Protein ID | Agabi119p4|099190 |
Gene name | |
Location | scaffold_07:520645..524042 |
Strand | + |
Gene length (bp) | 3397 |
Transcript length (bp) | 2586 |
Coding sequence length (bp) | 2586 |
Protein length (aa) | 862 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF04082 | Fungal_trans | Fungal specific transcription factor domain | 2.1E-15 | 298 | 470 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q09922|YAKB_SCHPO | Uncharacterized transcriptional regulatory protein C1F7.11c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1F7.11c PE=3 SV=1 | 48 | 652 | 4.0E-24 |
sp|P36598|THI1_SCHPO | Thiamine repressible genes regulatory protein thi1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=thi1 PE=1 SV=2 | 58 | 469 | 4.0E-09 |
sp|O59741|YN25_SCHPO | Uncharacterized transcriptional regulatory protein C530.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC530.05 PE=3 SV=2 | 53 | 465 | 5.0E-08 |
GO Term | Description | Terminal node |
---|---|---|
GO:0008270 | zinc ion binding | Yes |
GO:0003677 | DNA binding | Yes |
GO:0006351 | transcription, DNA-templated | Yes |
GO:0006807 | nitrogen compound metabolic process | No |
GO:0046872 | metal ion binding | No |
GO:1901360 | organic cyclic compound metabolic process | No |
GO:0044271 | cellular nitrogen compound biosynthetic process | No |
GO:0044238 | primary metabolic process | No |
GO:0005488 | binding | No |
GO:1901576 | organic substance biosynthetic process | No |
GO:0009059 | macromolecule biosynthetic process | No |
GO:0006725 | cellular aromatic compound metabolic process | No |
GO:0090304 | nucleic acid metabolic process | No |
GO:0046483 | heterocycle metabolic process | No |
GO:0003676 | nucleic acid binding | No |
GO:0097659 | nucleic acid-templated transcription | No |
GO:0044249 | cellular biosynthetic process | No |
GO:0008152 | metabolic process | No |
GO:0032774 | RNA biosynthetic process | No |
GO:0003674 | molecular_function | No |
GO:0019438 | aromatic compound biosynthetic process | No |
GO:0034641 | cellular nitrogen compound metabolic process | No |
GO:0046914 | transition metal ion binding | No |
GO:0006139 | nucleobase-containing compound metabolic process | No |
GO:0043170 | macromolecule metabolic process | No |
GO:1901363 | heterocyclic compound binding | No |
GO:0043167 | ion binding | No |
GO:0044237 | cellular metabolic process | No |
GO:0018130 | heterocycle biosynthetic process | No |
GO:0008150 | biological_process | No |
GO:1901362 | organic cyclic compound biosynthetic process | No |
GO:0071704 | organic substance metabolic process | No |
GO:0016070 | RNA metabolic process | No |
GO:0009987 | cellular process | No |
GO:0009058 | biosynthetic process | No |
GO:0097159 | organic cyclic compound binding | No |
GO:0034654 | nucleobase-containing compound biosynthetic process | No |
GO:0043169 | cation binding | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 14 | 0.45 |
Transcription Factor Class (based on PFAM domains) |
---|
Fungal Specific TF |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Agabi119p4|099190 MSDSAQRPAKRPRKAEDFPHELPPQRPSQHDPQPHIDHIFIADGLLNKKPGGKKAPLSCCECRRLKLKCDRNFPC ASCKKRGCAEICPDGVLVSGKGTRFILANTEQLHSKIQEMSDRIRNLEDAVRVTNPGSPLLATDLMSIKSTMGLY SSNGGQESDGRKTNNVPSDAEHHRILNTGKAPAEDSAMRVDSSLCTAKGNTITFDLTAIQSDISHLSSSFPLSSS HQNTPERNVAMREHIRSQLPSRAEAQRLWDQARRNALWQYNPHPSVTFFPNLLHHIYSSSSDKSPKPITDIDPRR LALLLMILAVACVVDVPSTSDSPTGSSNQSASSNPMHAAHLEAEARASRYHDLGRASLCEIPIMEETNVDTVLAL FYEVWFLAVWSDGKKAVGEAWGIMGLVAKLAQSIGLHRSGGKSKVIPEEVEKRRALFWELLYLDARLSLSLGRPP SLSIHHMDCPRPSYAPDDEFELCESPHYFQEWKHTSYQQFLVPVLDAISKPGLDYKSVLELDRRIRDFAVPLPLR NKEKCASRNLALQRASMGTAVEAVLLQLHRSYFIRALSGPEEAFNRRHKYAPSVVAVFLSASRMIATIQELFQKE PELTSRILWYWSNAFSAAIALCLLVSRAPFTCLSPAALQDLQRARLLFRAGKEICPRASQVLPILETMVDKANDI YFRWSNGQELPTIVLRHITEDGTSYTAGDEHDNERRSPSVPPEDAFLYTHQSLAQCIAEVHQIARTMFPLRKPCN CSSRTAQQPNANGANSIGKQGVAVPPNSSRSSPSTTMMAQPDCPPSHEWSPPPIINGASPVLPEAPPEWEDEWNI FVFEFVGEWDESESESAGVWTTTHGGCDVCEWDADV* |
Coding | >Agabi119p4|099190 ATGTCCGACTCTGCCCAGCGTCCAGCAAAGCGGCCGCGCAAGGCTGAGGACTTTCCCCATGAACTCCCCCCACAA CGCCCTTCACAGCACGACCCCCAGCCGCACATCGACCACATCTTCATTGCCGACGGCCTCCTCAACAAGAAACCC GGTGGAAAAAAGGCCCCCCTCTCCTGCTGCGAATGCCGTCGACTCAAGCTCAAGTGCGATCGCAATTTTCCTTGC GCCTCTTGCAAGAAACGAGGTTGCGCCGAAATATGTCCTGACGGTGTTCTCGTGTCTGGAAAGGGCACGCGTTTT ATTCTCGCAAACACAGAACAACTACACTCCAAGATTCAAGAAATGAGCGACCGAATTCGCAATCTCGAGGACGCA GTTCGGGTCACCAACCCAGGTTCTCCTCTCCTGGCTACTGATCTCATGTCCATCAAGAGCACTATGGGTCTTTAC TCCAGCAATGGTGGACAGGAAAGTGATGGTCGGAAAACCAACAATGTTCCTTCGGACGCTGAACACCACAGGATC TTGAATACAGGCAAGGCCCCCGCTGAAGACTCCGCAATGCGCGTCGACTCGTCCTTGTGTACCGCCAAGGGTAAT ACAATTACTTTTGATCTGACGGCGATACAATCCGATATCAGTCACCTAAGTTCTTCTTTCCCCCTGTCCAGCTCG CATCAAAATACGCCAGAACGTAATGTTGCAATGCGAGAGCACATTCGCTCTCAGCTACCGTCGCGTGCTGAAGCT CAGCGACTTTGGGACCAGGCCCGGCGAAACGCACTCTGGCAATACAATCCCCATCCCTCTGTAACTTTCTTCCCT AACCTCCTGCACCACATCTACTCCTCTTCTTCGGACAAATCACCGAAACCTATTACAGATATCGATCCTCGTCGG TTAGCTCTCCTATTAATGATCCTGGCGGTGGCATGTGTCGTCGACGTTCCCTCTACTTCCGACTCTCCTACTGGC TCGTCAAACCAGTCGGCATCTTCCAACCCTATGCACGCAGCCCACCTTGAAGCAGAAGCACGAGCGTCTCGATAT CATGATCTCGGCCGTGCCTCCCTGTGTGAAATTCCAATAATGGAAGAGACGAATGTGGATACCGTTCTTGCGTTG TTCTATGAAGTATGGTTTCTTGCTGTCTGGAGTGACGGGAAAAAGGCTGTTGGAGAGGCGTGGGGAATCATGGGA CTTGTGGCAAAATTGGCACAAAGCATTGGTCTACATCGCAGTGGAGGAAAATCAAAGGTAATACCGGAGGAGGTA GAAAAACGGAGGGCGCTATTCTGGGAACTATTGTATCTTGATGCCAGACTGTCGTTGTCTCTTGGCCGACCCCCT TCACTGTCGATTCACCATATGGATTGTCCACGACCGTCTTATGCCCCTGATGACGAGTTTGAACTTTGCGAGTCA CCACACTATTTCCAGGAATGGAAACATACTTCTTATCAGCAATTCTTAGTCCCGGTACTCGACGCCATTTCCAAG CCAGGGCTTGACTACAAATCAGTACTTGAACTGGACCGGCGTATTCGTGACTTTGCTGTACCGCTTCCTTTGAGA AACAAGGAAAAGTGTGCGTCAAGAAATCTTGCTTTACAGCGAGCTTCCATGGGTACTGCAGTTGAAGCTGTGTTA CTTCAGCTCCACCGATCATACTTTATTCGCGCTCTCAGTGGGCCCGAAGAGGCTTTTAATCGACGGCACAAATAT GCACCATCCGTCGTAGCGGTGTTCTTGAGTGCTTCGAGGATGATAGCGACCATTCAAGAACTTTTCCAGAAGGAA CCGGAGCTGACGTCGCGAATACTTTGGTATTGGTCGAATGCGTTCTCGGCTGCCATCGCTTTGTGTTTGTTGGTA TCTAGAGCGCCTTTTACTTGTTTGTCACCCGCGGCCCTACAGGATCTGCAAAGGGCAAGGTTGTTGTTCAGAGCT GGGAAGGAGATTTGTCCTCGAGCTTCTCAAGTTCTTCCAATACTAGAAACCATGGTTGATAAGGCCAATGACATA TACTTCCGCTGGTCAAACGGGCAAGAACTTCCGACGATTGTTCTTCGCCATATCACGGAGGATGGCACTTCCTAT ACCGCTGGAGACGAACATGATAACGAACGTCGATCGCCTTCTGTTCCACCGGAGGATGCCTTCTTGTATACCCAT CAAAGTTTAGCGCAATGCATCGCGGAGGTGCATCAAATTGCAAGAACCATGTTTCCGTTGAGGAAGCCTTGCAAT TGTTCCAGTCGAACGGCACAGCAGCCGAATGCGAATGGAGCGAATAGTATCGGGAAGCAGGGTGTTGCTGTTCCT CCTAATAGTTCAAGGTCGAGTCCATCTACGACGATGATGGCGCAACCAGACTGTCCGCCTTCGCATGAATGGAGT CCGCCGCCGATTATCAATGGGGCGTCTCCTGTTTTACCAGAAGCTCCGCCCGAATGGGAGGATGAATGGAACATC TTCGTATTCGAGTTTGTCGGGGAGTGGGATGAGTCCGAGTCCGAGTCCGCCGGTGTATGGACAACAACACATGGC GGGTGCGACGTTTGCGAATGGGACGCCGACGTATAA |
Transcript | >Agabi119p4|099190 ATGTCCGACTCTGCCCAGCGTCCAGCAAAGCGGCCGCGCAAGGCTGAGGACTTTCCCCATGAACTCCCCCCACAA CGCCCTTCACAGCACGACCCCCAGCCGCACATCGACCACATCTTCATTGCCGACGGCCTCCTCAACAAGAAACCC GGTGGAAAAAAGGCCCCCCTCTCCTGCTGCGAATGCCGTCGACTCAAGCTCAAGTGCGATCGCAATTTTCCTTGC GCCTCTTGCAAGAAACGAGGTTGCGCCGAAATATGTCCTGACGGTGTTCTCGTGTCTGGAAAGGGCACGCGTTTT ATTCTCGCAAACACAGAACAACTACACTCCAAGATTCAAGAAATGAGCGACCGAATTCGCAATCTCGAGGACGCA GTTCGGGTCACCAACCCAGGTTCTCCTCTCCTGGCTACTGATCTCATGTCCATCAAGAGCACTATGGGTCTTTAC TCCAGCAATGGTGGACAGGAAAGTGATGGTCGGAAAACCAACAATGTTCCTTCGGACGCTGAACACCACAGGATC TTGAATACAGGCAAGGCCCCCGCTGAAGACTCCGCAATGCGCGTCGACTCGTCCTTGTGTACCGCCAAGGGTAAT ACAATTACTTTTGATCTGACGGCGATACAATCCGATATCAGTCACCTAAGTTCTTCTTTCCCCCTGTCCAGCTCG CATCAAAATACGCCAGAACGTAATGTTGCAATGCGAGAGCACATTCGCTCTCAGCTACCGTCGCGTGCTGAAGCT CAGCGACTTTGGGACCAGGCCCGGCGAAACGCACTCTGGCAATACAATCCCCATCCCTCTGTAACTTTCTTCCCT AACCTCCTGCACCACATCTACTCCTCTTCTTCGGACAAATCACCGAAACCTATTACAGATATCGATCCTCGTCGG TTAGCTCTCCTATTAATGATCCTGGCGGTGGCATGTGTCGTCGACGTTCCCTCTACTTCCGACTCTCCTACTGGC TCGTCAAACCAGTCGGCATCTTCCAACCCTATGCACGCAGCCCACCTTGAAGCAGAAGCACGAGCGTCTCGATAT CATGATCTCGGCCGTGCCTCCCTGTGTGAAATTCCAATAATGGAAGAGACGAATGTGGATACCGTTCTTGCGTTG TTCTATGAAGTATGGTTTCTTGCTGTCTGGAGTGACGGGAAAAAGGCTGTTGGAGAGGCGTGGGGAATCATGGGA CTTGTGGCAAAATTGGCACAAAGCATTGGTCTACATCGCAGTGGAGGAAAATCAAAGGTAATACCGGAGGAGGTA GAAAAACGGAGGGCGCTATTCTGGGAACTATTGTATCTTGATGCCAGACTGTCGTTGTCTCTTGGCCGACCCCCT TCACTGTCGATTCACCATATGGATTGTCCACGACCGTCTTATGCCCCTGATGACGAGTTTGAACTTTGCGAGTCA CCACACTATTTCCAGGAATGGAAACATACTTCTTATCAGCAATTCTTAGTCCCGGTACTCGACGCCATTTCCAAG CCAGGGCTTGACTACAAATCAGTACTTGAACTGGACCGGCGTATTCGTGACTTTGCTGTACCGCTTCCTTTGAGA AACAAGGAAAAGTGTGCGTCAAGAAATCTTGCTTTACAGCGAGCTTCCATGGGTACTGCAGTTGAAGCTGTGTTA CTTCAGCTCCACCGATCATACTTTATTCGCGCTCTCAGTGGGCCCGAAGAGGCTTTTAATCGACGGCACAAATAT GCACCATCCGTCGTAGCGGTGTTCTTGAGTGCTTCGAGGATGATAGCGACCATTCAAGAACTTTTCCAGAAGGAA CCGGAGCTGACGTCGCGAATACTTTGGTATTGGTCGAATGCGTTCTCGGCTGCCATCGCTTTGTGTTTGTTGGTA TCTAGAGCGCCTTTTACTTGTTTGTCACCCGCGGCCCTACAGGATCTGCAAAGGGCAAGGTTGTTGTTCAGAGCT GGGAAGGAGATTTGTCCTCGAGCTTCTCAAGTTCTTCCAATACTAGAAACCATGGTTGATAAGGCCAATGACATA TACTTCCGCTGGTCAAACGGGCAAGAACTTCCGACGATTGTTCTTCGCCATATCACGGAGGATGGCACTTCCTAT ACCGCTGGAGACGAACATGATAACGAACGTCGATCGCCTTCTGTTCCACCGGAGGATGCCTTCTTGTATACCCAT CAAAGTTTAGCGCAATGCATCGCGGAGGTGCATCAAATTGCAAGAACCATGTTTCCGTTGAGGAAGCCTTGCAAT TGTTCCAGTCGAACGGCACAGCAGCCGAATGCGAATGGAGCGAATAGTATCGGGAAGCAGGGTGTTGCTGTTCCT CCTAATAGTTCAAGGTCGAGTCCATCTACGACGATGATGGCGCAACCAGACTGTCCGCCTTCGCATGAATGGAGT CCGCCGCCGATTATCAATGGGGCGTCTCCTGTTTTACCAGAAGCTCCGCCCGAATGGGAGGATGAATGGAACATC TTCGTATTCGAGTTTGTCGGGGAGTGGGATGAGTCCGAGTCCGAGTCCGCCGGTGTATGGACAACAACACATGGC GGGTGCGACGTTTGCGAATGGGACGCCGACGTATAA |
Gene | >Agabi119p4|099190 ATGTCCGACTCTGCCCAGCGTCCAGCAAAGCGGCCGCGCAAGGCTGAGGACTTTCCCCATGAACTCCCCCCACAA CGCCCTTCACAGCACGACCCCCAGCCGCACATCGACCACATCTTCATTGCCGACGGCCTCCTCAACAAGAAACCC GGTGGAAAAAAGGTTTGGTGCCCTCTTTATTCGCGAGCCTGATCTCTAGCTCACCTTTGGGTATCAGGCCCCCCT CTCCTGCTGCGAATGCCGTCGGTGAGCTTTGATAGTCTTCTCTTTTGCCAGTTAGACGCAGCTGATGCCTCTTCA CAAGACTCAAGCTCAAGGTTTCACGTCTTCATATCTAAACACACTACATCATCTAACCCGCCTCTTATTTACTCA GTGCGATCGCAATTTTCCTTGCGCCTCTTGCAAGGTACGGAGCGCTGATATAGTCTCGCGTGTTCGCTCCCCTCA TATATCTTTCTACCCAGAAACGAGGTTGCGCCGAAATATGTCCTGACGGTCAGCGACGCCCTTCAATGCCGTCGC GCAATTGGCTTACACGCTCGAATCTATAGGTGTTCTCGTGTCTGGAAAGGGCACGCGTTTTATTCTCGCAAACAC AGAACAACTACACTCCAAGATTCAAGAAATGAGCGACCGAATTCGCAATCTCGAGGACGCAGTTCGGGTCACCAA CCCAGGTTCTCCTCTCCTGGCTACTGATCTCATGTCCATCAAGAGCACTATGGGTCTTTACTCCAGCAATGGTGG ACAGGAAAGTGATGGTCGGAAAACCAACAATGTTCCTTCGGACGCTGAACACCACAGGATCTTGAATACAGGCAA GGCCCCCGCTGAAGACTCCGCAATGCGCGTCGACTCGTCCTTGTGTACCGCCAAGGTACGTCATTCCGTCAATCC CATATATGCGTCCCTTAACCCAAGTCCTCATTCAGGGTAATACAATTACTTTTGATCTGACGGCGATACAATCCG ATATCAGTCACCTAAGTTCTTCTTTCCCCCTGTCCAGCTCGCATCAAAATACGCCAGAACGTAATGTTGCAATGC GAGAGCACATTCGCTCTCAGCTACCGTCGCGTGCTGAAGCTCAGCGACTTTGGGACCAGGCCCGGCGAAACGCAC TCTGGCAATACAATCCCCATCCCTCTGTAACTTTCTTCCCTAACCTCCTGCACCACATCTACTCCTCTTCTTCGG ACAAATCACCGAAACCTATTACAGATATCGATCCTCGTCGGTTAGCTCTCCTATTAATGATCCTGGCGGTGGCAT GTGTCGTCGACGTTCCCTCTACTTCCGACTCTCCTACTGGCTCGTCAAACCAGTCGGCATCTTCCAACCCTATGC ACGCAGCCCACCTTGAAGCAGAAGCACGAGCGTCTCGATATCATGATCTCGGCCGTGCCTCCCTGTGTGAAATTC CAATAATGGAAGAGACGAATGTGGATACCGTTCTTGCGTTGTTCTATGAAGTATGGTTTCTTGCTGTCTGGAGTG ACGGGAAAAAGGCTGTTGGAGAGGCGTGGGGAATCATGGGACTTGTGGCAAAATTGGCACAAAGCGTAAGTGATT GCGTTCAGATTTCTTTATCATAAACTGACCTCCGGCACCGAATAGATTGGTCTACGTATGTATACAGCCGTCACA CAAATTTCGCATGACACTGACGTGTTGGAATAGATCGCAGTGGAGGAAAATCAAAGGTAATACCGGAGGAGGTAG AAAAACGGAGGGCGCTATTCTGGGAACTATTGTATCTTGATGCCAGACTGGTGAGTTTGGGAGAGGAGGCGTCCA ACTTGGTCACCTTCTAACTTCCTTTTCAGTCGTTGTCTCTTGGCCGACCCCCTTCACTGTCGATTCACCATATGG ATTGTCCACGACCGTCTTATGCCCCTGATGACGAGTTTGAACTTTGCGAGTCACCACACTATTGTAAGCATCTGA ACCATTTTTGTTAGTGTCATCGTGTTGTTCTGATTAGGCTTTCAGTCCAGGAATGGAAACATACTTCTTATCAGC AATTCTTAGTCCCGGTACTCGACGCCATTTCCAAGCCAGGGCTTGACTACAAATCAGTACTTGAACTGGACCGGC GTATTCGTGACTTTGCTGTACCGCTTCCTTTGAGAAACAAGGAAAAGTGTGCGTCAAGAAATCTTGCTTTACAGC GAGCTTCCATGGGTACTGCAGTTGAAGCTGGTGAGCTCTTCCGACCTTCCATAAATTCCCGACAACTGTCAACTG TCAAATGTCAATCAACAATATTAATACTTCAATTAGTGTTACTTCAGCTCCACCGATCATACTTTATTCGCGCTC TCAGTGGGCCCGAAGAGGCTTTTAATCGACGGCACAAATATGCACCATCCGTCGTAGCGGTGTTCTTGAGTGCTT CGAGGATGATAGCGACCATTCAAGAACTTTTCCAGAAGGAACCGGAGCTGACGTCGCGAATACTTTGGTATTGGT CGAATGCGTTCTCGGCTGCCGTAAGTCGCCAATCACTCCTTTCAGCTGTGATTTTGATCGGAGGTGTTTGTAGAT CGCTTTGTGTTTGTTGGTATCTAGAGCGCCTTTTACTTGTTTGTCACCCGCGGCCCTACAGGATCTGCAAAGGGC AAGGTTGTTGTTCAGAGCTGGGAAGGAGATTTGTCCTCGAGCTTCTCAAGTTCTTGTCAGTATCTCAAAGTTAAA AGCGGTCTTTAAACACTGATGCTCACCGATGTTCTATATAGCCAATACTAGAAACCATGGTTGATAAGGCCAATG ACATATACTTCCGCTGGTCAAACGGGCAAGAACTTCCGACGATTGTTCTTCGCCATATCACGGAGGATGGCACTT CCTATACCGCTGGAGACGAACATGATAACGAACGTCGATCGCCTTCTGTTCCACCGGAGGATGCCTTCTTGTATA CCCATCAAAGTTTAGCGCAATGCATCGCGGAGGTGCATCAAATTGCAAGAACCATGTTTCCGTTGAGGAAGCCTT GCAATTGTTCCAGTCGAACGGCACAGCAGCCGAATGCGAATGGAGCGAATAGTATCGGGAAGCAGGGTGTTGCTG TTCCTCCTAATAGTTCAAGGTCGAGTCCATCTACGACGATGATGGCGCAACCAGACTGTCCGCCTTCGCATGAAT GGAGTCCGCCGCCGATTATCAATGGGGCGTCTCCTGTTTTACCAGAAGCTCCGCCCGTGGGTTATATGGGAAGCG GGCCTGCTGTGGGGATTGGGTATCCGACGTATAACAGGAATGGGAGGATGAATGGAACATCTTCGTATTCGAGTT TGTCGGGGAGTGGGATGAGTCCGAGTCCGAGTCCGCCGGTGTATGGACAACAACACATGGCGGGTGCGACGTTTG CGAATGGGACGCCGACGTATAA |