© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Agabi119p4|101310 |
| Gene name | |
| Location | scaffold_07:972184..973544 |
| Strand | + |
| Gene length (bp) | 1360 |
| Transcript length (bp) | 1245 |
| Coding sequence length (bp) | 1245 |
| Protein length (aa) | 415 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF09139 | Tam41_Mmp37 | Phosphatidate cytidylyltransferase, mitochondrial | 7.2E-113 | 90 | 409 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q6DJM2|TAM41_XENLA | Phosphatidate cytidylyltransferase, mitochondrial OS=Xenopus laevis GN=tamm41 PE=2 SV=1 | 80 | 409 | 2.0E-66 |
| sp|P53230|TAM41_YEAST | Phosphatidate cytidylyltransferase, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TAM41 PE=1 SV=1 | 69 | 406 | 4.0E-61 |
| sp|Q3B7H2|TAM41_DANRE | Phosphatidate cytidylyltransferase, mitochondrial OS=Danio rerio GN=tamm41 PE=2 SV=1 | 80 | 413 | 7.0E-60 |
| sp|O74339|TAM41_SCHPO | Phosphatidate cytidylyltransferase, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tam41 PE=1 SV=3 | 48 | 409 | 2.0E-59 |
| sp|Q3TUH1|TAM41_MOUSE | Phosphatidate cytidylyltransferase, mitochondrial OS=Mus musculus GN=Tamm41 PE=1 SV=2 | 90 | 413 | 2.0E-59 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q6DJM2|TAM41_XENLA | Phosphatidate cytidylyltransferase, mitochondrial OS=Xenopus laevis GN=tamm41 PE=2 SV=1 | 80 | 409 | 2.0E-66 |
| sp|P53230|TAM41_YEAST | Phosphatidate cytidylyltransferase, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TAM41 PE=1 SV=1 | 69 | 406 | 4.0E-61 |
| sp|Q3B7H2|TAM41_DANRE | Phosphatidate cytidylyltransferase, mitochondrial OS=Danio rerio GN=tamm41 PE=2 SV=1 | 80 | 413 | 7.0E-60 |
| sp|O74339|TAM41_SCHPO | Phosphatidate cytidylyltransferase, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tam41 PE=1 SV=3 | 48 | 409 | 2.0E-59 |
| sp|Q3TUH1|TAM41_MOUSE | Phosphatidate cytidylyltransferase, mitochondrial OS=Mus musculus GN=Tamm41 PE=1 SV=2 | 90 | 413 | 2.0E-59 |
| sp|Q32L81|TAM41_BOVIN | Phosphatidate cytidylyltransferase, mitochondrial OS=Bos taurus GN=TAMM41 PE=2 SV=1 | 93 | 413 | 7.0E-57 |
| sp|Q96BW9|TAM41_HUMAN | Phosphatidate cytidylyltransferase, mitochondrial OS=Homo sapiens GN=TAMM41 PE=1 SV=2 | 80 | 395 | 6.0E-51 |
| sp|Q8INF2|TAM41_DROME | Phosphatidate cytidylyltransferase, mitochondrial OS=Drosophila melanogaster GN=CG33331 PE=2 SV=1 | 89 | 412 | 7.0E-47 |
| sp|Q550P4|TAM41_DICDI | Phosphatidate cytidylyltransferase, mitochondrial OS=Dictyostelium discoideum GN=DDB_G0277049 PE=3 SV=1 | 100 | 402 | 2.0E-39 |
| sp|Q9N4G7|TAM41_CAEEL | Phosphatidate cytidylyltransferase, mitochondrial OS=Caenorhabditis elegans GN=Y71F9B.2 PE=3 SV=2 | 101 | 410 | 6.0E-35 |
| sp|Q61X59|TAM41_CAEBR | Phosphatidate cytidylyltransferase, mitochondrial OS=Caenorhabditis briggsae GN=CBG04116 PE=3 SV=1 | 101 | 410 | 2.0E-33 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0004605 | phosphatidate cytidylyltransferase activity | Yes |
| GO:0032049 | cardiolipin biosynthetic process | Yes |
| GO:0045017 | glycerolipid biosynthetic process | No |
| GO:0006644 | phospholipid metabolic process | No |
| GO:0019637 | organophosphate metabolic process | No |
| GO:0006796 | phosphate-containing compound metabolic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0006650 | glycerophospholipid metabolic process | No |
| GO:1901576 | organic substance biosynthetic process | No |
| GO:0032048 | cardiolipin metabolic process | No |
| GO:0046474 | glycerophospholipid biosynthetic process | No |
| GO:0008610 | lipid biosynthetic process | No |
| GO:0046471 | phosphatidylglycerol metabolic process | No |
| GO:0044249 | cellular biosynthetic process | No |
| GO:0008152 | metabolic process | No |
| GO:0016740 | transferase activity | No |
| GO:0003674 | molecular_function | No |
| GO:0016772 | transferase activity, transferring phosphorus-containing groups | No |
| GO:0070567 | cytidylyltransferase activity | No |
| GO:0009058 | biosynthetic process | No |
| GO:0006629 | lipid metabolic process | No |
| GO:0009987 | cellular process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0003824 | catalytic activity | No |
| GO:0044255 | cellular lipid metabolic process | No |
| GO:0008654 | phospholipid biosynthetic process | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0090407 | organophosphate biosynthetic process | No |
| GO:0016779 | nucleotidyltransferase activity | No |
| GO:0006655 | phosphatidylglycerol biosynthetic process | No |
| GO:0008150 | biological_process | No |
| GO:0006793 | phosphorus metabolic process | No |
| GO:0046486 | glycerolipid metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 28 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Agabi119p4|101310 MLAAAARRPSLATVVLVRRFATEPVAAGSNSHSSSPPPPLPTSKPRSHLYPHPRPAKSQQLPRNSNLPRLPPTFG RNQLLPVTDATRALLEDVVAKFNAPIRYAFAYGSGVFEQDGREQDAETPMLDFMFAVTHPAHFHYINMQQYPAHY PMHARMLGSSYVERVEDIGPGVWFNAYVPMNGKVIKYGVTSIDNLCNDLLNWRTLYLAGRMHKPLRIIKDDARVR LTQQVNLTSAVRAALLTLPDQFSETQLFETIAAISYNGDPRMVLPAENRGKVGNIVRKQGPQFKELYQRLLVGLP GTHWPTHLNGIKQDTSPHARTYHLRKLPHNLLIRVRSRFSERGVSEELLKEDENAYWLKLTADEEVLRKVIMEEI GKIVRGPATVQSMKGIVTAGIGKSIKYGTTKIGKWWSGS* |
| Coding | >Agabi119p4|101310 ATGCTCGCCGCTGCAGCTCGAAGGCCATCGCTCGCCACCGTCGTCCTCGTCCGCCGCTTTGCTACAGAACCAGTC GCTGCAGGCAGTAACTCTCATTCCTCGTCGCCCCCTCCACCACTCCCGACTTCCAAACCCCGATCTCACCTCTAT CCTCATCCTCGACCCGCTAAATCTCAGCAGCTACCCCGCAATTCTAATTTACCCCGACTACCTCCTACATTTGGT CGTAATCAACTGTTACCCGTGACAGATGCCACACGAGCGCTGCTAGAGGATGTCGTGGCCAAGTTCAACGCACCT ATACGATATGCCTTTGCGTATGGGTCAGGGGTGTTCGAGCAAGATGGCCGGGAACAAGATGCCGAAACACCGATG TTGGATTTTATGTTCGCAGTGACCCATCCAGCACATTTTCACTATATCAATATGCAACAGTACCCGGCACATTAC CCCATGCACGCGAGAATGCTTGGGTCGAGTTATGTCGAGAGAGTAGAGGATATAGGGCCAGGAGTATGGTTCAAT GCCTACGTCCCTATGAACGGTAAAGTGATCAAATACGGTGTCACCAGCATTGATAACCTATGCAACGATCTACTC AATTGGCGTACTTTATACCTGGCCGGTCGCATGCACAAGCCTCTACGGATCATCAAAGACGATGCTCGTGTGCGA TTAACCCAACAAGTCAACCTCACGTCCGCAGTACGCGCGGCACTCCTTACACTCCCGGATCAATTCTCGGAAACG CAGCTGTTCGAAACTATCGCTGCCATTTCATATAATGGTGATCCAAGAATGGTTCTTCCTGCGGAAAATCGTGGA AAGGTTGGGAATATTGTTCGTAAACAGGGACCGCAATTTAAAGAATTGTATCAACGACTTCTGGTTGGACTTCCT GGGACTCATTGGCCGACACATTTGAATGGAATCAAACAAGACACGAGTCCCCATGCCAGAACCTATCATCTTCGC AAATTACCGCATAACTTGCTGATTCGGGTCCGGAGTCGGTTTTCGGAAAGAGGTGTGAGTGAAGAATTGTTGAAA GAGGATGAGAATGCCTATTGGTTAAAGTTGACCGCGGATGAAGAAGTGTTGAGGAAGGTGATTATGGAGGAAATA GGTAAGATTGTTAGGGGTCCTGCGACGGTGCAGTCGATGAAGGGAATTGTAACGGCTGGCATCGGGAAGAGCATC AAGTATGGTACGACGAAGATTGGCAAGTGGTGGAGCGGTTCGTGA |
| Transcript | >Agabi119p4|101310 ATGCTCGCCGCTGCAGCTCGAAGGCCATCGCTCGCCACCGTCGTCCTCGTCCGCCGCTTTGCTACAGAACCAGTC GCTGCAGGCAGTAACTCTCATTCCTCGTCGCCCCCTCCACCACTCCCGACTTCCAAACCCCGATCTCACCTCTAT CCTCATCCTCGACCCGCTAAATCTCAGCAGCTACCCCGCAATTCTAATTTACCCCGACTACCTCCTACATTTGGT CGTAATCAACTGTTACCCGTGACAGATGCCACACGAGCGCTGCTAGAGGATGTCGTGGCCAAGTTCAACGCACCT ATACGATATGCCTTTGCGTATGGGTCAGGGGTGTTCGAGCAAGATGGCCGGGAACAAGATGCCGAAACACCGATG TTGGATTTTATGTTCGCAGTGACCCATCCAGCACATTTTCACTATATCAATATGCAACAGTACCCGGCACATTAC CCCATGCACGCGAGAATGCTTGGGTCGAGTTATGTCGAGAGAGTAGAGGATATAGGGCCAGGAGTATGGTTCAAT GCCTACGTCCCTATGAACGGTAAAGTGATCAAATACGGTGTCACCAGCATTGATAACCTATGCAACGATCTACTC AATTGGCGTACTTTATACCTGGCCGGTCGCATGCACAAGCCTCTACGGATCATCAAAGACGATGCTCGTGTGCGA TTAACCCAACAAGTCAACCTCACGTCCGCAGTACGCGCGGCACTCCTTACACTCCCGGATCAATTCTCGGAAACG CAGCTGTTCGAAACTATCGCTGCCATTTCATATAATGGTGATCCAAGAATGGTTCTTCCTGCGGAAAATCGTGGA AAGGTTGGGAATATTGTTCGTAAACAGGGACCGCAATTTAAAGAATTGTATCAACGACTTCTGGTTGGACTTCCT GGGACTCATTGGCCGACACATTTGAATGGAATCAAACAAGACACGAGTCCCCATGCCAGAACCTATCATCTTCGC AAATTACCGCATAACTTGCTGATTCGGGTCCGGAGTCGGTTTTCGGAAAGAGGTGTGAGTGAAGAATTGTTGAAA GAGGATGAGAATGCCTATTGGTTAAAGTTGACCGCGGATGAAGAAGTGTTGAGGAAGGTGATTATGGAGGAAATA GGTAAGATTGTTAGGGGTCCTGCGACGGTGCAGTCGATGAAGGGAATTGTAACGGCTGGCATCGGGAAGAGCATC AAGTATGGTACGACGAAGATTGGCAAGTGGTGGAGCGGTTCGTGA |
| Gene | >Agabi119p4|101310 ATGCTCGCCGCTGCAGCTCGAAGGCCATCGCTCGCCACCGTCGTCCTCGTCCGCCGCTTTGCTACAGAACCAGTC GCTGCAGGCAGTAACTCTCATTCCTCGTCGCCCCCTCCACCACTCCCGACTTCCAAACCCCGATCTCACCTCTAT CCTCATCCTCGACCCGCTAAATCTCAGCAGCTACCCCGCAATTCTAATTTACCCCGACTACCTCCTACATTTGGT CGTAATCAACTGTTACCCGTGACAGATGCCACACGAGCGCTGCTAGAGGATGTCGTGGCCAAGTTCAACGCACCT ATACGATATGCCTTTGCGTATGGGTCAGGGGTGTTCGAGCAAGATGGCCGGGAACAAGATGCCGAAACACCGATG TTGGATTTTATGTTCGCAGTGACCCATCCAGCACATTTTCACTATATCAATATGCAACAGTACCCGGCACATTAC CCCATGCACGCGAGAATGCTTGGGTCGAGTTATGTCGAGAGAGTAGAGGATATAGGGCCAGGAGTATGGTTCAAT GCCTACGTCCCTATGAACGGTAAAGTAAGCTATCTATTTCGTCTCTTCCTCCCTGTCCATCTTTTCGCGAGCTTG TTGAGCGGAGGGTCGGGAAGTGTTCGTGTCGCCGAGCTGACTCGCGGAATTTTGATCCGATTAGGTGATCAAATA CGGTGTCACCAGCATTGATAACCTATGCAACGATCTACTCAATTGGCGTACTTTATACCTGGCCGGTCGCATGCA CAAGCCTCTACGGATCATCAAAGACGATGCTCGTGTGCGATTAACCCAACAAGTCAACCTCACGTCCGCAGTACG CGCGGCACTCCTTACACTCCCGGATCAATTCTCGGAAACGCAGCTGTTCGAAACTATCGCTGCCATTTCATATAA TGGTGATCCAAGAATGGTTCTTCCTGCGGAAAATCGTGGAAAGGTTGGGAATATTGTTCGTAAACAGGGACCGCA ATTTAAAGAATTGTATCAACGACTTCTGGTTGGACTTCCTGGGACTCATTGGCCGACACATTTGAATGGAATCAA ACAAGACACGAGTCCCCATGCCAGAACCTATCATCTTCGCAAATTACCGCATAACTTGCTGATTCGGGTCCGGAG TCGGTTTTCGGAAAGAGGTGTGAGTGAAGAATTGTTGAAAGAGGATGAGAATGCCTATTGGTTAAAGTTGACCGC GGATGAAGAAGTGTTGAGGAAGGTGATTATGGAGGAAATAGGTAAGATTGTTAGGGGTCCTGCGACGGTGCAGTC GATGAAGGGAATTGTAACGGCTGGCATCGGGAAGAGCATCAAGTATGGTACGACGAAGATTGGCAAGTGGTGGAG CGGTTCGTGA |