein of 170 kDa protein B OS=Homo sapiens GN=CEP170B PE=1 SV=4 176 284 1.0E-08
sp|Q80U49|C170B_MOUSE Centrosomal protein of 170 kDa protein B OS=Mus musculus GN=Cep170b PE=1 SV=2 176 284 1.0E-08
sp|Q498L0|C170B_XENLA Centrosomal protein of 170 kDa protein B OS=Xenopus laevis GN=cep170b PE=2 SV=1 176 284 3.0E-06
sp|A0JM08|C170B_XENTR Centrosomal protein of 170 kDa protein B OS=Xenopus tropicalis GN=cep170b PE=2 SV=1 176 284 6.0E-06
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GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0003674 molecular_function No
GO:0005488 binding No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID5
Orthogroup6655
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|102290
Agaricus bisporus var bisporus H97 AgabiH97|102290
Agaricus bisporus var burnettii H119p4 Agabi119p4|102290 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|102290
MYTRIFFETRIVNSMRDLALHEDVPRTSRNGQDRDRDRKSHSYSDKRREGGHDRIAESSSYGGSHRHRESQYERR
GYGEHDRERERQRDRERYDRDRDGRRDERPSRRRSASPRSRRSSRPRSSSRDRSPNPEKAKPNFNQSGLLAAETN
TVKATDGTSTVLKYNEPPEARKPTLSWRLYVFKGSEQVELLHIQRQSAYLIGRDRLVSDIAVDHPSCSKQHAAIQ
HRYIQDKGTSSGTVKPFVIDLESTNGTFVNDEKIPSARFYELKAGDVIKFGLSNREYVLLNEEAAS*
Coding >Agabi119p4|102290
ATGTATACCCGGATCTTTTTTGAAACACGGATTGTGAACTCCATGCGCGACCTGGCATTACATGAGGATGTACCT
CGTACTTCAAGAAACGGCCAAGACCGTGATCGAGATAGAAAATCTCATAGTTACAGCGACAAAAGAAGGGAGGGG
GGTCATGACCGTATAGCCGAGAGTTCTTCATATGGAGGTTCACACAGGCATCGGGAGTCACAGTATGAGCGCCGA
GGGTACGGGGAACATGACCGGGAACGAGAGCGACAAAGAGATAGGGAGCGCTATGATAGGGATAGAGATGGAAGG
CGTGATGAGCGGCCTTCACGAAGACGCTCGGCTTCGCCGAGATCACGCCGCTCCTCCAGGCCACGGTCATCCTCC
AGAGATCGTTCTCCCAATCCAGAGAAAGCGAAGCCCAATTTCAACCAGTCAGGACTACTAGCTGCAGAAACTAAT
ACCGTAAAGGCAACAGATGGAACCAGTACCGTCCTGAAATATAACGAACCACCGGAAGCTCGAAAACCTACTCTG
AGTTGGAGACTCTATGTTTTTAAAGGTAGTGAACAAGTAGAACTTCTTCATATTCAACGTCAGAGTGCATATCTG
ATTGGACGTGATCGGCTTGTCTCTGACATAGCCGTGGATCACCCCTCATGCTCGAAGCAGCATGCAGCCATTCAG
CATCGATATATCCAGGACAAAGGAACTTCTAGTGGTACTGTGAAGCCCTTCGTTATCGACCTAGAGTCGACGAAC
GGGACATTTGTCAATGATGAAAAGATACCGTCTGCACGTTTTTATGAACTGAAAGCTGGAGATGTCATCAAATTT
GGTCTTTCCAACCGGGAATATGTTTTATTAAACGAGGAAGCGGCTTCGTAA
Transcript >Agabi119p4|102290
ATGTATACCCGGATCTTTTTTGAAACACGGATTGTGAACTCCATGCGCGACCTGGCATTACATGAGGATGTACCT
CGTACTTCAAGAAACGGCCAAGACCGTGATCGAGATAGAAAATCTCATAGTTACAGCGACAAAAGAAGGGAGGGG
GGTCATGACCGTATAGCCGAGAGTTCTTCATATGGAGGTTCACACAGGCATCGGGAGTCACAGTATGAGCGCCGA
GGGTACGGGGAACATGACCGGGAACGAGAGCGACAAAGAGATAGGGAGCGCTATGATAGGGATAGAGATGGAAGG
CGTGATGAGCGGCCTTCACGAAGACGCTCGGCTTCGCCGAGATCACGCCGCTCCTCCAGGCCACGGTCATCCTCC
AGAGATCGTTCTCCCAATCCAGAGAAAGCGAAGCCCAATTTCAACCAGTCAGGACTACTAGCTGCAGAAACTAAT
ACCGTAAAGGCAACAGATGGAACCAGTACCGTCCTGAAATATAACGAACCACCGGAAGCTCGAAAACCTACTCTG
AGTTGGAGACTCTATGTTTTTAAAGGTAGTGAACAAGTAGAACTTCTTCATATTCAACGTCAGAGTGCATATCTG
ATTGGACGTGATCGGCTTGTCTCTGACATAGCCGTGGATCACCCCTCATGCTCGAAGCAGCATGCAGCCATTCAG
CATCGATATATCCAGGACAAAGGAACTTCTAGTGGTACTGTGAAGCCCTTCGTTATCGACCTAGAGTCGACGAAC
GGGACATTTGTCAATGATGAAAAGATACCGTCTGCACGTTTTTATGAACTGAAAGCTGGAGATGTCATCAAATTT
GGTCTTTCCAACCGGGAATATGTTTTATTAAACGAGGAAGCGGCTTCGTAA
Gene >Agabi119p4|102290
ATGTATACCCGGAGTGGCTGCCAAGGACATTTCGCCTACTTCCCGAATCCAGCCTATCATGAGTTTCATCCAGAT
TCCACTGAGTCCCACTCGAACTTGAAGCAGAACGCTAGGTTTCTCACGTGACAGCTTTAACAATTGAACTTCGAC
TTAACAGAGCTCAAACCAAGCTTACATAGTGCCAACTGAACACTTGTCAAGAATTCAACAGTCTTTTTTGAAACA
CGGATTGTGGTGCTCTTTTATATGCAGCTTTCACAACCCACGTATAAGTTGACATAGCTCAAACAGAACTCCATG
CGCGACCTGGCATTACATGAGGATGTACCTCGTACTTCAAGAAACGGCCAAGACCGTGATCGAGATAGAAAATCT
CATAGTTACAGCGACAAAAGAAGGGAGGGGGGTCATGACCGTATAGCCGAGAGTTCTTCATATGGAGGTTCACAC
AGGCATCGGGAGTCACAGTATGAGCGCCGAGGGTACGGGGAACATGACCGGGAACGAGAGCGACAAAGAGATAGG
GAGCGCTATGATAGGGATAGAGATGGAAGGCGTGATGAGCGGCCTTCACGAAGACGCTCGGCTTCGCCGAGATCA
CGCCGCTCCTCCAGGCCACGGTCATCCTCCAGAGATCGTTCTCCCAATCCAGAGAAAGCGAAGCCCAATTTCAAC
CAGTCAGGACTACTAGCTGCAGAAACTAATACCGTAAAGGCAACAGATGGAACCAGTACCGTCCTGAAATATAAC
GAACCACCGGAAGCTCGAAAACCTACTCTGAGTTGGAGACTCTATGTTTTTAAAGGTAGTGAACAAGTAGGTAAG
TCCCAAATTTCCTTTCCCACCTTACCTTCCACGAAATCTTTCCGTTATCAGAACTTCTTCATATTCAACGTCAGA
GTGCATATCTGATTGGACGTGATCGGCTTGTCTCTGACATAGCCGTGGATCACCCCTCATGCTCGAAGCAGCATG
CAGCCATTCAGCGTGAGTGTTGATTATCGGACAGGGCGTGACAAGTCATAAGACCCCTCCAGATCGATATATCCA
GGACAAAGGAACTTCTAGTGGTACTGTGAAGTACGCCAATCACTACGCCAACAAGCTTGATGCTAAATTCACCAT
CATGTTTTTTAGGCCCTTCGTTATCGACCTAGAGTCGACGAACGGGACATTTGTCAATGATGAAAAGATACCGTC
TGCACGTTTTTATGAACTGAAAGCTGGAGATGGTACGTCGATTCTAGTACTCGGAGCACCTGTCACTGATATTGT
CCGTTTTAGTCATCAAATTTGGTCTTTCCAACCGGGAATATGTTTTATTAAACGAGGAAGCGGCTTCGTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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