Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|102240
Gene name
Locationscaffold_07:1189830..1191494
Strand-
Gene length (bp)1664
Transcript length (bp)933
Coding sequence length (bp)933
Protein length (aa) 311

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04616 Glyco_hydro_43 Glycosyl hydrolases family 43 9.5E-44 28 307

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|B0XZW5|ABNA_ASPFC Probable arabinan endo-1,5-alpha-L-arabinosidase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) GN=abnA PE=3 SV=1 3 309 3.0E-67
sp|Q4WYX7|ABNA_ASPFU Probable arabinan endo-1,5-alpha-L-arabinosidase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=abnA PE=3 SV=1 3 309 3.0E-67
sp|A1CLG4|ABNA_ASPCL Probable arabinan endo-1,5-alpha-L-arabinosidase A OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=abnA PE=3 SV=1 3 309 2.0E-66
sp|P42256|ABNA_ASPNG Arabinan endo-1,5-alpha-L-arabinosidase A OS=Aspergillus niger GN=abnA PE=1 SV=1 1 309 6.0E-65
sp|A2QT85|ABNA_ASPNC Probable arabinan endo-1,5-alpha-L-arabinosidase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=abnA PE=3 SV=1 2 309 1.0E-64
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Swissprot ID Swissprot Description Start End E-value
sp|B0XZW5|ABNA_ASPFC Probable arabinan endo-1,5-alpha-L-arabinosidase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) GN=abnA PE=3 SV=1 3 309 3.0E-67
sp|Q4WYX7|ABNA_ASPFU Probable arabinan endo-1,5-alpha-L-arabinosidase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=abnA PE=3 SV=1 3 309 3.0E-67
sp|A1CLG4|ABNA_ASPCL Probable arabinan endo-1,5-alpha-L-arabinosidase A OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=abnA PE=3 SV=1 3 309 2.0E-66
sp|P42256|ABNA_ASPNG Arabinan endo-1,5-alpha-L-arabinosidase A OS=Aspergillus niger GN=abnA PE=1 SV=1 1 309 6.0E-65
sp|A2QT85|ABNA_ASPNC Probable arabinan endo-1,5-alpha-L-arabinosidase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=abnA PE=3 SV=1 2 309 1.0E-64
sp|A1D5W1|ABNA_NEOFI Probable arabinan endo-1,5-alpha-L-arabinosidase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=abnA PE=3 SV=1 3 309 5.0E-63
sp|Q2U8C6|ABNA_ASPOR Probable arabinan endo-1,5-alpha-L-arabinosidase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=abnA PE=3 SV=1 1 309 2.0E-62
sp|B8NDL1|ABNA_ASPFN Probable arabinan endo-1,5-alpha-L-arabinosidase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=abnA PE=3 SV=1 1 309 2.0E-62
sp|Q0CS14|ABNA_ASPTN Probable arabinan endo-1,5-alpha-L-arabinosidase A OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=abnA PE=3 SV=1 1 309 1.0E-61
sp|P94522|EABN1_BACSU Extracellular endo-alpha-(1->5)-L-arabinanase 1 OS=Bacillus subtilis (strain 168) GN=abnA PE=1 SV=3 28 307 1.0E-60
sp|Q9HFS9|ABNA_ASPAC Arabinan endo-1,5-alpha-L-arabinosidase A OS=Aspergillus aculeatus GN=abnA PE=1 SV=1 4 309 5.0E-60
sp|Q93HT9|IABN_GEOTD Intracellular endo-alpha-(1->5)-L-arabinanase OS=Geobacillus thermodenitrificans GN=abn-ts PE=1 SV=1 25 288 4.0E-59
sp|Q5BA96|ABNA_EMENI Probable arabinan endo-1,5-alpha-L-arabinosidase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=abnA PE=3 SV=2 8 309 1.0E-57
sp|B3EYM8|IABN_GEOSE Intracellular endo-alpha-(1->5)-L-arabinanase OS=Geobacillus stearothermophilus GN=abnB PE=1 SV=1 25 288 2.0E-57
sp|Q2U1X8|ABNC_ASPOR Probable arabinan endo-1,5-alpha-L-arabinosidase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=abnC PE=3 SV=1 18 309 3.0E-53
sp|B8NMD3|ABNC_ASPFN Probable arabinan endo-1,5-alpha-L-arabinosidase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=abnC PE=3 SV=2 18 309 3.0E-53
sp|B0YDT3|ABNC_ASPFC Probable arabinan endo-1,5-alpha-L-arabinosidase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) GN=abnC PE=3 SV=2 4 309 6.0E-49
sp|A1DKY5|ABNC_NEOFI Probable arabinan endo-1,5-alpha-L-arabinosidase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=abnC PE=3 SV=1 4 309 7.0E-49
sp|Q4W930|ABNC_ASPFU Probable arabinan endo-1,5-alpha-L-arabinosidase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=abnC PE=3 SV=2 4 309 6.0E-48
sp|A1CN18|ABNC_ASPCL Probable arabinan endo-1,5-alpha-L-arabinosidase C OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=abnC PE=3 SV=1 4 309 2.0E-47
sp|P95470|ARBA_CELJU Extracellular exo-alpha-(1->5)-L-arabinofuranosidase ArbA OS=Cellvibrio japonicus (strain Ueda107) GN=arbA PE=1 SV=1 31 309 1.0E-45
sp|A5AAG2|ABNC_ASPNC Probable arabinan endo-1,5-alpha-L-arabinosidase C OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=abnC PE=3 SV=1 4 309 1.0E-43
sp|Q5AZC8|ABNB_EMENI Arabinan endo-1,5-alpha-L-arabinosidase B OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=abnB PE=2 SV=1 32 310 4.0E-42
sp|B8N803|ABNB_ASPFN Probable arabinan endo-1,5-alpha-L-arabinosidase B OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=abnB PE=3 SV=2 1 309 2.0E-40
sp|Q5AUM3|ABNC_EMENI Arabinan endo-1,5-alpha-L-arabinosidase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=abnC PE=2 SV=1 22 309 2.0E-39
sp|Q0CRJ6|ABNC_ASPTN Probable arabinan endo-1,5-alpha-L-arabinosidase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=abnC PE=3 SV=1 9 309 2.0E-39
sp|Q0CY27|ABNB_ASPTN Probable arabinan endo-1,5-alpha-L-arabinosidase B OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=abnB PE=3 SV=2 22 308 7.0E-38
sp|Q2UI74|ABNB_ASPOR Probable arabinan endo-1,5-alpha-L-arabinosidase B OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=abnB PE=3 SV=1 1 305 1.0E-37
sp|Q4X0A5|ABNB_ASPFU Probable arabinan endo-1,5-alpha-L-arabinosidase B OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=abnB PE=3 SV=2 22 287 4.0E-33
sp|B0XTS5|ABNB_ASPFC Probable arabinan endo-1,5-alpha-L-arabinosidase B OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) GN=abnB PE=3 SV=2 22 287 8.0E-33
sp|A1DHW8|ABNB_NEOFI Probable arabinan endo-1,5-alpha-L-arabinosidase B OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=abnB PE=3 SV=2 22 287 2.0E-32
sp|Q5B8T6|ABND_EMENI Probable arabinan endo-1,5-alpha-L-arabinosidase D OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=abnD PE=2 SV=2 26 308 8.0E-29
sp|A5IKD4|EABN_THEP1 Extracellular endo-alpha-(1->5)-L-arabinanase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=Tpet_0637 PE=1 SV=1 1 257 3.0E-15
sp|P42293|EABN2_BACSU Extracellular endo-alpha-(1->5)-L-arabinanase 2 OS=Bacillus subtilis (strain 168) GN=abn2 PE=1 SV=2 2 275 4.0E-11
sp|P07129|XYNB_BACPU Beta-xylosidase OS=Bacillus pumilus GN=xynB PE=1 SV=2 33 310 5.0E-07
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GO

GO Term Description Terminal node
GO:0005975 carbohydrate metabolic process Yes
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds Yes
GO:0016787 hydrolase activity No
GO:0003824 catalytic activity No
GO:0044238 primary metabolic process No
GO:0071704 organic substance metabolic process No
GO:0008150 biological_process No
GO:0008152 metabolic process No
GO:0016798 hydrolase activity, acting on glycosyl bonds No
GO:0003674 molecular_function No

Deeploc

Deeploc data not available for this genome

SignalP

SignalP signal predicted Location Score
Yes 1 - 18 0.999763

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

CAZyme category E-value Start End
GH43_5 2.1E-100 31 307

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID5
Orthogroup6651
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|102240
Agaricus bisporus var bisporus H97 AgabiH97|102240
Agaricus bisporus var burnettii H119p4 Agabi119p4|102240 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|102240
MRSLFALALLSFASLGYAVVGPGVVTGNTAVHDPTMCKDNSGKYFVFSTGTGIEIRTSTDRTAWTFAGRVWPNGA
PWTDKYTLTSNGAIWAPDCTYINGQFWLYYSASSFGSQNSAIFLAKSSTGAPGSWSHEGMVTSSSPSNNYNAIDP
NLLIDGGRWFLSLGSFWTGIKSMNINPSNGFLADTRVTALSQRTANSGAIEASVIFKFNNSYYLFTSWDNCCRGT
SSTYNIRVGRSNSPTGDFVDQNGVALTNGGGTLVLGSHDNIVGPGGQDIMLDGDGPILIYHYYTPSGSFLGINRL
DFSSGWPVVV*
Coding >Agabi119p4|102240
ATGCGCTCTCTTTTTGCGTTAGCTCTGCTCTCTTTTGCTTCCCTCGGATATGCCGTTGTAGGCCCAGGAGTCGTT
ACAGGAAACACGGCTGTCCACGACCCTACTATGTGTAAAGACAACTCTGGAAAATACTTTGTCTTCTCTACTGGG
ACGGGGATCGAGATCAGAACCTCTACTGATCGGACGGCATGGACTTTCGCTGGAAGAGTATGGCCCAATGGAGCA
CCTTGGACAGACAAATATACACTCACTTCCAATGGTGCGATATGGGCCCCGGATTGTACCTACATTAATGGACAG
TTCTGGCTTTATTACTCGGCTTCCAGCTTCGGCTCGCAGAATTCGGCTATCTTCCTTGCCAAATCTTCCACTGGT
GCTCCCGGCAGTTGGAGCCACGAAGGCATGGTGACTTCTTCATCACCTTCCAATAACTATAATGCCATTGATCCC
AATCTCTTGATCGACGGTGGTAGATGGTTCCTTTCCCTCGGTAGTTTCTGGACAGGTATCAAGTCTATGAATATA
AACCCATCCAATGGTTTCCTCGCCGACACCAGAGTCACTGCTCTTTCTCAACGTACGGCAAACAGTGGTGCCATC
GAAGCCAGCGTCATTTTCAAATTCAACAACTCCTACTATCTCTTCACAAGTTGGGATAACTGCTGCAGGGGCACT
TCTAGTACCTACAACATACGTGTCGGACGCTCTAACTCGCCTACTGGTGATTTTGTCGATCAAAATGGAGTAGCT
CTTACAAATGGAGGTGGTACACTTGTTCTCGGCTCGCATGACAACATCGTCGGTCCCGGTGGCCAAGACATCATG
CTCGATGGCGACGGTCCGATTCTGATCTACCATTATTATACACCTTCTGGTAGCTTCCTCGGAATCAACAGGCTC
GATTTCTCCAGCGGCTGGCCCGTCGTTGTCTAA
Transcript >Agabi119p4|102240
ATGCGCTCTCTTTTTGCGTTAGCTCTGCTCTCTTTTGCTTCCCTCGGATATGCCGTTGTAGGCCCAGGAGTCGTT
ACAGGAAACACGGCTGTCCACGACCCTACTATGTGTAAAGACAACTCTGGAAAATACTTTGTCTTCTCTACTGGG
ACGGGGATCGAGATCAGAACCTCTACTGATCGGACGGCATGGACTTTCGCTGGAAGAGTATGGCCCAATGGAGCA
CCTTGGACAGACAAATATACACTCACTTCCAATGGTGCGATATGGGCCCCGGATTGTACCTACATTAATGGACAG
TTCTGGCTTTATTACTCGGCTTCCAGCTTCGGCTCGCAGAATTCGGCTATCTTCCTTGCCAAATCTTCCACTGGT
GCTCCCGGCAGTTGGAGCCACGAAGGCATGGTGACTTCTTCATCACCTTCCAATAACTATAATGCCATTGATCCC
AATCTCTTGATCGACGGTGGTAGATGGTTCCTTTCCCTCGGTAGTTTCTGGACAGGTATCAAGTCTATGAATATA
AACCCATCCAATGGTTTCCTCGCCGACACCAGAGTCACTGCTCTTTCTCAACGTACGGCAAACAGTGGTGCCATC
GAAGCCAGCGTCATTTTCAAATTCAACAACTCCTACTATCTCTTCACAAGTTGGGATAACTGCTGCAGGGGCACT
TCTAGTACCTACAACATACGTGTCGGACGCTCTAACTCGCCTACTGGTGATTTTGTCGATCAAAATGGAGTAGCT
CTTACAAATGGAGGTGGTACACTTGTTCTCGGCTCGCATGACAACATCGTCGGTCCCGGTGGCCAAGACATCATG
CTCGATGGCGACGGTCCGATTCTGATCTACCATTATTATACACCTTCTGGTAGCTTCCTCGGAATCAACAGGCTC
GATTTCTCCAGCGGCTGGCCCGTCGTTGTCTAA
Gene >Agabi119p4|102240
ATGCGCTCTCTTTTTGCGTTAGCTCTGCTCTCTTTTGCTTCCCTCGGATATGCCGTTGTAGGCCCAGGAGTCGTT
ACAGGAAACACGGCTGTCCACGACCCTACTATGTGTAAAGACAACTCTGGAAAATACTTTGTCTTCTGTGCGTCG
GTTTGGAAGGATCCTGCTTTTGAAGGAGTAATCTCATTAATTAATTTCAAGCTACTGGGACGGGGATCGAGATCA
GAACCTCTACTGATCGGACGGCATGGACTTTCGCTGGAAGAGTATGGCCCAATGGAGCACCTTGGACAGACAAAT
ATACACTCACTTCCAATGGGTATGTTGGCAGAGGTAGTAATTACTTCTTTGACGCACCTCGAAATTTCTAGTGCG
ATATGGGCCCCGGATTGTACCTACATTAATGGACAGTTCTGGGTAGGTAGACCCAGATGCATCTTTGGAAATACC
AGCTTAATCATTGCCCAGCTTTATTACTCGGCTTCCAGCTTCGGCTCGCAGAATGTAAGCTCGTTCTTCTCTCAG
AATCAAATCTTTCTATATTGTACCCTCGACAGTCGGCTATCTTCCTTGCCAAATCTTCCACTGGTGCTCCCGGTG
AGTCTAGGGTCCTGGCATGGGCGAAGTGGAGCTCTCATCCTTTTCGTTTCAGGCAGTTGGAGCCACGAAGGCATG
GTGACTTCTTCATCACCTTCCAATAACTATAATGTAAGTGTTCAATTGATAAAGAAACATCTTCTGACAATTCTT
AGGCCATTGATCCCAAGTACGTGCGGGTTCTATCAAATACAACTAATACTAAGTCACGATTTTGAATCCCATGAA
ATAGTCTCTTGATCGGTGCGTCTTAGCAATTGAACCTTGAATCCAGGCTGTTTTTAAAACTGGTTGCTTCATAGA
CGGTGGTAGATGGTTCCTTTCCCTCGGTAGTTTCTGGACAGGTATCAAGTCTATGAAGTTAGTCTCCTCTTTTCT
ATCTTCTTCACAACATCAAGCCTCATTCCTCTTTCAAGTATAAACCCATCCAATGGTTTCCTCGCCGACACCAGA
GTCACTGCTCTTTCTCAACGTACGGCAAACAGTGGTGCCATCGAAGCCAGCGTCATTTTCAAATTCAACAACTCC
TACTATCTCTTCACAAGTTGGGATAACTGCTGCAGGGGCACTTCTAGTACCTACAACATACGTGTCGGACGCTCT
AACTCGTAAGTGTGAAACTTTGCCCCCCCTCCCCCCTTCTTATTGGATATGACTGAACATGAGGGTAGGCCTACT
GGTGATTTTGTCGATCAAAATGGAGTAGCTCTTACAAATGGAGGTGGTACACTTGTTCTCGGCTCGCATGACAAC
GTGAGTTTTCAATCAAAACCCTCCAGAATGCTCGAATGACATATACACTGCAATAGATCGTCGGTCCCGGTGGCC
AAGACATCATGCTCGATGGCGACGGTCCGATTCTGATCTACCGTAAGTACTCCATCCCCCATATATTTCAACTAC
AACTAAGCAAATACATTACATTATCACACAGATTATTATACACCTTCTGGTAGCTTCGTAAGCGATTTACTCTCC
CTTTTCTCGAACTGATCGGTGACTTATCAAACAAATAGCTCGGAATCAACAGGCTCGATTTCTCCAGCGGCTGGC
CCGTCGTTGTCTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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