Fungal Genomics

at Utrecht University

General Properties

Protein ID	Agabi119p4\|101630
Gene name
Location	scaffold_07:1037182..1038797
Strand	-
Gene length (bp)	1615
Transcript length (bp)	1236
Coding sequence length (bp)	1236
Protein length (aa)	412

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00642	zf-CCCH	Zinc finger C-x8-C-x5-C-x3-H type (and similar)	5.6E-07	251	276
PF18044	zf-CCCH_4	CCCH-type zinc finger	1.6E-06	254	275

Swissprot hits

(None)

GO

GO Term	Description	Terminal node
GO:0046872	metal ion binding	Yes
GO:0043169	cation binding	No
GO:0043167	ion binding	No
GO:0005488	binding	No
GO:0003674	molecular_function	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 54	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Agabi119p4\|101630 MSTKTKKYPPLKKRHTKPCKYFQFGLCTNTAEECNFAHVSVMPSLTFPPSMQGLHVLGRGHDINVIPPPSHPSSY TGACSYVNPYPTHPPYYYHPWAPANLYPGHPGSFTVGSPEIPTNVQSPDVKSRSYSTSMSVASPQLDAPCIDFDS TVGALGLTRNEENEDENDCVRTGNPNFVEHQHIQHQSQVRVEDRPLFDRPEGYAMRESPVWDSSGTPHQTSWDGA WGSRNQATRGPRRSIFRTVSRKTTKYKTKPCKFYTVENGCPNGDRCTFIHSTDVPPVPPMTLSHSQNTRPRRKSD SYLQTPCIAAFKGSGEPDIERPRVDTSETEDNKEKKKDFFPITWRVIGGGVLIGGKRAENPGEKGLSTDRGEEVE EVSDDDKNDKVIEKELPKLCAKDLKRRSRSMSPSIP*
Coding	>Agabi119p4\|101630 ATGTCAACCAAAACGAAGAAGTATCCTCCGCTCAAGAAGCGCCACACGAAACCTTGCAAGTATTTTCAATTTGGA CTATGTACAAACACTGCCGAAGAGTGTAACTTCGCGCATGTGTCAGTTATGCCAAGTCTGACCTTTCCCCCTTCG ATGCAAGGGCTACATGTGTTAGGGCGAGGCCATGATATCAATGTTATACCCCCGCCATCTCACCCGTCATCATAC ACTGGAGCTTGCAGTTATGTTAATCCTTATCCCACCCACCCACCCTATTACTACCATCCCTGGGCACCAGCAAAC CTTTACCCAGGACATCCAGGCTCTTTCACTGTTGGGAGCCCTGAAATTCCTACCAATGTTCAGTCTCCGGACGTT AAATCGCGATCCTATTCAACCTCAATGTCGGTTGCTAGTCCACAGCTAGACGCGCCCTGCATTGATTTTGATTCT ACGGTCGGAGCCCTCGGCTTGACGAGAAACGAAGAGAACGAGGATGAAAATGATTGTGTTAGGACGGGAAATCCA AATTTTGTAGAACATCAACATATTCAACATCAATCGCAGGTTCGTGTAGAAGATCGACCGTTATTCGATAGACCC GAAGGATATGCAATGCGTGAATCCCCTGTTTGGGACTCTAGCGGAACGCCACACCAAACCTCGTGGGATGGAGCA TGGGGTAGTAGAAATCAGGCAACAAGGGGACCCCGTCGCAGTATATTTCGGACTGTTTCACGGAAGACCACTAAA TACAAGACCAAACCCTGTAAATTTTACACCGTTGAGAATGGGTGTCCCAATGGTGATCGCTGTACTTTCATCCAT AGCACAGATGTTCCTCCTGTGCCTCCCATGACTCTGAGTCATTCGCAAAACACAAGGCCGCGTCGGAAGAGTGAC AGCTACTTACAGACACCCTGCATCGCTGCTTTCAAGGGCAGTGGGGAACCGGATATTGAGAGACCACGAGTTGAC ACTTCGGAGACTGAAGACAATAAGGAGAAAAAGAAGGACTTCTTCCCCATCACTTGGCGTGTGATTGGAGGCGGC GTACTGATTGGTGGTAAACGCGCGGAGAACCCGGGGGAGAAAGGCTTGAGCACCGATCGAGGAGAGGAGGTGGAA GAAGTCAGCGATGACGATAAAAATGACAAAGTCATTGAGAAAGAATTGCCGAAGCTCTGTGCAAAGGACCTCAAG CGAAGATCGAGGTCAATGAGCCCATCTATTCCATAA
Transcript	>Agabi119p4\|101630 ATGTCAACCAAAACGAAGAAGTATCCTCCGCTCAAGAAGCGCCACACGAAACCTTGCAAGTATTTTCAATTTGGA CTATGTACAAACACTGCCGAAGAGTGTAACTTCGCGCATGTGTCAGTTATGCCAAGTCTGACCTTTCCCCCTTCG ATGCAAGGGCTACATGTGTTAGGGCGAGGCCATGATATCAATGTTATACCCCCGCCATCTCACCCGTCATCATAC ACTGGAGCTTGCAGTTATGTTAATCCTTATCCCACCCACCCACCCTATTACTACCATCCCTGGGCACCAGCAAAC CTTTACCCAGGACATCCAGGCTCTTTCACTGTTGGGAGCCCTGAAATTCCTACCAATGTTCAGTCTCCGGACGTT AAATCGCGATCCTATTCAACCTCAATGTCGGTTGCTAGTCCACAGCTAGACGCGCCCTGCATTGATTTTGATTCT ACGGTCGGAGCCCTCGGCTTGACGAGAAACGAAGAGAACGAGGATGAAAATGATTGTGTTAGGACGGGAAATCCA AATTTTGTAGAACATCAACATATTCAACATCAATCGCAGGTTCGTGTAGAAGATCGACCGTTATTCGATAGACCC GAAGGATATGCAATGCGTGAATCCCCTGTTTGGGACTCTAGCGGAACGCCACACCAAACCTCGTGGGATGGAGCA TGGGGTAGTAGAAATCAGGCAACAAGGGGACCCCGTCGCAGTATATTTCGGACTGTTTCACGGAAGACCACTAAA TACAAGACCAAACCCTGTAAATTTTACACCGTTGAGAATGGGTGTCCCAATGGTGATCGCTGTACTTTCATCCAT AGCACAGATGTTCCTCCTGTGCCTCCCATGACTCTGAGTCATTCGCAAAACACAAGGCCGCGTCGGAAGAGTGAC AGCTACTTACAGACACCCTGCATCGCTGCTTTCAAGGGCAGTGGGGAACCGGATATTGAGAGACCACGAGTTGAC ACTTCGGAGACTGAAGACAATAAGGAGAAAAAGAAGGACTTCTTCCCCATCACTTGGCGTGTGATTGGAGGCGGC GTACTGATTGGTGGTAAACGCGCGGAGAACCCGGGGGAGAAAGGCTTGAGCACCGATCGAGGAGAGGAGGTGGAA GAAGTCAGCGATGACGATAAAAATGACAAAGTCATTGAGAAAGAATTGCCGAAGCTCTGTGCAAAGGACCTCAAG CGAAGATCGAGGTCAATGAGCCCATCTATTCCATAA
Gene	>Agabi119p4\|101630 ATGTCAACCAAAACGAAGAAGTATCCTCCGCTCAAGAAGCGCCACAGTAAGTACTTGCATATCCAACTTTCCATC TTCTTTTCAACTTGTTTTTTGCGTTCGGTACACTTCCGACATATATGTTCTATAGTTTGCTGACAAATTACATAG CGAAACCTTGCAAGTATTTTCAATTTGGACTATGTACAAACACTGCCGAAGAGTGTAACTTCGCGCATGTGTCAG TTATGCCAAGTCTGACCTTTCCCCCTTCGATGCAAGGGCTACATGTGTTAGGGCGAGGCCATGGTGAGTGTTCCC GTTGAAGCACAGCGTATTATTGATCATGTATATGTTGTCTTGTCAGATATCAATGTTATACCCCCGCCATCTCAC CGTAGGCCTCGATGTTGTCATTCAGTTTCATCGATATACTAATAATGGTATAGCGTCATCATACACTGGAGCTTG CAGTTATGTTAATCCTTATCCCACCCACCCACCCTATTACTACCATCCCTGGGCACCAGCAAACCTTTACCCAGG ACATCCAGGCTCTTTCACTGTTGGGAGCCCTGAAATTCCTACCAATGTTCAGTCTCCGGACGTTAAATCGCGATC CTATTCAACCTCAATGTCGGTTGCTAGTCCACAGCTAGACGCGCCCTGCATTGATTTTGATTCTACGGTCGGAGC CCTCGGCTTGACGAGAAACGAAGAGAACGAGGATGAAAATGATTGTGTTAGGACGGGAAATCCAAATGTAATTCA AGTGAATCACCACGACGACGACGTCTTCACTGAGGACCCGCAGTTTGTAGAACATCAACATATTCAACATCAATC GCAGGTTCGTGTAGAAGATCGACCGTTATTCGATAGACCCGAAGGATATGCAATGCGTGAATCCCCTGTTTGGGA CTCTAGCGGAACGCCACACCAAACCTCGTGGGATGGAGCATGGGGTAGTAGAAATCAGGCAACAAGGGGACCCCG TCGCAGTATATTTCGGACTGTTTCACGGAAGACCACTAAATACAAGAGTACGTGCGCAATATCACTTGACCGGTT TTCTATTAGCTGACTTGACGGTAGCCAAACCCTGTAAATTTTACACCGTTGAGAATGGGTGTCCCAATGGTGATC GCTGTACTTTGTGAGTCACCACTCTTGCTTTTTGCGTGGTCGCCGACCGTATACTTATGATGTTTATTTTAGCAT CCATAGCACAGATGTTCCTCCTGTGCCTCCCATGACTCTGAGTCATTCGCAAAACACAAGGCCGCGTCGGAAGAG TGACAGCTACTTACAGACACCCTGCATCGCTGCTTTCAAGGGCAGTGGGGAACCGGATATTGAGAGACCACGAGT TGACACTTCGGAGACTGAAGACAATAAGGAGAAAAAGAAGGACTTCTTCCCCATCACTTGGCGTGTGATTGGAGG CGGCGTACTGATTGGTGGTAAACGCGCGGAGAACCCGGGGGAGAAAGGCTTGAGCACCGATCGAGGAGAGGAGGT GGAAGAAGTCAGCGATGACGATAAAAATGACAAAGTCATTGAGAAAGAATTGCCGAAGCTCTGTGCAAAGGACCT CAAGCGAAGATCGAGGTCAATGAGCCCATCTATTCCATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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