© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Agabi119p4|101660 |
| Gene name | |
| Location | scaffold_07:1040994..1042503 |
| Strand | - |
| Gene length (bp) | 1509 |
| Transcript length (bp) | 1296 |
| Coding sequence length (bp) | 1296 |
| Protein length (aa) | 432 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13639 | zf-RING_2 | Ring finger domain | 1.6E-11 | 338 | 381 |
| PF17123 | zf-RING_11 | RING-like zinc finger | 3.4E-11 | 338 | 363 |
| PF00097 | zf-C3HC4 | Zinc finger, C3HC4 type (RING finger) | 1.3E-04 | 339 | 380 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q69U49|RMR2_ORYSJ | Receptor homology region, transmembrane domain- and RING domain-containing protein 2 OS=Oryza sativa subsp. japonica GN=RMR1 PE=2 SV=2 | 123 | 423 | 3.0E-16 |
| sp|Q0WPW5|RMR4_ARATH | Receptor homology region, transmembrane domain- and RING domain-containing protein 4 OS=Arabidopsis thaliana GN=RMR4 PE=2 SV=1 | 125 | 383 | 4.0E-16 |
| sp|F4HZZ4|RMR6_ARATH | Receptor homology region, transmembrane domain- and RING domain-containing protein 6 OS=Arabidopsis thaliana GN=RMR6 PE=3 SV=2 | 124 | 426 | 5.0E-16 |
| sp|P87139|YDM9_SCHPO | Uncharacterized RING finger protein C57A7.09 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC57A7.09 PE=1 SV=1 | 125 | 387 | 1.0E-15 |
| sp|F4HZZ5|RMR5_ARATH | Receptor homology region, transmembrane domain- and RING domain-containing protein 5 OS=Arabidopsis thaliana GN=RMR5 PE=2 SV=1 | 112 | 423 | 7.0E-14 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q69U49|RMR2_ORYSJ | Receptor homology region, transmembrane domain- and RING domain-containing protein 2 OS=Oryza sativa subsp. japonica GN=RMR1 PE=2 SV=2 | 123 | 423 | 3.0E-16 |
| sp|Q0WPW5|RMR4_ARATH | Receptor homology region, transmembrane domain- and RING domain-containing protein 4 OS=Arabidopsis thaliana GN=RMR4 PE=2 SV=1 | 125 | 383 | 4.0E-16 |
| sp|F4HZZ4|RMR6_ARATH | Receptor homology region, transmembrane domain- and RING domain-containing protein 6 OS=Arabidopsis thaliana GN=RMR6 PE=3 SV=2 | 124 | 426 | 5.0E-16 |
| sp|P87139|YDM9_SCHPO | Uncharacterized RING finger protein C57A7.09 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC57A7.09 PE=1 SV=1 | 125 | 387 | 1.0E-15 |
| sp|F4HZZ5|RMR5_ARATH | Receptor homology region, transmembrane domain- and RING domain-containing protein 5 OS=Arabidopsis thaliana GN=RMR5 PE=2 SV=1 | 112 | 423 | 7.0E-14 |
| sp|Q5RCV8|RNF13_PONAB | E3 ubiquitin-protein ligase RNF13 OS=Pongo abelii GN=RNF13 PE=2 SV=1 | 121 | 423 | 4.0E-13 |
| sp|O43567|RNF13_HUMAN | E3 ubiquitin-protein ligase RNF13 OS=Homo sapiens GN=RNF13 PE=1 SV=1 | 121 | 423 | 4.0E-13 |
| sp|Q0VD51|RNF13_BOVIN | E3 ubiquitin-protein ligase RNF13 OS=Bos taurus GN=RNF13 PE=2 SV=1 | 121 | 385 | 4.0E-13 |
| sp|Q90972|RNF13_CHICK | E3 ubiquitin-protein ligase RNF13 OS=Gallus gallus GN=RNF13 PE=1 SV=1 | 122 | 423 | 2.0E-12 |
| sp|Q66HG0|RNF13_RAT | E3 ubiquitin-protein ligase RNF13 OS=Rattus norvegicus GN=Rnf13 PE=2 SV=1 | 121 | 431 | 2.0E-12 |
| sp|Q2TA44|RN148_BOVIN | RING finger protein 148 OS=Bos taurus GN=RNF148 PE=2 SV=1 | 112 | 386 | 2.0E-12 |
| sp|Q91XF4|RN167_MOUSE | E3 ubiquitin-protein ligase RNF167 OS=Mus musculus GN=Rnf167 PE=2 SV=1 | 38 | 423 | 2.0E-12 |
| sp|G3X9R7|RN148_MOUSE | RING finger protein 148 OS=Mus musculus GN=Rnf148 PE=2 SV=1 | 112 | 387 | 3.0E-12 |
| sp|O54965|RNF13_MOUSE | E3 ubiquitin-protein ligase RNF13 OS=Mus musculus GN=Rnf13 PE=1 SV=2 | 121 | 423 | 3.0E-12 |
| sp|Q9H6Y7|RN167_HUMAN | E3 ubiquitin-protein ligase RNF167 OS=Homo sapiens GN=RNF167 PE=1 SV=1 | 45 | 423 | 3.0E-12 |
| sp|Q06003|GOLI_DROME | Protein goliath OS=Drosophila melanogaster GN=gol PE=2 SV=3 | 120 | 386 | 4.0E-12 |
| sp|Q6NRX0|RN149_XENLA | E3 ubiquitin-protein ligase RNF149 OS=Xenopus laevis GN=rnf149 PE=2 SV=1 | 119 | 386 | 4.0E-12 |
| sp|Q6Y290|GOLI_RAT | E3 ubiquitin-protein ligase RNF130 OS=Rattus norvegicus GN=Rnf130 PE=1 SV=1 | 120 | 386 | 1.0E-11 |
| sp|F4I2Y3|RMR3_ARATH | Receptor homology region, transmembrane domain- and RING domain-containing protein 3 OS=Arabidopsis thaliana GN=RMR3 PE=3 SV=1 | 337 | 423 | 2.0E-11 |
| sp|Q8VEM1|GOLI_MOUSE | E3 ubiquitin-protein ligase RNF130 OS=Mus musculus GN=Rnf130 PE=2 SV=1 | 120 | 386 | 2.0E-11 |
| sp|Q566M8|RN150_DANRE | RING finger protein 150 OS=Danio rerio GN=rnf150 PE=2 SV=1 | 122 | 386 | 2.0E-11 |
| sp|Q95K04|RN133_MACFA | E3 ubiquitin-protein ligase RNF133 OS=Macaca fascicularis GN=RNF133 PE=2 SV=1 | 119 | 386 | 2.0E-11 |
| sp|Q5XIL0|RN167_RAT | E3 ubiquitin-protein ligase RNF167 OS=Rattus norvegicus GN=Rnf167 PE=2 SV=1 | 38 | 389 | 2.0E-11 |
| sp|Q86XS8|GOLI_HUMAN | E3 ubiquitin-protein ligase RNF130 OS=Homo sapiens GN=RNF130 PE=1 SV=1 | 120 | 386 | 2.0E-11 |
| sp|Q8WVZ7|RN133_HUMAN | E3 ubiquitin-protein ligase RNF133 OS=Homo sapiens GN=RNF133 PE=2 SV=1 | 119 | 386 | 2.0E-10 |
| sp|Q8SV35|Y733_ENCCU | Uncharacterized RING finger protein ECU07_0330 OS=Encephalitozoon cuniculi (strain GB-M1) GN=ECU07_0330 PE=3 SV=2 | 338 | 384 | 2.0E-10 |
| sp|Q9D304|RN128_MOUSE | E3 ubiquitin-protein ligase RNF128 OS=Mus musculus GN=Rnf128 PE=1 SV=1 | 121 | 386 | 2.0E-10 |
| sp|Q29RU0|RN128_BOVIN | E3 ubiquitin-protein ligase RNF128 OS=Bos taurus GN=RNF128 PE=2 SV=1 | 121 | 386 | 3.0E-10 |
| sp|Q9ULK6|RN150_HUMAN | RING finger protein 150 OS=Homo sapiens GN=RNF150 PE=2 SV=2 | 120 | 386 | 4.0E-10 |
| sp|Q8TEB7|RN128_HUMAN | E3 ubiquitin-protein ligase RNF128 OS=Homo sapiens GN=RNF128 PE=1 SV=1 | 121 | 386 | 5.0E-10 |
| sp|Q5RF74|RN128_PONAB | E3 ubiquitin-protein ligase RNF128 OS=Pongo abelii GN=RNF128 PE=2 SV=1 | 121 | 386 | 6.0E-10 |
| sp|Q3U2C5|RN149_MOUSE | E3 ubiquitin-protein ligase RNF149 OS=Mus musculus GN=Rnf149 PE=1 SV=3 | 122 | 386 | 6.0E-10 |
| sp|Q5DTZ6|RN150_MOUSE | RING finger protein 150 OS=Mus musculus GN=Rnf150 PE=2 SV=2 | 122 | 386 | 6.0E-10 |
| sp|Q8N7C7|RN148_HUMAN | RING finger protein 148 OS=Homo sapiens GN=RNF148 PE=2 SV=2 | 112 | 386 | 7.0E-10 |
| sp|Q8VZ14|RMR2_ARATH | Receptor homology region, transmembrane domain- and RING domain-containing protein 2 OS=Arabidopsis thaliana GN=RMR2 PE=2 SV=1 | 337 | 423 | 8.0E-10 |
| sp|Q8NC42|RN149_HUMAN | E3 ubiquitin-protein ligase RNF149 OS=Homo sapiens GN=RNF149 PE=2 SV=2 | 111 | 386 | 1.0E-09 |
| sp|Q9LZV8|ATL74_ARATH | RING-H2 finger protein ATL74 OS=Arabidopsis thaliana GN=ATL74 PE=2 SV=1 | 335 | 386 | 2.0E-09 |
| sp|Q8AWW4|RN128_XENLA | E3 ubiquitin-protein ligase RNF128 OS=Xenopus laevis GN=rnf128 PE=2 SV=2 | 122 | 386 | 2.0E-09 |
| sp|Q9M622|RMR1_ARATH | Receptor homology region, transmembrane domain- and RING domain-containing protein 1 OS=Arabidopsis thaliana GN=RMR1 PE=2 SV=1 | 329 | 398 | 3.0E-09 |
| sp|Q10R93|RMR1_ORYSJ | Receptor homology region, transmembrane domain- and RING domain-containing protein 1 OS=Oryza sativa subsp. japonica GN=Os03g0167500 PE=2 SV=1 | 339 | 385 | 8.0E-09 |
| sp|Q6NRV8|R111B_XENLA | E3 ubiquitin-protein ligase arkadia-B OS=Xenopus laevis GN=rnf111-b PE=2 SV=1 | 338 | 384 | 8.0E-09 |
| sp|Q0V9R0|RN111_XENTR | E3 ubiquitin-protein ligase arkadia OS=Xenopus tropicalis GN=rnf111 PE=2 SV=1 | 338 | 384 | 9.0E-09 |
| sp|Q90ZT7|R111A_XENLA | E3 ubiquitin-protein ligase arkadia-A (Fragment) OS=Xenopus laevis GN=rnf111-a PE=2 SV=1 | 338 | 384 | 9.0E-09 |
| sp|Q66J97|R111C_XENLA | E3 ubiquitin-protein ligase arkadia-C OS=Xenopus laevis GN=rnf111-c PE=2 SV=1 | 338 | 384 | 9.0E-09 |
| sp|Q6ZNA4|RN111_HUMAN | E3 ubiquitin-protein ligase Arkadia OS=Homo sapiens GN=RNF111 PE=1 SV=3 | 338 | 384 | 1.0E-08 |
| sp|Q5R476|RN111_PONAB | E3 ubiquitin-protein ligase Arkadia OS=Pongo abelii GN=RNF111 PE=2 SV=1 | 338 | 384 | 1.0E-08 |
| sp|Q99ML9|RN111_MOUSE | E3 ubiquitin-protein ligase Arkadia OS=Mus musculus GN=Rnf111 PE=1 SV=1 | 338 | 384 | 1.0E-08 |
| sp|Q9XF63|ATL3_ARATH | RING-H2 finger protein ATL3 OS=Arabidopsis thaliana GN=ATL3 PE=2 SV=1 | 337 | 415 | 1.0E-08 |
| sp|Q8H7N9|ATL31_ORYSJ | E3 ubiquitin-protein ligase Os03g0188200 OS=Oryza sativa subsp. japonica GN=Os03g0188200 PE=2 SV=1 | 337 | 387 | 2.0E-08 |
| sp|Q9LUL6|ATL61_ARATH | Putative RING-H2 finger protein ATL61 OS=Arabidopsis thaliana GN=ATL61 PE=3 SV=1 | 333 | 384 | 3.0E-08 |
| sp|O22755|ATL44_ARATH | RING-H2 finger protein ATL44 OS=Arabidopsis thaliana GN=ATL44 PE=2 SV=1 | 338 | 385 | 4.0E-08 |
| sp|Q9LZJ6|ATL5_ARATH | RING-H2 finger protein ATL5 OS=Arabidopsis thaliana GN=ATL5 PE=2 SV=1 | 338 | 397 | 7.0E-08 |
| sp|Q5SSZ7|ZNRF3_MOUSE | E3 ubiquitin-protein ligase ZNRF3 OS=Mus musculus GN=Znrf3 PE=1 SV=1 | 135 | 386 | 7.0E-08 |
| sp|E9QAU8|RN165_MOUSE | RING finger protein 165 OS=Mus musculus GN=Rnf165 PE=2 SV=1 | 338 | 384 | 7.0E-08 |
| sp|Q6ZSG1|RN165_HUMAN | RING finger protein 165 OS=Homo sapiens GN=RNF165 PE=1 SV=1 | 338 | 384 | 7.0E-08 |
| sp|Q9QYK7|RNF11_MOUSE | RING finger protein 11 OS=Mus musculus GN=Rnf11 PE=1 SV=1 | 338 | 384 | 8.0E-08 |
| sp|Q9Y3C5|RNF11_HUMAN | RING finger protein 11 OS=Homo sapiens GN=RNF11 PE=1 SV=1 | 338 | 384 | 8.0E-08 |
| sp|Q08DI6|RNF11_BOVIN | RING finger protein 11 OS=Bos taurus GN=RNF11 PE=2 SV=1 | 338 | 384 | 8.0E-08 |
| sp|Q9LJL6|ATL62_ARATH | Putative RING-H2 finger protein ATL62 OS=Arabidopsis thaliana GN=ATL62 PE=5 SV=1 | 333 | 386 | 1.0E-07 |
| sp|Q1MTR5|YG66_SCHPO | Uncharacterized RING finger membrane protein C15C4.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC15C4.06c PE=3 SV=1 | 257 | 386 | 1.0E-07 |
| sp|Q8LC69|ATL8_ARATH | RING-H2 finger protein ATL8 OS=Arabidopsis thaliana GN=ATL8 PE=2 SV=2 | 331 | 389 | 2.0E-07 |
| sp|Q9ZT49|ATL45_ARATH | RING-H2 finger protein ATL45 OS=Arabidopsis thaliana GN=ATL45 PE=2 SV=1 | 334 | 381 | 3.0E-07 |
| sp|Q68DV7|RNF43_HUMAN | E3 ubiquitin-protein ligase RNF43 OS=Homo sapiens GN=RNF43 PE=1 SV=1 | 339 | 386 | 3.0E-07 |
| sp|Q9LX93|ATL55_ARATH | E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana GN=ATL55 PE=1 SV=1 | 338 | 411 | 3.0E-07 |
| sp|P0C035|ATL60_ARATH | RING-H2 finger protein ATL60 OS=Arabidopsis thaliana GN=ATL60 PE=2 SV=1 | 333 | 384 | 4.0E-07 |
| sp|Q8L9T5|ATL2_ARATH | RING-H2 finger protein ATL2 OS=Arabidopsis thaliana GN=ATL2 PE=2 SV=2 | 337 | 423 | 4.0E-07 |
| sp|P87119|MU145_SCHPO | RING finger protein mug145 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mug145 PE=1 SV=1 | 339 | 383 | 4.0E-07 |
| sp|Q9M0R7|ATL39_ARATH | RING-H2 finger protein ATL39 OS=Arabidopsis thaliana GN=ATL39 PE=2 SV=1 | 335 | 385 | 5.0E-07 |
| sp|Q9SG96|ATL72_ARATH | RING-H2 finger protein ATL72 OS=Arabidopsis thaliana GN=ATL72 PE=2 SV=1 | 338 | 381 | 5.0E-07 |
| sp|Q9FGJ6|ATL79_ARATH | RING-H2 finger protein ATL79 OS=Arabidopsis thaliana GN=ATL79 PE=2 SV=1 | 335 | 384 | 5.0E-07 |
| sp|Q8W571|ATL32_ARATH | RING-H2 finger protein ATL32 OS=Arabidopsis thaliana GN=ATL32 PE=2 SV=3 | 337 | 385 | 7.0E-07 |
| sp|Q7L0R7|RNF44_HUMAN | RING finger protein 44 OS=Homo sapiens GN=RNF44 PE=2 SV=1 | 336 | 386 | 7.0E-07 |
| sp|Q08CG8|RNF44_DANRE | RING finger protein 44 OS=Danio rerio GN=rnf44 PE=2 SV=1 | 294 | 386 | 8.0E-07 |
| sp|Q7X843|ATL48_ARATH | RING-H2 finger protein ATL48 OS=Arabidopsis thaliana GN=ATL48 PE=1 SV=2 | 333 | 385 | 8.0E-07 |
| sp|Q9LN71|RING1_ARATH | E3 ubiquitin-protein ligase At1g12760 OS=Arabidopsis thaliana GN=At1g12760 PE=1 SV=1 | 328 | 386 | 9.0E-07 |
| sp|Q9M0R4|ATL37_ARATH | Putative RING-H2 finger protein ATL37 OS=Arabidopsis thaliana GN=ATL37 PE=3 SV=1 | 337 | 396 | 9.0E-07 |
| sp|Q8RXX9|ATL6_ARATH | E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana GN=ATL6 PE=1 SV=2 | 334 | 386 | 1.0E-06 |
| sp|Q4V7B8|RNF44_RAT | RING finger protein 44 OS=Rattus norvegicus GN=Rnf44 PE=2 SV=1 | 294 | 386 | 1.0E-06 |
| sp|Q3UHJ8|RNF44_MOUSE | RING finger protein 44 OS=Mus musculus GN=Rnf44 PE=2 SV=1 | 294 | 386 | 1.0E-06 |
| sp|Q8GT74|NIP2_ARATH | NEP1-interacting protein 2 OS=Arabidopsis thaliana GN=NIP2 PE=1 SV=1 | 339 | 384 | 1.0E-06 |
| sp|Q641J8|RF12A_XENLA | E3 ubiquitin-protein ligase RNF12-A OS=Xenopus laevis GN=rnf12-a PE=1 SV=1 | 339 | 384 | 1.0E-06 |
| sp|Q7XTV7|HIP1_ORYSJ | Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza sativa subsp. japonica GN=HIP1 PE=1 SV=2 | 282 | 381 | 1.0E-06 |
| sp|Q7T037|RF12B_XENLA | E3 ubiquitin-protein ligase RNF12-B OS=Xenopus laevis GN=rnf12-b PE=2 SV=1 | 339 | 384 | 1.0E-06 |
| sp|Q4R6Y5|ZNRF4_MACFA | Zinc/RING finger protein 4 OS=Macaca fascicularis GN=ZNRF4 PE=2 SV=1 | 339 | 384 | 2.0E-06 |
| sp|Q93Z92|RING4_ARATH | E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana GN=At4g11680 PE=2 SV=1 | 338 | 386 | 2.0E-06 |
| sp|Q9FLC6|ATL73_ARATH | RING-H2 finger protein ATL73 OS=Arabidopsis thaliana GN=ATL73 PE=2 SV=1 | 338 | 392 | 2.0E-06 |
| sp|Q8WWF5|ZNRF4_HUMAN | Zinc/RING finger protein 4 OS=Homo sapiens GN=ZNRF4 PE=2 SV=3 | 339 | 384 | 2.0E-06 |
| sp|Q07G42|RNF12_XENTR | E3 ubiquitin-protein ligase RNF12 OS=Xenopus tropicalis GN=rnf12 PE=2 SV=1 | 339 | 384 | 2.0E-06 |
| sp|Q9WTV7|RNF12_MOUSE | E3 ubiquitin-protein ligase RLIM OS=Mus musculus GN=Rlim PE=1 SV=2 | 339 | 384 | 2.0E-06 |
| sp|Q9NVW2|RNF12_HUMAN | E3 ubiquitin-protein ligase RLIM OS=Homo sapiens GN=RLIM PE=1 SV=3 | 339 | 384 | 2.0E-06 |
| sp|Q9H0F5|RNF38_HUMAN | E3 ubiquitin-protein ligase RNF38 OS=Homo sapiens GN=RNF38 PE=1 SV=4 | 336 | 386 | 2.0E-06 |
| sp|Q6NQG7|ATL78_ARATH | RING-H2 finger protein ATL78 OS=Arabidopsis thaliana GN=ATL78 PE=2 SV=1 | 338 | 388 | 2.0E-06 |
| sp|Q5M974|RN181_XENTR | E3 ubiquitin-protein ligase RNF181 OS=Xenopus tropicalis GN=rnf181 PE=2 SV=1 | 334 | 384 | 2.0E-06 |
| sp|Q9LM69|ATL80_ARATH | RING-H2 finger protein ATL80 OS=Arabidopsis thaliana GN=ATL80 PE=2 SV=1 | 331 | 389 | 2.0E-06 |
| sp|Q8BI21|RNF38_MOUSE | E3 ubiquitin-protein ligase RNF38 OS=Mus musculus GN=Rnf38 PE=2 SV=1 | 336 | 386 | 2.0E-06 |
| sp|Q9BV68|RN126_HUMAN | E3 ubiquitin-protein ligase RNF126 OS=Homo sapiens GN=RNF126 PE=1 SV=1 | 337 | 393 | 2.0E-06 |
| sp|Q9LS99|ATL77_ARATH | RING-H2 finger protein ATL77 OS=Arabidopsis thaliana GN=ATL77 PE=2 SV=1 | 338 | 389 | 3.0E-06 |
| sp|Q8LF65|ATL17_ARATH | RING-H2 finger protein ATL17 OS=Arabidopsis thaliana GN=ATL17 PE=2 SV=2 | 337 | 384 | 3.0E-06 |
| sp|P0C041|ATL53_ARATH | Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana GN=ATL53 PE=3 SV=2 | 298 | 387 | 3.0E-06 |
| sp|Q9ZU51|RHA2B_ARATH | Probable E3 ubiquitin-protein ligase RHA2B OS=Arabidopsis thaliana GN=RHA2B PE=1 SV=2 | 313 | 382 | 4.0E-06 |
| sp|Q94BY6|ATL75_ARATH | RING-H2 finger protein ATL75 OS=Arabidopsis thaliana GN=ATL75 PE=2 SV=1 | 338 | 389 | 4.0E-06 |
| sp|Q8GT75|NIP1_ARATH | NEP1-interacting protein 1 OS=Arabidopsis thaliana GN=NIP1 PE=1 SV=2 | 339 | 384 | 5.0E-06 |
| sp|Q6GPV5|RN181_XENLA | E3 ubiquitin-protein ligase RNF181 OS=Xenopus laevis GN=rnf181 PE=2 SV=1 | 334 | 384 | 5.0E-06 |
| sp|Q91YL2|RN126_MOUSE | E3 ubiquitin-protein ligase RNF126 OS=Mus musculus GN=Rnf126 PE=1 SV=1 | 337 | 393 | 5.0E-06 |
| sp|Q5NCP0|RNF43_MOUSE | E3 ubiquitin-protein ligase RNF43 OS=Mus musculus GN=Rnf43 PE=2 SV=1 | 339 | 386 | 5.0E-06 |
| sp|P0C034|ATL10_ARATH | RING-H2 finger protein ATL10 OS=Arabidopsis thaliana GN=ATL10 PE=2 SV=1 | 338 | 389 | 5.0E-06 |
| sp|Q9Y252|RNF6_HUMAN | E3 ubiquitin-protein ligase RNF6 OS=Homo sapiens GN=RNF6 PE=1 SV=1 | 311 | 392 | 6.0E-06 |
| sp|Q9D9X6|ZSWM2_MOUSE | E3 ubiquitin-protein ligase Zswim2 OS=Mus musculus GN=Zswim2 PE=1 SV=1 | 338 | 387 | 7.0E-06 |
| sp|Q4KLR8|ZNRF3_XENLA | E3 ubiquitin-protein ligase ZNRF3 OS=Xenopus laevis GN=znrf3 PE=2 SV=1 | 338 | 386 | 9.0E-06 |
| sp|Q9SZL4|ATL18_ARATH | RING-H2 finger protein ATL18 OS=Arabidopsis thaliana GN=ATL18 PE=2 SV=1 | 334 | 396 | 9.0E-06 |
| sp|Q9FKX5|NIPL1_ARATH | NEP1-interacting protein-like 1 OS=Arabidopsis thaliana GN=ATL27 PE=2 SV=1 | 337 | 381 | 9.0E-06 |
| sp|Q84W40|ATL11_ARATH | RING-H2 finger protein ATL11 OS=Arabidopsis thaliana GN=ATL11 PE=2 SV=2 | 337 | 384 | 1.0E-05 |
| sp|O49500|MBR2_ARATH | E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana GN=MBR2 PE=1 SV=1 | 339 | 381 | 1.0E-05 |
| sp|Q8GYT9|SIS3_ARATH | E3 ubiquitin-protein ligase SIS3 OS=Arabidopsis thaliana GN=SIS3 PE=2 SV=2 | 338 | 384 | 1.0E-05 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0046872 | metal ion binding | Yes |
| GO:0043169 | cation binding | No |
| GO:0043167 | ion binding | No |
| GO:0005488 | binding | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 21 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 224 | 246 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Agabi119p4|101660 MLLGIVVCNFLPFFFWLASATPTQITHDSLTTTQSDRTWLWSWAWGSESTVSVVDHSPVISYTSRPAAFGAEIAD PILGYVIPLSSFTAPCGSNDTADSDSPSNSGCPKLCLTDTRQPTETWIALVQRGGCEFVKKVREVQGFGAKAVVV GGEDPEVSGYPDTLVNMYSPEDASDINIAATYIKFSDYMQLYTLISSSNTTHSGLQTLSLLITAEYSAWEWYSPI ITFIVILLLPSVLTFITLLIHRIRAARAAQRERAPEDIVRRLPWRVYTGTGWEKHEGGEPVYDTPRSSDVDLEEG RSPVEVAASERGSSPTACSDASTSERLMHHPWFEAQLECAICLSEFAKGDRVRVLPCQHIFHLSEVDEWLIHRKK LCPICKADVTQPCHPSNPHTSPSSAVIHDTLGSRPSHEPQATESTPLLFHGNEEHD* |
| Coding | >Agabi119p4|101660 ATGCTTTTGGGCATTGTGGTCTGCAATTTTCTCCCCTTTTTCTTTTGGCTCGCCTCTGCCACGCCTACTCAAATC ACCCATGATTCTCTGACAACAACACAATCCGATAGGACGTGGTTGTGGAGTTGGGCTTGGGGGTCTGAAAGTACT GTCTCTGTCGTTGACCATTCGCCTGTGATCTCCTACACTTCCAGGCCGGCTGCTTTTGGCGCAGAGATAGCAGAT CCCATTTTGGGCTACGTTATTCCTCTTTCTTCGTTTACTGCTCCGTGCGGAAGCAATGATACTGCCGACTCCGAT TCCCCATCGAATTCAGGTTGCCCGAAACTATGCCTTACAGACACACGCCAGCCGACAGAAACGTGGATTGCACTT GTTCAACGCGGTGGTTGCGAGTTTGTAAAAAAAGTACGAGAGGTACAGGGCTTTGGTGCGAAAGCTGTCGTTGTA GGGGGAGAAGATCCAGAGGTTTCGGGTTATCCTGATACCCTCGTTAACATGTACAGCCCAGAGGATGCCTCTGAC ATCAATATTGCCGCGACCTACATCAAGTTTTCGGACTATATGCAACTCTACACACTCATATCCAGTTCGAATACC ACACATTCTGGGCTGCAAACACTTAGTCTTCTGATTACCGCAGAATACTCCGCGTGGGAGTGGTACTCGCCAATA ATCACCTTCATAGTCATCTTGCTTCTTCCATCAGTTTTGACATTCATTACCCTGCTCATACACCGCATACGGGCT GCTCGTGCAGCACAACGTGAACGTGCCCCCGAAGACATTGTCCGGAGACTTCCATGGCGAGTATATACAGGCACT GGTTGGGAGAAGCATGAAGGCGGTGAACCCGTTTACGATACTCCTCGCTCCTCAGACGTCGATCTGGAAGAAGGG AGGTCACCTGTAGAAGTGGCTGCATCCGAACGAGGGTCTAGTCCAACGGCTTGTTCTGATGCTTCTACTTCGGAG CGGCTAATGCACCACCCGTGGTTCGAAGCCCAACTGGAGTGTGCTATCTGTCTATCCGAGTTTGCGAAAGGAGAC AGAGTCCGTGTGTTACCTTGCCAGCATATATTCCATCTCAGCGAAGTAGACGAGTGGCTTATCCATCGAAAAAAA CTGTGCCCTATATGCAAAGCCGACGTAACCCAACCGTGCCATCCTTCGAACCCACACACAAGTCCATCATCAGCA GTTATCCATGATACTCTTGGCAGTCGACCGTCACATGAACCACAAGCGACAGAATCAACACCGCTGTTATTCCAT GGTAACGAAGAACATGATTGA |
| Transcript | >Agabi119p4|101660 ATGCTTTTGGGCATTGTGGTCTGCAATTTTCTCCCCTTTTTCTTTTGGCTCGCCTCTGCCACGCCTACTCAAATC ACCCATGATTCTCTGACAACAACACAATCCGATAGGACGTGGTTGTGGAGTTGGGCTTGGGGGTCTGAAAGTACT GTCTCTGTCGTTGACCATTCGCCTGTGATCTCCTACACTTCCAGGCCGGCTGCTTTTGGCGCAGAGATAGCAGAT CCCATTTTGGGCTACGTTATTCCTCTTTCTTCGTTTACTGCTCCGTGCGGAAGCAATGATACTGCCGACTCCGAT TCCCCATCGAATTCAGGTTGCCCGAAACTATGCCTTACAGACACACGCCAGCCGACAGAAACGTGGATTGCACTT GTTCAACGCGGTGGTTGCGAGTTTGTAAAAAAAGTACGAGAGGTACAGGGCTTTGGTGCGAAAGCTGTCGTTGTA GGGGGAGAAGATCCAGAGGTTTCGGGTTATCCTGATACCCTCGTTAACATGTACAGCCCAGAGGATGCCTCTGAC ATCAATATTGCCGCGACCTACATCAAGTTTTCGGACTATATGCAACTCTACACACTCATATCCAGTTCGAATACC ACACATTCTGGGCTGCAAACACTTAGTCTTCTGATTACCGCAGAATACTCCGCGTGGGAGTGGTACTCGCCAATA ATCACCTTCATAGTCATCTTGCTTCTTCCATCAGTTTTGACATTCATTACCCTGCTCATACACCGCATACGGGCT GCTCGTGCAGCACAACGTGAACGTGCCCCCGAAGACATTGTCCGGAGACTTCCATGGCGAGTATATACAGGCACT GGTTGGGAGAAGCATGAAGGCGGTGAACCCGTTTACGATACTCCTCGCTCCTCAGACGTCGATCTGGAAGAAGGG AGGTCACCTGTAGAAGTGGCTGCATCCGAACGAGGGTCTAGTCCAACGGCTTGTTCTGATGCTTCTACTTCGGAG CGGCTAATGCACCACCCGTGGTTCGAAGCCCAACTGGAGTGTGCTATCTGTCTATCCGAGTTTGCGAAAGGAGAC AGAGTCCGTGTGTTACCTTGCCAGCATATATTCCATCTCAGCGAAGTAGACGAGTGGCTTATCCATCGAAAAAAA CTGTGCCCTATATGCAAAGCCGACGTAACCCAACCGTGCCATCCTTCGAACCCACACACAAGTCCATCATCAGCA GTTATCCATGATACTCTTGGCAGTCGACCGTCACATGAACCACAAGCGACAGAATCAACACCGCTGTTATTCCAT GGTAACGAAGAACATGATTGA |
| Gene | >Agabi119p4|101660 ATGCTTTTGGGCATTGTGGTCTGCAATTTTCTCCCCTTTTTCTTTTGGCTCGCCTCTGCCACGCCTACTCAAATC ACCCATGATTCTCTGACAACAACACAATCCGATAGGACGTGGTTGTGGAGTTGGGCTTGGGGGTCTGAAAGTACT GTCTCTGTCGTTGACCATTCGCCTGTGATCTCCTACACTTCCAGGCCGGGTGAGCATCGGTATCTCTGGCTGGAT CTTCCTTCAACTAATGTACACCATAGCTGCTTTTGGCGCAGAGATAGCAGATCCCATTTTGGGCTACGTTATTCC TCTTTCTTCGTTTACTGCTCCGTGCGGAAGCAATGATACTGCCGACTCCGATTCCCCATCGAATTCAGGTTGCCC GAAACTATGCCTTACAGACACACGCCAGCCGACAGAAACGTGGATTGCACTTGTTCAACGCGGTGGTTGCGAGTT TGTAAAAAAAGTACGAGAGGTACAGGGCTTTGGTGCGAAAGCTGTCGTTGTAGGGGGAGAAGATCCAGAGGTTTC GGGTTATCCTGATACCCTCGTTAACATGTACAGCCCAGGTTCGTATTTACAGCCCTTTTGGTCGAGTTTCCAGCC GTCTCACTTGCTCCACAAGAGGATGCCTCTGACATCAATATTGCCGCGACCTACATCAAGTTTTCGGACTATATG CAACTCTACACACTCATATCCAGTTCGAATACCACACATTCTGGGCTGCAAACACTTAGTCTTCTGATTACCGCA GAATACTCCGCGTGGGAGTGGTACTCGTAGGTTTCCTCCTTTTCTTACTCCTTCGTCATCGCTCTGAAAATGGTT TAGGCCAATAATCACCTTCATAGTCATCTTGCTTCTTCCATCAGTTTTGACATTCATTACCCTGCTCATACACCG CATACGGGCTGCTCGTGCAGCACAACGTGAACGTGCCCCCGAAGACATTGTCCGGAGACTTCCATGGCGAGTATA TACAGGCACTGGTTGGGAGAAGCATGAAGGCGGTGAACCCGTTTACGATACTCCTCGCTCCTCAGACGTCGATCT GGAAGAAGGGAGGTCACCTGTAGAAGTGGCTGCATCCGAACGAGGGTCTAGTCCAACGGCTTGTTCTGATGCTTC TACTTCGGAGCGGCTAATGCACCACCCGTGGTTCGAAGCCCAACTGGAGTGTGCTATCTGTCTATCCGAGTTTGC GAAAGGAGACAGAGTCCGTGTGTTACCTTGCCAGCATATATTCCATCTCAGCGAAGTAGACGAGTGGCTTATCCA TCGAAAAAAACTGGTAGGTTTTTTACCTGTGCATTTGAGCATACTTCTCACCCACTTCATCGTTAGTGCCCTATA TGCAAAGCCGACGTAACCCAACCGTGCCATCCTTCGAACCCACACACAAGTCCATCATCAGCAGTTATCCATGAT ACTCTTGGCAGTCGACCGTCACATGAACCACAAGCGACAGAATCAACACCGCTGTTATTCCATGGTAACGAAGAA CATGATTGA |