© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Agabi119p4|100230 |
| Gene name | |
| Location | scaffold_07:773014..774508 |
| Strand | + |
| Gene length (bp) | 1494 |
| Transcript length (bp) | 1287 |
| Coding sequence length (bp) | 1287 |
| Protein length (aa) | 429 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01753 | zf-MYND | MYND finger | 1.6E-07 | 51 | 91 |
| PF00856 | SET | SET domain | 9.2E-07 | 22 | 231 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q6GN68|SMY2B_XENLA | N-lysine methyltransferase SMYD2-B OS=Xenopus laevis GN=smyd2-b PE=2 SV=1 | 22 | 257 | 2.0E-19 |
| sp|E1C5V0|SMYD2_CHICK | N-lysine methyltransferase SMYD2 OS=Gallus gallus GN=SMYD2 PE=3 SV=1 | 22 | 257 | 6.0E-19 |
| sp|Q7ZXV5|SMY2A_XENLA | N-lysine methyltransferase SMYD2-A OS=Xenopus laevis GN=smyd2-a PE=2 SV=1 | 22 | 257 | 3.0E-18 |
| sp|Q8R5A0|SMYD2_MOUSE | N-lysine methyltransferase SMYD2 OS=Mus musculus GN=Smyd2 PE=1 SV=1 | 29 | 257 | 2.0E-17 |
| sp|Q7M6Z3|SMYD2_RAT | N-lysine methyltransferase SMYD2 OS=Rattus norvegicus GN=Smyd2 PE=1 SV=1 | 29 | 257 | 7.0E-17 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q6GN68|SMY2B_XENLA | N-lysine methyltransferase SMYD2-B OS=Xenopus laevis GN=smyd2-b PE=2 SV=1 | 22 | 257 | 2.0E-19 |
| sp|E1C5V0|SMYD2_CHICK | N-lysine methyltransferase SMYD2 OS=Gallus gallus GN=SMYD2 PE=3 SV=1 | 22 | 257 | 6.0E-19 |
| sp|Q7ZXV5|SMY2A_XENLA | N-lysine methyltransferase SMYD2-A OS=Xenopus laevis GN=smyd2-a PE=2 SV=1 | 22 | 257 | 3.0E-18 |
| sp|Q8R5A0|SMYD2_MOUSE | N-lysine methyltransferase SMYD2 OS=Mus musculus GN=Smyd2 PE=1 SV=1 | 29 | 257 | 2.0E-17 |
| sp|Q7M6Z3|SMYD2_RAT | N-lysine methyltransferase SMYD2 OS=Rattus norvegicus GN=Smyd2 PE=1 SV=1 | 29 | 257 | 7.0E-17 |
| sp|Q9NRG4|SMYD2_HUMAN | N-lysine methyltransferase SMYD2 OS=Homo sapiens GN=SMYD2 PE=1 SV=2 | 26 | 257 | 2.0E-16 |
| sp|Q0P585|SMYD2_BOVIN | N-lysine methyltransferase SMYD2 OS=Bos taurus GN=SMYD2 PE=2 SV=1 | 26 | 257 | 4.0E-16 |
| sp|C3RZA1|SMYD2_PIG | N-lysine methyltransferase SMYD2 OS=Sus scrofa GN=SMYD2 PE=2 SV=1 | 26 | 257 | 1.0E-15 |
| sp|Q7XJS0|ASHR1_ARATH | Histone-lysine N-methyltransferase ASHR1 OS=Arabidopsis thaliana GN=ASHR1 PE=2 SV=2 | 29 | 371 | 7.0E-15 |
| sp|Q5RGL7|SMY2B_DANRE | N-lysine methyltransferase SMYD2-B OS=Danio rerio GN=smyd2b PE=2 SV=2 | 23 | 257 | 2.0E-14 |
| sp|Q5BJI7|SMY2A_DANRE | N-lysine methyltransferase SMYD2-A OS=Danio rerio GN=smyd2a PE=2 SV=1 | 22 | 419 | 2.0E-14 |
| sp|Q9CWR2|SMYD3_MOUSE | Histone-lysine N-methyltransferase SMYD3 OS=Mus musculus GN=Smyd3 PE=2 SV=1 | 47 | 258 | 1.0E-12 |
| sp|Q9H7B4|SMYD3_HUMAN | Histone-lysine N-methyltransferase SMYD3 OS=Homo sapiens GN=SMYD3 PE=1 SV=4 | 47 | 368 | 2.0E-12 |
| sp|Q5ZIZ2|SMYD5_CHICK | SET and MYND domain-containing protein 5 OS=Gallus gallus GN=SMYD5 PE=2 SV=1 | 155 | 257 | 2.0E-10 |
| sp|Q6GMV2|SMYD5_HUMAN | SET and MYND domain-containing protein 5 OS=Homo sapiens GN=SMYD5 PE=1 SV=2 | 155 | 257 | 8.0E-10 |
| sp|Q3TYX3|SMYD5_MOUSE | SET and MYND domain-containing protein 5 OS=Mus musculus GN=Smyd5 PE=1 SV=2 | 155 | 257 | 2.0E-09 |
| sp|Q6GPQ4|SMYD5_XENLA | SET and MYND domain-containing protein 5 OS=Xenopus laevis GN=smyd5 PE=2 SV=1 | 153 | 273 | 3.0E-08 |
| sp|Q5PP37|ATXR2_ARATH | Histone-lysine N-methyltransferase ATXR2 OS=Arabidopsis thaliana GN=ATXR2 PE=2 SV=1 | 180 | 257 | 9.0E-07 |
| sp|A3M0J3|SET5_PICST | Potential protein lysine methyltransferase SET5 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) GN=SET5 PE=3 SV=2 | 175 | 303 | 3.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005515 | protein binding | Yes |
| GO:0003674 | molecular_function | No |
| GO:0005488 | binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 42 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Agabi119p4|100230 MDVTFKNIKLVPHPTARSQAISTKKISAGSVVVSVPAFTSALLEAEKGQRCDTCFRLPPDGEKLKKCTGCASYFY CDIRCQKVQWDLEHKRQFSQHERMDVILLSHFLGRTLKTKPVSSADNSHDPFSIFLSLLPGSHASQRTLDSIPKS LILDDSLVQDIYSRFGNNNFTIHSHLNSIGHGVFPLASRLFNHSCIPNAAPRYVQGPAQPVLMEVVALRDTDVGE EICIPYLDPALTQSRSQIFQYTYGFTCQCSSCRDISQLGQIPKPPDSSETMSSLGDELREYVGVSDVLGAELPTP SLSDLPLGLRCALHESYMEQLSEQFSKASHEGDYNTAFGSGLILLALYLLIYPTNYPQIGLHLLELAKTHWNALI TMETSGVGAEIRSQVRIFLSHANRILRIYGKEGDEHGPLDELVKLDELLSADT* |
| Coding | >Agabi119p4|100230 ATGGATGTCACATTCAAAAACATCAAACTTGTTCCACATCCTACCGCTCGGTCGCAGGCTATTTCCACTAAAAAA ATATCTGCTGGATCAGTCGTGGTGTCAGTACCAGCCTTTACTTCCGCCTTACTTGAAGCCGAAAAGGGACAGAGA TGTGATACCTGTTTTCGTTTACCACCTGACGGTGAAAAACTGAAGAAGTGCACCGGGTGTGCCTCGTATTTCTAC TGTGATATCAGATGCCAGAAGGTACAATGGGACTTGGAGCATAAGCGCCAATTTTCACAACATGAGCGCATGGAT GTCATACTCTTATCGCACTTCCTCGGGCGAACTCTGAAGACGAAACCCGTTTCATCGGCAGATAACTCTCACGAT CCATTTTCAATATTCCTCTCGCTCCTTCCTGGTTCTCATGCATCCCAAAGAACACTAGACTCAATTCCGAAATCT CTGATTCTTGATGACAGTCTTGTCCAAGATATCTATTCTCGCTTTGGCAACAATAATTTTACCATCCATTCGCAT TTGAACTCTATCGGCCACGGTGTTTTCCCTCTGGCAAGCCGATTGTTCAATCATTCTTGCATTCCAAACGCCGCA CCAAGATATGTGCAGGGCCCCGCTCAACCCGTTCTTATGGAGGTAGTTGCACTTCGTGACACCGACGTCGGGGAA GAGATCTGTATTCCCTATCTGGATCCCGCCCTGACCCAGTCCCGGAGTCAAATTTTTCAATACACTTACGGATTT ACTTGCCAATGCAGTTCTTGTAGGGATATAAGCCAACTGGGGCAGATACCAAAGCCACCGGACTCTTCAGAAACG ATGTCGTCTCTCGGTGACGAGCTACGAGAGTACGTGGGGGTGTCTGATGTACTGGGCGCGGAACTTCCTACACCC TCCCTTTCCGACCTTCCACTCGGGCTACGATGTGCATTGCACGAATCTTATATGGAACAGCTATCAGAACAATTC AGCAAAGCCTCTCACGAGGGGGACTATAATACCGCTTTTGGAAGTGGTCTTATTTTGCTAGCCCTGTATCTCTTG ATATATCCGACAAATTATCCACAGATCGGATTGCACCTCTTAGAATTGGCAAAGACACACTGGAATGCACTAATT ACGATGGAAACCTCAGGCGTGGGGGCAGAGATCAGGAGTCAAGTGAGGATTTTCTTGAGCCATGCCAACAGAATA TTGCGGATATATGGTAAAGAAGGAGATGAGCACGGTCCCCTTGATGAACTCGTGAAACTAGATGAGCTCTTGTCC GCGGATACTTGA |
| Transcript | >Agabi119p4|100230 ATGGATGTCACATTCAAAAACATCAAACTTGTTCCACATCCTACCGCTCGGTCGCAGGCTATTTCCACTAAAAAA ATATCTGCTGGATCAGTCGTGGTGTCAGTACCAGCCTTTACTTCCGCCTTACTTGAAGCCGAAAAGGGACAGAGA TGTGATACCTGTTTTCGTTTACCACCTGACGGTGAAAAACTGAAGAAGTGCACCGGGTGTGCCTCGTATTTCTAC TGTGATATCAGATGCCAGAAGGTACAATGGGACTTGGAGCATAAGCGCCAATTTTCACAACATGAGCGCATGGAT GTCATACTCTTATCGCACTTCCTCGGGCGAACTCTGAAGACGAAACCCGTTTCATCGGCAGATAACTCTCACGAT CCATTTTCAATATTCCTCTCGCTCCTTCCTGGTTCTCATGCATCCCAAAGAACACTAGACTCAATTCCGAAATCT CTGATTCTTGATGACAGTCTTGTCCAAGATATCTATTCTCGCTTTGGCAACAATAATTTTACCATCCATTCGCAT TTGAACTCTATCGGCCACGGTGTTTTCCCTCTGGCAAGCCGATTGTTCAATCATTCTTGCATTCCAAACGCCGCA CCAAGATATGTGCAGGGCCCCGCTCAACCCGTTCTTATGGAGGTAGTTGCACTTCGTGACACCGACGTCGGGGAA GAGATCTGTATTCCCTATCTGGATCCCGCCCTGACCCAGTCCCGGAGTCAAATTTTTCAATACACTTACGGATTT ACTTGCCAATGCAGTTCTTGTAGGGATATAAGCCAACTGGGGCAGATACCAAAGCCACCGGACTCTTCAGAAACG ATGTCGTCTCTCGGTGACGAGCTACGAGAGTACGTGGGGGTGTCTGATGTACTGGGCGCGGAACTTCCTACACCC TCCCTTTCCGACCTTCCACTCGGGCTACGATGTGCATTGCACGAATCTTATATGGAACAGCTATCAGAACAATTC AGCAAAGCCTCTCACGAGGGGGACTATAATACCGCTTTTGGAAGTGGTCTTATTTTGCTAGCCCTGTATCTCTTG ATATATCCGACAAATTATCCACAGATCGGATTGCACCTCTTAGAATTGGCAAAGACACACTGGAATGCACTAATT ACGATGGAAACCTCAGGCGTGGGGGCAGAGATCAGGAGTCAAGTGAGGATTTTCTTGAGCCATGCCAACAGAATA TTGCGGATATATGGTAAAGAAGGAGATGAGCACGGTCCCCTTGATGAACTCGTGAAACTAGATGAGCTCTTGTCC GCGGATACTTGA |
| Gene | >Agabi119p4|100230 ATGGATGTCACATTCAAAAACATCAAACTTGTTCCACATCCTACCGCTCGGTCGCAGGCTATTTCCACTAAAAAA ATATCTGCTGGATCAGTCGTGGTGTCAGTACCAGCCTTTACTTCCGCCTTACTTGAAGCCGAAAAGGGACAGAGA TGTGATACCTGTTTTCGTTTACCACCTGACGGTGAAAAACTGAAGAAGTGCACCGGGTGTGCCTCGTATTTCTAC TGTGATATCAGATGTTAGGCCTTTATTGTTCTCAGTCAGCATACTATGCTGACTTTCGTATCCACAGGCCAGAAG GTACAATGGGACTTGGAGCATAAGCGCGTATGTAAGAGTTATAGCCTGATGATATCCTACCTTCATGGCCAGCAA TTTTCACAACATGAGCGCATGGATGTCATACTCTTATCGCACTTCCTCGGGCGAACTCTGAAGACGAAACCCGTT TCATCGGCAGATAACTCTCACGATCCATTTTCAATATTCCTCTCGCTCCTTCCTGGTTCTCATGCATCCCAAAGA ACACTAGACTCAATTCCGAAATCTCTGATTCTTGATGACAGTCTTGTCCAAGATATCTATTCTCGCTTTGGCAAC AATAATTTTACCATCCATTCGCATTTGAACTCTATCGGCCACGGTGTTTTCCCTCTGGCAAGCCGATTGTTCAAT CATTCTTGCATTCCAAACGCCGCACCAAGATATGTGCAGGGCCCCGCTCAACCCGTTCTTATGGAGGTAGTTGCA CTTCGTGACACCGACGTCGGGGAAGAGGTCAGACAGGTCAGGTCTCGACCTTGCTAATACAAATTAACCTGTTTT AAAGATCTGTATTCCCTATCTGGATCCCGCCCTGACCCAGTCCCGGAGTCAAATTTTTCAATACACTTACGGATT TACTTGCCAATGCAGTTCTTGTAGGGATATAAGCCAACTGGGGCAGATACCAAAGCCACCGGACTCTTCAGAAAC GATGTCGTCTCTCGGTGACGAGCTACGAGAGTACGTGGGGGTGTCTGATGTACTGGGCGCGGAACTTCCTACACC CTCCCTTTCCGACCTTCCACTCGGGCTACGATGTGCATTGCACGAATCTTATATGGAACAGCTATCAGAACAATT CAGCAAAGCCTCTCACGAGGGGGACTATAATACCGCTTTTGGAAGTGGTCTTATTTTGCTAGCCCTGTATCTCTT GATATATCCGACAAATTATCCACAGATCGGTGAGTTATATCTACCTCAGATCATATTCTATGCGGCGGATGAACA ATAATTTTAGGATTGCACCTCTTAGAATTGGCAAAGACACACTGGAATGCACTAATTACGATGGAAACCTCAGGC GTGGGGGCAGAGATCAGGAGTCAAGTGAGGATTTTCTTGAGCCATGCCAACAGAATATTGCGGATATATGGTAAA GAAGGAGATGAGCACGGTCCCCTTGATGAACTCGTGAAACTAGATGAGCTCTTGTCCGCGGATACTTGA |