© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Agabi119p4|100000 |
| Gene name | |
| Location | scaffold_07:704362..706434 |
| Strand | + |
| Gene length (bp) | 2072 |
| Transcript length (bp) | 1881 |
| Coding sequence length (bp) | 1881 |
| Protein length (aa) | 627 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07647 | SAM_2 | SAM domain (Sterile alpha motif) | 2.1E-07 | 550 | 607 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q4P965|VTS1_USTMA | Protein VTS1 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=VTS1 PE=3 SV=1 | 11 | 314 | 3.0E-66 |
| sp|Q5BGC4|VTS1_EMENI | Protein vts1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=vts1 PE=3 SV=1 | 29 | 299 | 3.0E-37 |
| sp|Q4WJS2|VTS1_ASPFU | Protein vts1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=vts1 PE=3 SV=2 | 29 | 155 | 1.0E-36 |
| sp|Q7RZQ3|VTS1_NEUCR | Protein VTS1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=vts1 PE=3 SV=3 | 30 | 299 | 9.0E-36 |
| sp|Q6CHK0|VTS1_YARLI | Protein VTS1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=VTS1 PE=3 SV=1 | 60 | 134 | 2.0E-23 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q4P965|VTS1_USTMA | Protein VTS1 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=VTS1 PE=3 SV=1 | 11 | 314 | 3.0E-66 |
| sp|Q5BGC4|VTS1_EMENI | Protein vts1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=vts1 PE=3 SV=1 | 29 | 299 | 3.0E-37 |
| sp|Q4WJS2|VTS1_ASPFU | Protein vts1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=vts1 PE=3 SV=2 | 29 | 155 | 1.0E-36 |
| sp|Q7RZQ3|VTS1_NEUCR | Protein VTS1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=vts1 PE=3 SV=3 | 30 | 299 | 9.0E-36 |
| sp|Q6CHK0|VTS1_YARLI | Protein VTS1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=VTS1 PE=3 SV=1 | 60 | 134 | 2.0E-23 |
| sp|Q7RZQ3|VTS1_NEUCR | Protein VTS1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=vts1 PE=3 SV=3 | 543 | 609 | 8.0E-21 |
| sp|Q4IBN1|VTS1_GIBZE | Protein VTS1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=VTS1 PE=3 SV=1 | 543 | 608 | 1.0E-20 |
| sp|Q6CHK0|VTS1_YARLI | Protein VTS1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=VTS1 PE=3 SV=1 | 546 | 608 | 6.0E-20 |
| sp|Q4WJS2|VTS1_ASPFU | Protein vts1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=vts1 PE=3 SV=2 | 543 | 608 | 2.0E-18 |
| sp|Q5BGC4|VTS1_EMENI | Protein vts1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=vts1 PE=3 SV=1 | 543 | 608 | 4.0E-18 |
| sp|Q758Y4|VTS1_ASHGO | Protein VTS1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=VTS1 PE=3 SV=2 | 546 | 609 | 2.0E-17 |
| sp|Q5AI80|VTS1_CANAL | Protein VTS1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=VTS1 PE=3 SV=1 | 550 | 611 | 5.0E-17 |
| sp|Q6BSL1|VTS1_DEBHA | Protein VTS1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=VTS1 PE=3 SV=2 | 547 | 609 | 3.0E-16 |
| sp|Q6CY29|VTS1_KLULA | Protein VTS1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=VTS1 PE=3 SV=1 | 510 | 609 | 5.0E-16 |
| sp|Q6FM94|VTS1_CANGA | Protein VTS1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=VTS1 PE=3 SV=1 | 546 | 608 | 9.0E-16 |
| sp|Q08831|VTS1_YEAST | Protein VTS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VTS1 PE=1 SV=1 | 546 | 607 | 2.0E-15 |
| sp|Q9P6R7|VTS1_SCHPO | Protein vts1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC13E7.03c PE=1 SV=1 | 508 | 607 | 7.0E-14 |
| sp|B5DF21|SMAG1_RAT | Protein Smaug homolog 1 OS=Rattus norvegicus GN=Samd4a PE=1 SV=1 | 551 | 613 | 4.0E-07 |
| sp|Q0IHW3|SMAG1_XENTR | Protein Smaug homolog 1 OS=Xenopus tropicalis GN=samd4a PE=2 SV=1 | 551 | 613 | 5.0E-07 |
| sp|Q8CBY1|SMAG1_MOUSE | Protein Smaug homolog 1 OS=Mus musculus GN=Samd4a PE=1 SV=2 | 551 | 613 | 6.0E-07 |
| sp|Q9UPU9|SMAG1_HUMAN | Protein Smaug homolog 1 OS=Homo sapiens GN=SAMD4A PE=1 SV=3 | 551 | 613 | 6.0E-07 |
| sp|Q95LV5|SMAG1_MACFA | Protein Smaug homolog 1 OS=Macaca fascicularis GN=SAMD4A PE=2 SV=2 | 551 | 613 | 7.0E-07 |
| sp|Q80XS6|SMAG2_MOUSE | Protein Smaug homolog 2 OS=Mus musculus GN=Samd4b PE=2 SV=1 | 551 | 613 | 3.0E-06 |
| sp|Q5FWP2|SMAG1_XENLA | Protein Smaug homolog 1 OS=Xenopus laevis GN=samd4a PE=2 SV=1 | 551 | 613 | 4.0E-06 |
| sp|Q5PRF9|SMAG2_HUMAN | Protein Smaug homolog 2 OS=Homo sapiens GN=SAMD4B PE=1 SV=1 | 551 | 613 | 4.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005515 | protein binding | Yes |
| GO:0003674 | molecular_function | No |
| GO:0005488 | binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 13 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Agabi119p4|100000 MLSPSPDSAKAVARQSLGRATPTLVPASPRPASHSNTRPTSELPLGSAGIFQTPEAEALDQWFENLQNYEATLEE MAAASLDVDFKEELGAIEQWFKVLSEAERTAALYSLLQHSTQVQIRFFITVLQQMARSDPMTALLSPAMGSMQNQ MEASLARIKSPGLKSNMPASPTTRNFNPNRQSLIFDNFLSPDSAATNAASDAAATLAQQRARLKNAEHRISAPVL ASAAANGRASWAPTSSLPQVSEASAPAQEILIGASRPKSGDFSGTSPSPRLSGGSPNEGQSWASMVNTPAIPLFP KNTRAADSANTQLNEWNQTSGPGVPRMGDPTVYRKKPVSGDKQNENGNHQHYDDNGNLVNQDARGRRNASGGWGG RSQAPPTMNSNPANNRFNNNGDEANGMNGLGMQLGGLHLGMGSPQMHGMPPAAAAAALANMAGPMSPFNMNMLSA IALSPEAQLLAAQVAAANAQGYGHPGWLGMPSMSAGVNPHGGGSAVGGNNNRRGGGNPPSGRSTTGFRSAAPSVG SNAIANINNNNNNTPKGEEEVDPALLNDIPAWLRSLRLHKYTPNFEGMRWQDIVVMDEGELEGKGVAALGARRKM LKTFEVVRRKMGMEGVSGETGNANGV* |
| Coding | >Agabi119p4|100000 ATGCTCAGTCCGTCCCCTGACTCTGCAAAGGCCGTCGCTCGCCAGTCCCTGGGCCGTGCAACCCCCACCCTCGTC CCAGCCTCGCCACGCCCAGCATCCCACTCCAACACCAGACCCACCAGCGAGCTCCCCCTCGGCAGCGCAGGCATC TTCCAGACCCCAGAAGCCGAGGCCCTCGACCAGTGGTTTGAAAATTTGCAAAATTATGAAGCTACCCTCGAGGAA ATGGCCGCCGCCTCTCTCGATGTCGACTTCAAAGAGGAGCTCGGCGCCATCGAGCAATGGTTTAAAGTTCTCTCA GAAGCAGAGCGCACAGCCGCTCTTTACAGTCTTCTCCAGCATTCTACCCAAGTTCAGATTCGTTTTTTCATCACC GTCCTCCAGCAGATGGCCCGTTCAGACCCAATGACCGCCCTTCTCAGCCCTGCCATGGGATCAATGCAAAACCAA ATGGAAGCCAGCCTTGCTCGGATCAAGTCCCCTGGCCTCAAATCCAATATGCCCGCCTCTCCCACCACCCGCAAT TTCAACCCCAACCGCCAATCCCTCATCTTTGACAACTTTCTCTCTCCCGATTCCGCTGCCACAAATGCCGCATCA GATGCCGCCGCTACCCTCGCACAACAGCGTGCCAGGTTGAAAAACGCCGAGCACCGCATCTCGGCTCCTGTTTTG GCATCCGCCGCCGCCAATGGTCGCGCGTCTTGGGCTCCTACCTCCTCCCTCCCTCAGGTTTCAGAGGCGAGCGCC CCCGCCCAGGAAATTCTCATCGGCGCTTCTCGCCCCAAGAGCGGTGACTTTTCTGGTACTTCGCCCTCACCTCGC CTCAGCGGAGGTTCTCCCAACGAAGGTCAAAGCTGGGCCAGCATGGTCAACACCCCTGCCATCCCCCTCTTCCCC AAGAACACCCGAGCTGCAGATTCCGCCAATACACAGTTGAACGAGTGGAACCAGACTTCTGGACCTGGCGTCCCA CGTATGGGTGATCCTACCGTTTATCGCAAGAAACCCGTTTCGGGCGATAAACAAAATGAAAATGGTAACCATCAA CATTATGATGATAACGGTAATTTGGTCAATCAAGACGCTCGTGGTCGTCGAAATGCCAGTGGAGGTTGGGGTGGT AGGAGCCAGGCGCCTCCTACCATGAACTCCAACCCAGCCAACAATCGCTTCAACAACAACGGTGATGAAGCAAAC GGTATGAACGGTCTTGGTATGCAGCTGGGTGGACTTCATCTGGGTATGGGGTCACCACAAATGCATGGTATGCCA CCGGCTGCTGCTGCTGCTGCATTGGCGAATATGGCTGGACCGATGAGTCCATTCAATATGAATATGTTGAGTGCT ATAGCACTCTCACCTGAAGCTCAGCTGCTTGCGGCACAAGTGGCGGCTGCGAACGCTCAAGGTTACGGACATCCA GGATGGTTGGGTATGCCATCGATGTCTGCTGGAGTTAACCCACATGGCGGTGGATCAGCTGTGGGTGGGAATAAT AATCGACGTGGAGGAGGAAATCCACCTTCGGGTCGATCTACCACTGGATTCCGAAGTGCTGCTCCTAGTGTGGGG TCCAATGCGATAGCCAACATCAATAATAATAATAATAATACGCCGAAGGGAGAAGAAGAGGTGGATCCGGCGTTG TTGAATGATATACCTGCGTGGTTGAGGAGTTTGAGGTTGCATAAGTATACACCGAATTTTGAAGGGATGAGGTGG CAGGATATTGTGGTTATGGATGAGGGGGAGTTGGAGGGGAAGGGGGTTGCGGCGTTGGGGGCGAGGAGGAAGATG TTGAAGACGTTTGAGGTTGTGAGGAGGAAGATGGGGATGGAGGGTGTATCGGGTGAGACTGGGAATGCGAATGGG GTTTGA |
| Transcript | >Agabi119p4|100000 ATGCTCAGTCCGTCCCCTGACTCTGCAAAGGCCGTCGCTCGCCAGTCCCTGGGCCGTGCAACCCCCACCCTCGTC CCAGCCTCGCCACGCCCAGCATCCCACTCCAACACCAGACCCACCAGCGAGCTCCCCCTCGGCAGCGCAGGCATC TTCCAGACCCCAGAAGCCGAGGCCCTCGACCAGTGGTTTGAAAATTTGCAAAATTATGAAGCTACCCTCGAGGAA ATGGCCGCCGCCTCTCTCGATGTCGACTTCAAAGAGGAGCTCGGCGCCATCGAGCAATGGTTTAAAGTTCTCTCA GAAGCAGAGCGCACAGCCGCTCTTTACAGTCTTCTCCAGCATTCTACCCAAGTTCAGATTCGTTTTTTCATCACC GTCCTCCAGCAGATGGCCCGTTCAGACCCAATGACCGCCCTTCTCAGCCCTGCCATGGGATCAATGCAAAACCAA ATGGAAGCCAGCCTTGCTCGGATCAAGTCCCCTGGCCTCAAATCCAATATGCCCGCCTCTCCCACCACCCGCAAT TTCAACCCCAACCGCCAATCCCTCATCTTTGACAACTTTCTCTCTCCCGATTCCGCTGCCACAAATGCCGCATCA GATGCCGCCGCTACCCTCGCACAACAGCGTGCCAGGTTGAAAAACGCCGAGCACCGCATCTCGGCTCCTGTTTTG GCATCCGCCGCCGCCAATGGTCGCGCGTCTTGGGCTCCTACCTCCTCCCTCCCTCAGGTTTCAGAGGCGAGCGCC CCCGCCCAGGAAATTCTCATCGGCGCTTCTCGCCCCAAGAGCGGTGACTTTTCTGGTACTTCGCCCTCACCTCGC CTCAGCGGAGGTTCTCCCAACGAAGGTCAAAGCTGGGCCAGCATGGTCAACACCCCTGCCATCCCCCTCTTCCCC AAGAACACCCGAGCTGCAGATTCCGCCAATACACAGTTGAACGAGTGGAACCAGACTTCTGGACCTGGCGTCCCA CGTATGGGTGATCCTACCGTTTATCGCAAGAAACCCGTTTCGGGCGATAAACAAAATGAAAATGGTAACCATCAA CATTATGATGATAACGGTAATTTGGTCAATCAAGACGCTCGTGGTCGTCGAAATGCCAGTGGAGGTTGGGGTGGT AGGAGCCAGGCGCCTCCTACCATGAACTCCAACCCAGCCAACAATCGCTTCAACAACAACGGTGATGAAGCAAAC GGTATGAACGGTCTTGGTATGCAGCTGGGTGGACTTCATCTGGGTATGGGGTCACCACAAATGCATGGTATGCCA CCGGCTGCTGCTGCTGCTGCATTGGCGAATATGGCTGGACCGATGAGTCCATTCAATATGAATATGTTGAGTGCT ATAGCACTCTCACCTGAAGCTCAGCTGCTTGCGGCACAAGTGGCGGCTGCGAACGCTCAAGGTTACGGACATCCA GGATGGTTGGGTATGCCATCGATGTCTGCTGGAGTTAACCCACATGGCGGTGGATCAGCTGTGGGTGGGAATAAT AATCGACGTGGAGGAGGAAATCCACCTTCGGGTCGATCTACCACTGGATTCCGAAGTGCTGCTCCTAGTGTGGGG TCCAATGCGATAGCCAACATCAATAATAATAATAATAATACGCCGAAGGGAGAAGAAGAGGTGGATCCGGCGTTG TTGAATGATATACCTGCGTGGTTGAGGAGTTTGAGGTTGCATAAGTATACACCGAATTTTGAAGGGATGAGGTGG CAGGATATTGTGGTTATGGATGAGGGGGAGTTGGAGGGGAAGGGGGTTGCGGCGTTGGGGGCGAGGAGGAAGATG TTGAAGACGTTTGAGGTTGTGAGGAGGAAGATGGGGATGGAGGGTGTATCGGGTGAGACTGGGAATGCGAATGGG GTTTGA |
| Gene | >Agabi119p4|100000 ATGCTCAGTCCGTCCCCTGACTCTGCAAAGGCCGTCGCTCGCCAGTCCCTGGGCCGTGCAACCCCCACCCTCGTC CCAGCCTCGCCACGCCCAGCATCCCACTCCAACACCAGACCCACCAGCGAGCTCCCCCTCGGCAGCGCAGGCATC TTCCAGACCCCAGAAGGTATGTGGCGATTTTATCATTCTTATCTTTCTCACCGTCCATTCAGCCGAGGCCCTCGA CCAGTGGTTTGAAAATTTGCAAAATTATGAAGCTACCCTCGTACGTCTCTCACAATTTTCACTTTCCGCCGCTCA CACGCCCCCCAGGAGGAAATGGCCGCCGCCTCTCTCGATGTCGACTTCAAAGAGGAGCTCGGCGCCATCGAGCAA TGTACGTCGTCTTCCCCTCACCCCTTCTGTCCTAACATCCCCCACAGGGTTTAAAGTTCTCTCAGAAGCAGAGCG CACAGCCGCTCTTTACAGTCTTCTCCAGCATTCTACCCAAGTTCAGATTCGTTTTTTCATCACCGTCCTCCAGCA GATGGCCCGTTCAGACCCAATGACCGCCCTTCTCAGCCCTGCCATGGGTAAGCATCACCCACATCAATCCCATCA CCCCTAACCACCGCCCTCACACAGGATCAATGCAAAACCAAATGGAAGCCAGCCTTGCTCGGATCAAGTCCCCTG GCCTCAAATCCAATATGCCCGCCTCTCCCACCACCCGCAATTTCAACCCCAACCGCCAATCCCTCATCTTTGACA ACTTTCTCTCTCCCGATTCCGCTGCCACAAATGCCGCATCAGATGCCGCCGCTACCCTCGCACAACAGCGTGCCA GGTTGAAAAACGCCGAGCACCGCATCTCGGCTCCTGTTTTGGCATCCGCCGCCGCCAATGGTCGCGCGTCTTGGG CTCCTACCTCCTCCCTCCCTCAGGTTTCAGAGGCGAGCGCCCCCGCCCAGGAAATTCTCATCGGCGCTTCTCGCC CCAAGAGCGGTGACTTTTCTGGTACTTCGCCCTCACCTCGCCTCAGCGGAGGTTCTCCCAACGAAGGTCAAAGCT GGGCCAGCATGGTCAACACCCCTGCCATCCCCCTCTTCCCCAAGAACACCCGAGCTGCAGATTCCGCCAATACAC AGTTGAACGAGTGGAACCAGACTTCTGGACCTGGCGTCCCACGTATGGGTGATCCTACCGTTTATCGCAAGAAAC CCGTTTCGGGCGATAAACAAAATGAAAATGGTAACCATCAACATTATGATGATAACGGTAATTTGGTCAATCAAG ACGCTCGTGGTCGTCGAAATGCCAGTGGAGGTTGGGGTGGTAGGAGCCAGGCGCCTCCTACCATGAACTCCAACC CAGCCAACAATCGCTTCAACAACAACGGTGATGAAGCAAACGGTATGAACGGTCTTGGTATGCAGCTGGGTGGAC TTCATCTGGGTATGGGGTCACCACAAATGCATGGTATGCCACCGGCTGCTGCTGCTGCTGCATTGGCGAATATGG CTGGACCGATGAGTCCATTCAATATGAATATGTTGAGTGCTATAGCACTCTCACCTGAAGCTCAGCTGCTTGCGG CACAAGTGGCGGCTGCGAACGCTCAAGGTTACGGACATCCAGGATGGTTGGGTATGCCATCGATGTCTGCTGGAG TTAACCCACATGGCGGTGGATCAGCTGTGGGTGGGAATAATAATCGACGTGGAGGAGGAAATCCACCTTCGGGTC GATCTACCACTGGATTCCGAAGTGCTGCTCCTAGTGTGGGGTCCAATGCGATAGCCAACATCAATAATAATAATA ATAATACGCCGAAGGGAGAAGAAGAGGTGGATCCGGCGTTGTTGAATGATATACCTGCGTGGTTGAGGAGTTTGA GGTTGCATAAGTATACACCGAATTTTGAAGGGATGAGGTGGCAGGATATTGTGGTTATGGATGAGGGGGAGTTGG AGGGGAAGGGGGTTGCGGCGTTGGGGGCGAGGAGGAAGATGTTGAAGACGTTTGAGGTTGTGAGGAGGAAGATGG GGATGGAGGGTGTATCGGGTGAGACTGGGAATGCGAATGGGGTTTGA |