© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Agabi119p4|099580 |
| Gene name | |
| Location | scaffold_07:623266..624024 |
| Strand | + |
| Gene length (bp) | 758 |
| Transcript length (bp) | 702 |
| Coding sequence length (bp) | 702 |
| Protein length (aa) | 234 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13649 | Methyltransf_25 | Methyltransferase domain | 7.6E-22 | 63 | 162 |
| PF13847 | Methyltransf_31 | Methyltransferase domain | 7.9E-19 | 58 | 179 |
| PF08241 | Methyltransf_11 | Methyltransferase domain | 1.8E-18 | 64 | 166 |
| PF13489 | Methyltransf_23 | Methyltransferase domain | 7.5E-15 | 48 | 180 |
| PF08242 | Methyltransf_12 | Methyltransferase domain | 4.7E-12 | 64 | 164 |
| PF02353 | CMAS | Mycolic acid cyclopropane synthetase | 2.3E-11 | 51 | 174 |
| PF05175 | MTS | Methyltransferase small domain | 3.5E-10 | 53 | 164 |
| PF01209 | Ubie_methyltran | ubiE/COQ5 methyltransferase family | 5.4E-10 | 56 | 178 |
| PF01135 | PCMT | Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) | 2.4E-08 | 43 | 133 |
| PF05958 | tRNA_U5-meth_tr | tRNA (Uracil-5-)-methyltransferase | 1.5E-05 | 60 | 122 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9M571|PEAMT_SPIOL | Phosphoethanolamine N-methyltransferase OS=Spinacia oleracea GN=PEAMT PE=1 SV=1 | 59 | 169 | 8.0E-09 |
| sp|Q944H0|PEAM2_ARATH | Phosphomethylethanolamine N-methyltransferase OS=Arabidopsis thaliana GN=NMT2 PE=2 SV=2 | 59 | 169 | 3.0E-08 |
| sp|O66128|MENG_MICLU | Demethylmenaquinone methyltransferase OS=Micrococcus luteus GN=menG PE=3 SV=1 | 49 | 203 | 2.0E-07 |
| sp|E5KIC0|CYPM_STRSQ | Cypemycin N-terminal methyltransferase OS=Streptomyces sp. GN=cypM PE=1 SV=1 | 27 | 173 | 3.0E-07 |
| sp|C6E228|CMOA_GEOSM | tRNA (cmo5U34)-methyltransferase OS=Geobacter sp. (strain M21) GN=cmoA PE=3 SV=1 | 60 | 198 | 3.0E-07 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9M571|PEAMT_SPIOL | Phosphoethanolamine N-methyltransferase OS=Spinacia oleracea GN=PEAMT PE=1 SV=1 | 59 | 169 | 8.0E-09 |
| sp|Q944H0|PEAM2_ARATH | Phosphomethylethanolamine N-methyltransferase OS=Arabidopsis thaliana GN=NMT2 PE=2 SV=2 | 59 | 169 | 3.0E-08 |
| sp|O66128|MENG_MICLU | Demethylmenaquinone methyltransferase OS=Micrococcus luteus GN=menG PE=3 SV=1 | 49 | 203 | 2.0E-07 |
| sp|E5KIC0|CYPM_STRSQ | Cypemycin N-terminal methyltransferase OS=Streptomyces sp. GN=cypM PE=1 SV=1 | 27 | 173 | 3.0E-07 |
| sp|C6E228|CMOA_GEOSM | tRNA (cmo5U34)-methyltransferase OS=Geobacter sp. (strain M21) GN=cmoA PE=3 SV=1 | 60 | 198 | 3.0E-07 |
| sp|D5DIV9|BIOC_BACMD | Malonyl-[acyl-carrier protein] O-methyltransferase OS=Bacillus megaterium (strain DSM 319) GN=bioC PE=3 SV=1 | 20 | 168 | 3.0E-07 |
| sp|L7IP31|ERG6_MAGOY | Sterol 24-C-methyltransferase OS=Magnaporthe oryzae (strain Y34) GN=ERG6 PE=2 SV=1 | 49 | 164 | 5.0E-07 |
| sp|P0CT10|ERG6_MAGO7 | Sterol 24-C-methyltransferase OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=ERG6 PE=3 SV=1 | 49 | 164 | 5.0E-07 |
| sp|Q9P7L6|METL_SCHPO | Uncharacterized methyltransferase-like protein SPBC21C3.07c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC21C3.07c PE=3 SV=2 | 52 | 166 | 7.0E-07 |
| sp|Q3ED65|MENG_ARATH | 2-phytyl-1,4-beta-naphthoquinone methyltransferase, chloroplastic OS=Arabidopsis thaliana GN=MENG PE=1 SV=2 | 58 | 202 | 7.0E-07 |
| sp|P54458|YQEM_BACSU | Putative methyltransferase YqeM OS=Bacillus subtilis (strain 168) GN=yqeM PE=3 SV=1 | 57 | 170 | 8.0E-07 |
| sp|Q9M571|PEAMT_SPIOL | Phosphoethanolamine N-methyltransferase OS=Spinacia oleracea GN=PEAMT PE=1 SV=1 | 43 | 167 | 1.0E-06 |
| sp|Q9FR44|PEAM1_ARATH | Phosphoethanolamine N-methyltransferase 1 OS=Arabidopsis thaliana GN=NMT1 PE=1 SV=1 | 14 | 169 | 2.0E-06 |
| sp|Q9C6B9|PEAM3_ARATH | Phosphoethanolamine N-methyltransferase 3 OS=Arabidopsis thaliana GN=NMT3 PE=2 SV=2 | 57 | 165 | 3.0E-06 |
| sp|Q9P3R1|ERG6_NEUCR | Sterol 24-C-methyltransferase erg-4 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=erg-4 PE=3 SV=1 | 46 | 164 | 6.0E-06 |
| sp|C1DHS2|UBIE_AZOVD | Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=ubiE PE=3 SV=1 | 54 | 165 | 7.0E-06 |
| sp|A3QEP9|CMOA_SHELP | tRNA (cmo5U34)-methyltransferase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=cmoA PE=3 SV=1 | 61 | 174 | 7.0E-06 |
| sp|Q9FR44|PEAM1_ARATH | Phosphoethanolamine N-methyltransferase 1 OS=Arabidopsis thaliana GN=NMT1 PE=1 SV=1 | 43 | 167 | 8.0E-06 |
| sp|A6VDI6|UBIE_PSEA7 | Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE OS=Pseudomonas aeruginosa (strain PA7) GN=ubiE PE=3 SV=1 | 54 | 165 | 8.0E-06 |
| sp|C6CWS7|BIOC_PAESJ | Malonyl-[acyl-carrier protein] O-methyltransferase OS=Paenibacillus sp. (strain JDR-2) GN=bioC PE=3 SV=1 | 62 | 168 | 8.0E-06 |
| sp|Q9HUC0|UBIE_PSEAE | Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=ubiE PE=3 SV=1 | 54 | 165 | 9.0E-06 |
| sp|Q02EV4|UBIE_PSEAB | Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=ubiE PE=3 SV=1 | 54 | 165 | 9.0E-06 |
| sp|B7V3F6|UBIE_PSEA8 | Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE OS=Pseudomonas aeruginosa (strain LESB58) GN=ubiE PE=3 SV=1 | 54 | 165 | 9.0E-06 |
| sp|O05972|Y028_RICPR | Uncharacterized protein RP028 OS=Rickettsia prowazekii (strain Madrid E) GN=RP028 PE=4 SV=1 | 59 | 171 | 9.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0008168 | methyltransferase activity | Yes |
| GO:0008173 | RNA methyltransferase activity | Yes |
| GO:0006396 | RNA processing | Yes |
| GO:0006725 | cellular aromatic compound metabolic process | No |
| GO:0003674 | molecular_function | No |
| GO:0016740 | transferase activity | No |
| GO:0008152 | metabolic process | No |
| GO:0046483 | heterocycle metabolic process | No |
| GO:0090304 | nucleic acid metabolic process | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:1901360 | organic cyclic compound metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0009987 | cellular process | No |
| GO:0016741 | transferase activity, transferring one-carbon groups | No |
| GO:0016070 | RNA metabolic process | No |
| GO:0140640 | catalytic activity, acting on a nucleic acid | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0003824 | catalytic activity | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0140098 | catalytic activity, acting on RNA | No |
| GO:0006139 | nucleobase-containing compound metabolic process | No |
| GO:0034641 | cellular nitrogen compound metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 28 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Agabi119p4|099580 MSRNAAPIILRPPEDDIEKRHLVARGYDQCAVTYFNWQRARKMPTEEAYLQKLLNRLKQGSRVLELGCGPGVPFT KMLAEAHERKLEIVAVDVSASQVNLAQQTIQKNEFPNVKFVRADMTEIGFNRMHFDAVVSFYTWFHLPKEEQGAM AERITRWLKPGGILLFNTSSVAEEIVWQNWMGVNMYINSLGVKGTLDLLKEYARELEVTDEIVSEKVGNQEENFL WIWAVKRL* |
| Coding | >Agabi119p4|099580 ATGTCCAGAAATGCAGCTCCGATAATTCTTCGCCCCCCTGAAGATGATATCGAGAAAAGGCATCTTGTGGCGCGA GGCTACGATCAATGCGCAGTAACCTATTTTAACTGGCAGAGAGCTCGAAAGATGCCCACAGAAGAAGCGTATCTC CAGAAACTCCTCAACCGACTCAAGCAGGGATCGCGTGTTCTGGAATTAGGTTGTGGACCTGGCGTTCCTTTCACC AAAATGCTGGCCGAAGCCCATGAAAGAAAACTTGAAATCGTAGCAGTCGACGTCTCCGCTTCTCAAGTGAATTTA GCGCAACAGACTATCCAAAAGAATGAATTTCCGAATGTCAAGTTTGTTCGTGCGGATATGACGGAAATAGGATTC AATCGAATGCATTTCGATGCTGTGGTGTCGTTTTATACGTGGTTCCATTTACCCAAGGAAGAACAGGGAGCTATG GCAGAGAGGATTACGAGGTGGTTGAAACCTGGAGGAATCTTATTGTTCAACACCTCGAGTGTTGCGGAAGAGATA GTTTGGCAGAACTGGATGGGCGTCAACATGTATATCAATTCCTTGGGTGTCAAGGGGACTTTGGACTTGTTAAAG GAATACGCGAGAGAGTTGGAAGTGACGGATGAGATTGTGTCTGAGAAGGTGGGGAATCAAGAGGAGAACTTTCTT TGGATATGGGCTGTCAAGAGATTGTAA |
| Transcript | >Agabi119p4|099580 ATGTCCAGAAATGCAGCTCCGATAATTCTTCGCCCCCCTGAAGATGATATCGAGAAAAGGCATCTTGTGGCGCGA GGCTACGATCAATGCGCAGTAACCTATTTTAACTGGCAGAGAGCTCGAAAGATGCCCACAGAAGAAGCGTATCTC CAGAAACTCCTCAACCGACTCAAGCAGGGATCGCGTGTTCTGGAATTAGGTTGTGGACCTGGCGTTCCTTTCACC AAAATGCTGGCCGAAGCCCATGAAAGAAAACTTGAAATCGTAGCAGTCGACGTCTCCGCTTCTCAAGTGAATTTA GCGCAACAGACTATCCAAAAGAATGAATTTCCGAATGTCAAGTTTGTTCGTGCGGATATGACGGAAATAGGATTC AATCGAATGCATTTCGATGCTGTGGTGTCGTTTTATACGTGGTTCCATTTACCCAAGGAAGAACAGGGAGCTATG GCAGAGAGGATTACGAGGTGGTTGAAACCTGGAGGAATCTTATTGTTCAACACCTCGAGTGTTGCGGAAGAGATA GTTTGGCAGAACTGGATGGGCGTCAACATGTATATCAATTCCTTGGGTGTCAAGGGGACTTTGGACTTGTTAAAG GAATACGCGAGAGAGTTGGAAGTGACGGATGAGATTGTGTCTGAGAAGGTGGGGAATCAAGAGGAGAACTTTCTT TGGATATGGGCTGTCAAGAGATTGTAA |
| Gene | >Agabi119p4|099580 ATGTCCAGAAATGCAGCTCCGATAATTCTTCGCCCCCCTGAAGAGTGAGTATAGTTGTGGATGTCACCAAGCAAA AGCACTCACCTAGTCATTTTCGAAGTGATATCGAGAAAAGGCATCTTGTGGCGCGAGGCTACGATCAATGCGCAG TAACCTATTTTAACTGGCAGAGAGCTCGAAAGATGCCCACAGAAGAAGCGTATCTCCAGAAACTCCTCAACCGAC TCAAGCAGGGATCGCGTGTTCTGGAATTAGGTTGTGGACCTGGCGTTCCTTTCACCAAAATGCTGGCCGAAGCCC ATGAAAGAAAACTTGAAATCGTAGCAGTCGACGTCTCCGCTTCTCAAGTGAATTTAGCGCAACAGACTATCCAAA AGAATGAATTTCCGAATGTCAAGTTTGTTCGTGCGGATATGACGGAAATAGGATTCAATCGAATGCATTTCGATG CTGTGGTGTCGTTTTATACGTGGTTCCATTTACCCAAGGAAGAACAGGGAGCTATGGCAGAGAGGATTACGAGGT GGTTGAAACCTGGAGGAATCTTATTGTTCAACACCTCGAGTGTTGCGGAAGAGATAGTTTGGCAGAACTGGATGG GCGTCAACATGTATATCAATTCCTTGGGTGTCAAGGGGACTTTGGACTTGTTAAAGGAATACGCGAGAGAGTTGG AAGTGACGGATGAGATTGTGTCTGAGAAGGTGGGGAATCAAGAGGAGAACTTTCTTTGGATATGGGCTGTCAAGA GATTGTAA |