Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|099190
Gene name
Locationscaffold_07:520645..524042
Strand+
Gene length (bp)3397
Transcript length (bp)2586
Coding sequence length (bp)2586
Protein length (aa) 862

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04082 Fungal_trans Fungal specific transcription factor domain 2.1E-15 298 470

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q09922|YAKB_SCHPO Uncharacterized transcriptional regulatory protein C1F7.11c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1F7.11c PE=3 SV=1 48 652 4.0E-24
sp|P36598|THI1_SCHPO Thiamine repressible genes regulatory protein thi1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=thi1 PE=1 SV=2 58 469 4.0E-09
sp|O59741|YN25_SCHPO Uncharacterized transcriptional regulatory protein C530.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC530.05 PE=3 SV=2 53 465 5.0E-08

GO

GO Term Description Terminal node
GO:0008270 zinc ion binding Yes
GO:0003677 DNA binding Yes
GO:0006351 transcription, DNA-templated Yes
GO:0006807 nitrogen compound metabolic process No
GO:0046872 metal ion binding No
GO:1901360 organic cyclic compound metabolic process No
GO:0044271 cellular nitrogen compound biosynthetic process No
GO:0044238 primary metabolic process No
GO:0005488 binding No
GO:1901576 organic substance biosynthetic process No
GO:0009059 macromolecule biosynthetic process No
GO:0006725 cellular aromatic compound metabolic process No
GO:0090304 nucleic acid metabolic process No
GO:0046483 heterocycle metabolic process No
GO:0003676 nucleic acid binding No
GO:0097659 nucleic acid-templated transcription No
GO:0044249 cellular biosynthetic process No
GO:0008152 metabolic process No
GO:0032774 RNA biosynthetic process No
GO:0003674 molecular_function No
GO:0019438 aromatic compound biosynthetic process No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0046914 transition metal ion binding No
GO:0006139 nucleobase-containing compound metabolic process No
GO:0043170 macromolecule metabolic process No
GO:1901363 heterocyclic compound binding No
GO:0043167 ion binding No
GO:0044237 cellular metabolic process No
GO:0018130 heterocycle biosynthetic process No
GO:0008150 biological_process No
GO:1901362 organic cyclic compound biosynthetic process No
GO:0071704 organic substance metabolic process No
GO:0016070 RNA metabolic process No
GO:0009987 cellular process No
GO:0009058 biosynthetic process No
GO:0097159 organic cyclic compound binding No
GO:0034654 nucleobase-containing compound biosynthetic process No
GO:0043169 cation binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 14 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Fungal Specific TF

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|099190
MSDSAQRPAKRPRKAEDFPHELPPQRPSQHDPQPHIDHIFIADGLLNKKPGGKKAPLSCCECRRLKLKCDRNFPC
ASCKKRGCAEICPDGVLVSGKGTRFILANTEQLHSKIQEMSDRIRNLEDAVRVTNPGSPLLATDLMSIKSTMGLY
SSNGGQESDGRKTNNVPSDAEHHRILNTGKAPAEDSAMRVDSSLCTAKGNTITFDLTAIQSDISHLSSSFPLSSS
HQNTPERNVAMREHIRSQLPSRAEAQRLWDQARRNALWQYNPHPSVTFFPNLLHHIYSSSSDKSPKPITDIDPRR
LALLLMILAVACVVDVPSTSDSPTGSSNQSASSNPMHAAHLEAEARASRYHDLGRASLCEIPIMEETNVDTVLAL
FYEVWFLAVWSDGKKAVGEAWGIMGLVAKLAQSIGLHRSGGKSKVIPEEVEKRRALFWELLYLDARLSLSLGRPP
SLSIHHMDCPRPSYAPDDEFELCESPHYFQEWKHTSYQQFLVPVLDAISKPGLDYKSVLELDRRIRDFAVPLPLR
NKEKCASRNLALQRASMGTAVEAVLLQLHRSYFIRALSGPEEAFNRRHKYAPSVVAVFLSASRMIATIQELFQKE
PELTSRILWYWSNAFSAAIALCLLVSRAPFTCLSPAALQDLQRARLLFRAGKEICPRASQVLPILETMVDKANDI
YFRWSNGQELPTIVLRHITEDGTSYTAGDEHDNERRSPSVPPEDAFLYTHQSLAQCIAEVHQIARTMFPLRKPCN
CSSRTAQQPNANGANSIGKQGVAVPPNSSRSSPSTTMMAQPDCPPSHEWSPPPIINGASPVLPEAPPEWEDEWNI
FVFEFVGEWDESESESAGVWTTTHGGCDVCEWDADV*
Coding >Agabi119p4|099190
ATGTCCGACTCTGCCCAGCGTCCAGCAAAGCGGCCGCGCAAGGCTGAGGACTTTCCCCATGAACTCCCCCCACAA
CGCCCTTCACAGCACGACCCCCAGCCGCACATCGACCACATCTTCATTGCCGACGGCCTCCTCAACAAGAAACCC
GGTGGAAAAAAGGCCCCCCTCTCCTGCTGCGAATGCCGTCGACTCAAGCTCAAGTGCGATCGCAATTTTCCTTGC
GCCTCTTGCAAGAAACGAGGTTGCGCCGAAATATGTCCTGACGGTGTTCTCGTGTCTGGAAAGGGCACGCGTTTT
ATTCTCGCAAACACAGAACAACTACACTCCAAGATTCAAGAAATGAGCGACCGAATTCGCAATCTCGAGGACGCA
GTTCGGGTCACCAACCCAGGTTCTCCTCTCCTGGCTACTGATCTCATGTCCATCAAGAGCACTATGGGTCTTTAC
TCCAGCAATGGTGGACAGGAAAGTGATGGTCGGAAAACCAACAATGTTCCTTCGGACGCTGAACACCACAGGATC
TTGAATACAGGCAAGGCCCCCGCTGAAGACTCCGCAATGCGCGTCGACTCGTCCTTGTGTACCGCCAAGGGTAAT
ACAATTACTTTTGATCTGACGGCGATACAATCCGATATCAGTCACCTAAGTTCTTCTTTCCCCCTGTCCAGCTCG
CATCAAAATACGCCAGAACGTAATGTTGCAATGCGAGAGCACATTCGCTCTCAGCTACCGTCGCGTGCTGAAGCT
CAGCGACTTTGGGACCAGGCCCGGCGAAACGCACTCTGGCAATACAATCCCCATCCCTCTGTAACTTTCTTCCCT
AACCTCCTGCACCACATCTACTCCTCTTCTTCGGACAAATCACCGAAACCTATTACAGATATCGATCCTCGTCGG
TTAGCTCTCCTATTAATGATCCTGGCGGTGGCATGTGTCGTCGACGTTCCCTCTACTTCCGACTCTCCTACTGGC
TCGTCAAACCAGTCGGCATCTTCCAACCCTATGCACGCAGCCCACCTTGAAGCAGAAGCACGAGCGTCTCGATAT
CATGATCTCGGCCGTGCCTCCCTGTGTGAAATTCCAATAATGGAAGAGACGAATGTGGATACCGTTCTTGCGTTG
TTCTATGAAGTATGGTTTCTTGCTGTCTGGAGTGACGGGAAAAAGGCTGTTGGAGAGGCGTGGGGAATCATGGGA
CTTGTGGCAAAATTGGCACAAAGCATTGGTCTACATCGCAGTGGAGGAAAATCAAAGGTAATACCGGAGGAGGTA
GAAAAACGGAGGGCGCTATTCTGGGAACTATTGTATCTTGATGCCAGACTGTCGTTGTCTCTTGGCCGACCCCCT
TCACTGTCGATTCACCATATGGATTGTCCACGACCGTCTTATGCCCCTGATGACGAGTTTGAACTTTGCGAGTCA
CCACACTATTTCCAGGAATGGAAACATACTTCTTATCAGCAATTCTTAGTCCCGGTACTCGACGCCATTTCCAAG
CCAGGGCTTGACTACAAATCAGTACTTGAACTGGACCGGCGTATTCGTGACTTTGCTGTACCGCTTCCTTTGAGA
AACAAGGAAAAGTGTGCGTCAAGAAATCTTGCTTTACAGCGAGCTTCCATGGGTACTGCAGTTGAAGCTGTGTTA
CTTCAGCTCCACCGATCATACTTTATTCGCGCTCTCAGTGGGCCCGAAGAGGCTTTTAATCGACGGCACAAATAT
GCACCATCCGTCGTAGCGGTGTTCTTGAGTGCTTCGAGGATGATAGCGACCATTCAAGAACTTTTCCAGAAGGAA
CCGGAGCTGACGTCGCGAATACTTTGGTATTGGTCGAATGCGTTCTCGGCTGCCATCGCTTTGTGTTTGTTGGTA
TCTAGAGCGCCTTTTACTTGTTTGTCACCCGCGGCCCTACAGGATCTGCAAAGGGCAAGGTTGTTGTTCAGAGCT
GGGAAGGAGATTTGTCCTCGAGCTTCTCAAGTTCTTCCAATACTAGAAACCATGGTTGATAAGGCCAATGACATA
TACTTCCGCTGGTCAAACGGGCAAGAACTTCCGACGATTGTTCTTCGCCATATCACGGAGGATGGCACTTCCTAT
ACCGCTGGAGACGAACATGATAACGAACGTCGATCGCCTTCTGTTCCACCGGAGGATGCCTTCTTGTATACCCAT
CAAAGTTTAGCGCAATGCATCGCGGAGGTGCATCAAATTGCAAGAACCATGTTTCCGTTGAGGAAGCCTTGCAAT
TGTTCCAGTCGAACGGCACAGCAGCCGAATGCGAATGGAGCGAATAGTATCGGGAAGCAGGGTGTTGCTGTTCCT
CCTAATAGTTCAAGGTCGAGTCCATCTACGACGATGATGGCGCAACCAGACTGTCCGCCTTCGCATGAATGGAGT
CCGCCGCCGATTATCAATGGGGCGTCTCCTGTTTTACCAGAAGCTCCGCCCGAATGGGAGGATGAATGGAACATC
TTCGTATTCGAGTTTGTCGGGGAGTGGGATGAGTCCGAGTCCGAGTCCGCCGGTGTATGGACAACAACACATGGC
GGGTGCGACGTTTGCGAATGGGACGCCGACGTATAA
Transcript >Agabi119p4|099190
ATGTCCGACTCTGCCCAGCGTCCAGCAAAGCGGCCGCGCAAGGCTGAGGACTTTCCCCATGAACTCCCCCCACAA
CGCCCTTCACAGCACGACCCCCAGCCGCACATCGACCACATCTTCATTGCCGACGGCCTCCTCAACAAGAAACCC
GGTGGAAAAAAGGCCCCCCTCTCCTGCTGCGAATGCCGTCGACTCAAGCTCAAGTGCGATCGCAATTTTCCTTGC
GCCTCTTGCAAGAAACGAGGTTGCGCCGAAATATGTCCTGACGGTGTTCTCGTGTCTGGAAAGGGCACGCGTTTT
ATTCTCGCAAACACAGAACAACTACACTCCAAGATTCAAGAAATGAGCGACCGAATTCGCAATCTCGAGGACGCA
GTTCGGGTCACCAACCCAGGTTCTCCTCTCCTGGCTACTGATCTCATGTCCATCAAGAGCACTATGGGTCTTTAC
TCCAGCAATGGTGGACAGGAAAGTGATGGTCGGAAAACCAACAATGTTCCTTCGGACGCTGAACACCACAGGATC
TTGAATACAGGCAAGGCCCCCGCTGAAGACTCCGCAATGCGCGTCGACTCGTCCTTGTGTACCGCCAAGGGTAAT
ACAATTACTTTTGATCTGACGGCGATACAATCCGATATCAGTCACCTAAGTTCTTCTTTCCCCCTGTCCAGCTCG
CATCAAAATACGCCAGAACGTAATGTTGCAATGCGAGAGCACATTCGCTCTCAGCTACCGTCGCGTGCTGAAGCT
CAGCGACTTTGGGACCAGGCCCGGCGAAACGCACTCTGGCAATACAATCCCCATCCCTCTGTAACTTTCTTCCCT
AACCTCCTGCACCACATCTACTCCTCTTCTTCGGACAAATCACCGAAACCTATTACAGATATCGATCCTCGTCGG
TTAGCTCTCCTATTAATGATCCTGGCGGTGGCATGTGTCGTCGACGTTCCCTCTACTTCCGACTCTCCTACTGGC
TCGTCAAACCAGTCGGCATCTTCCAACCCTATGCACGCAGCCCACCTTGAAGCAGAAGCACGAGCGTCTCGATAT
CATGATCTCGGCCGTGCCTCCCTGTGTGAAATTCCAATAATGGAAGAGACGAATGTGGATACCGTTCTTGCGTTG
TTCTATGAAGTATGGTTTCTTGCTGTCTGGAGTGACGGGAAAAAGGCTGTTGGAGAGGCGTGGGGAATCATGGGA
CTTGTGGCAAAATTGGCACAAAGCATTGGTCTACATCGCAGTGGAGGAAAATCAAAGGTAATACCGGAGGAGGTA
GAAAAACGGAGGGCGCTATTCTGGGAACTATTGTATCTTGATGCCAGACTGTCGTTGTCTCTTGGCCGACCCCCT
TCACTGTCGATTCACCATATGGATTGTCCACGACCGTCTTATGCCCCTGATGACGAGTTTGAACTTTGCGAGTCA
CCACACTATTTCCAGGAATGGAAACATACTTCTTATCAGCAATTCTTAGTCCCGGTACTCGACGCCATTTCCAAG
CCAGGGCTTGACTACAAATCAGTACTTGAACTGGACCGGCGTATTCGTGACTTTGCTGTACCGCTTCCTTTGAGA
AACAAGGAAAAGTGTGCGTCAAGAAATCTTGCTTTACAGCGAGCTTCCATGGGTACTGCAGTTGAAGCTGTGTTA
CTTCAGCTCCACCGATCATACTTTATTCGCGCTCTCAGTGGGCCCGAAGAGGCTTTTAATCGACGGCACAAATAT
GCACCATCCGTCGTAGCGGTGTTCTTGAGTGCTTCGAGGATGATAGCGACCATTCAAGAACTTTTCCAGAAGGAA
CCGGAGCTGACGTCGCGAATACTTTGGTATTGGTCGAATGCGTTCTCGGCTGCCATCGCTTTGTGTTTGTTGGTA
TCTAGAGCGCCTTTTACTTGTTTGTCACCCGCGGCCCTACAGGATCTGCAAAGGGCAAGGTTGTTGTTCAGAGCT
GGGAAGGAGATTTGTCCTCGAGCTTCTCAAGTTCTTCCAATACTAGAAACCATGGTTGATAAGGCCAATGACATA
TACTTCCGCTGGTCAAACGGGCAAGAACTTCCGACGATTGTTCTTCGCCATATCACGGAGGATGGCACTTCCTAT
ACCGCTGGAGACGAACATGATAACGAACGTCGATCGCCTTCTGTTCCACCGGAGGATGCCTTCTTGTATACCCAT
CAAAGTTTAGCGCAATGCATCGCGGAGGTGCATCAAATTGCAAGAACCATGTTTCCGTTGAGGAAGCCTTGCAAT
TGTTCCAGTCGAACGGCACAGCAGCCGAATGCGAATGGAGCGAATAGTATCGGGAAGCAGGGTGTTGCTGTTCCT
CCTAATAGTTCAAGGTCGAGTCCATCTACGACGATGATGGCGCAACCAGACTGTCCGCCTTCGCATGAATGGAGT
CCGCCGCCGATTATCAATGGGGCGTCTCCTGTTTTACCAGAAGCTCCGCCCGAATGGGAGGATGAATGGAACATC
TTCGTATTCGAGTTTGTCGGGGAGTGGGATGAGTCCGAGTCCGAGTCCGCCGGTGTATGGACAACAACACATGGC
GGGTGCGACGTTTGCGAATGGGACGCCGACGTATAA
Gene >Agabi119p4|099190
ATGTCCGACTCTGCCCAGCGTCCAGCAAAGCGGCCGCGCAAGGCTGAGGACTTTCCCCATGAACTCCCCCCACAA
CGCCCTTCACAGCACGACCCCCAGCCGCACATCGACCACATCTTCATTGCCGACGGCCTCCTCAACAAGAAACCC
GGTGGAAAAAAGGTTTGGTGCCCTCTTTATTCGCGAGCCTGATCTCTAGCTCACCTTTGGGTATCAGGCCCCCCT
CTCCTGCTGCGAATGCCGTCGGTGAGCTTTGATAGTCTTCTCTTTTGCCAGTTAGACGCAGCTGATGCCTCTTCA
CAAGACTCAAGCTCAAGGTTTCACGTCTTCATATCTAAACACACTACATCATCTAACCCGCCTCTTATTTACTCA
GTGCGATCGCAATTTTCCTTGCGCCTCTTGCAAGGTACGGAGCGCTGATATAGTCTCGCGTGTTCGCTCCCCTCA
TATATCTTTCTACCCAGAAACGAGGTTGCGCCGAAATATGTCCTGACGGTCAGCGACGCCCTTCAATGCCGTCGC
GCAATTGGCTTACACGCTCGAATCTATAGGTGTTCTCGTGTCTGGAAAGGGCACGCGTTTTATTCTCGCAAACAC
AGAACAACTACACTCCAAGATTCAAGAAATGAGCGACCGAATTCGCAATCTCGAGGACGCAGTTCGGGTCACCAA
CCCAGGTTCTCCTCTCCTGGCTACTGATCTCATGTCCATCAAGAGCACTATGGGTCTTTACTCCAGCAATGGTGG
ACAGGAAAGTGATGGTCGGAAAACCAACAATGTTCCTTCGGACGCTGAACACCACAGGATCTTGAATACAGGCAA
GGCCCCCGCTGAAGACTCCGCAATGCGCGTCGACTCGTCCTTGTGTACCGCCAAGGTACGTCATTCCGTCAATCC
CATATATGCGTCCCTTAACCCAAGTCCTCATTCAGGGTAATACAATTACTTTTGATCTGACGGCGATACAATCCG
ATATCAGTCACCTAAGTTCTTCTTTCCCCCTGTCCAGCTCGCATCAAAATACGCCAGAACGTAATGTTGCAATGC
GAGAGCACATTCGCTCTCAGCTACCGTCGCGTGCTGAAGCTCAGCGACTTTGGGACCAGGCCCGGCGAAACGCAC
TCTGGCAATACAATCCCCATCCCTCTGTAACTTTCTTCCCTAACCTCCTGCACCACATCTACTCCTCTTCTTCGG
ACAAATCACCGAAACCTATTACAGATATCGATCCTCGTCGGTTAGCTCTCCTATTAATGATCCTGGCGGTGGCAT
GTGTCGTCGACGTTCCCTCTACTTCCGACTCTCCTACTGGCTCGTCAAACCAGTCGGCATCTTCCAACCCTATGC
ACGCAGCCCACCTTGAAGCAGAAGCACGAGCGTCTCGATATCATGATCTCGGCCGTGCCTCCCTGTGTGAAATTC
CAATAATGGAAGAGACGAATGTGGATACCGTTCTTGCGTTGTTCTATGAAGTATGGTTTCTTGCTGTCTGGAGTG
ACGGGAAAAAGGCTGTTGGAGAGGCGTGGGGAATCATGGGACTTGTGGCAAAATTGGCACAAAGCGTAAGTGATT
GCGTTCAGATTTCTTTATCATAAACTGACCTCCGGCACCGAATAGATTGGTCTACGTATGTATACAGCCGTCACA
CAAATTTCGCATGACACTGACGTGTTGGAATAGATCGCAGTGGAGGAAAATCAAAGGTAATACCGGAGGAGGTAG
AAAAACGGAGGGCGCTATTCTGGGAACTATTGTATCTTGATGCCAGACTGGTGAGTTTGGGAGAGGAGGCGTCCA
ACTTGGTCACCTTCTAACTTCCTTTTCAGTCGTTGTCTCTTGGCCGACCCCCTTCACTGTCGATTCACCATATGG
ATTGTCCACGACCGTCTTATGCCCCTGATGACGAGTTTGAACTTTGCGAGTCACCACACTATTGTAAGCATCTGA
ACCATTTTTGTTAGTGTCATCGTGTTGTTCTGATTAGGCTTTCAGTCCAGGAATGGAAACATACTTCTTATCAGC
AATTCTTAGTCCCGGTACTCGACGCCATTTCCAAGCCAGGGCTTGACTACAAATCAGTACTTGAACTGGACCGGC
GTATTCGTGACTTTGCTGTACCGCTTCCTTTGAGAAACAAGGAAAAGTGTGCGTCAAGAAATCTTGCTTTACAGC
GAGCTTCCATGGGTACTGCAGTTGAAGCTGGTGAGCTCTTCCGACCTTCCATAAATTCCCGACAACTGTCAACTG
TCAAATGTCAATCAACAATATTAATACTTCAATTAGTGTTACTTCAGCTCCACCGATCATACTTTATTCGCGCTC
TCAGTGGGCCCGAAGAGGCTTTTAATCGACGGCACAAATATGCACCATCCGTCGTAGCGGTGTTCTTGAGTGCTT
CGAGGATGATAGCGACCATTCAAGAACTTTTCCAGAAGGAACCGGAGCTGACGTCGCGAATACTTTGGTATTGGT
CGAATGCGTTCTCGGCTGCCGTAAGTCGCCAATCACTCCTTTCAGCTGTGATTTTGATCGGAGGTGTTTGTAGAT
CGCTTTGTGTTTGTTGGTATCTAGAGCGCCTTTTACTTGTTTGTCACCCGCGGCCCTACAGGATCTGCAAAGGGC
AAGGTTGTTGTTCAGAGCTGGGAAGGAGATTTGTCCTCGAGCTTCTCAAGTTCTTGTCAGTATCTCAAAGTTAAA
AGCGGTCTTTAAACACTGATGCTCACCGATGTTCTATATAGCCAATACTAGAAACCATGGTTGATAAGGCCAATG
ACATATACTTCCGCTGGTCAAACGGGCAAGAACTTCCGACGATTGTTCTTCGCCATATCACGGAGGATGGCACTT
CCTATACCGCTGGAGACGAACATGATAACGAACGTCGATCGCCTTCTGTTCCACCGGAGGATGCCTTCTTGTATA
CCCATCAAAGTTTAGCGCAATGCATCGCGGAGGTGCATCAAATTGCAAGAACCATGTTTCCGTTGAGGAAGCCTT
GCAATTGTTCCAGTCGAACGGCACAGCAGCCGAATGCGAATGGAGCGAATAGTATCGGGAAGCAGGGTGTTGCTG
TTCCTCCTAATAGTTCAAGGTCGAGTCCATCTACGACGATGATGGCGCAACCAGACTGTCCGCCTTCGCATGAAT
GGAGTCCGCCGCCGATTATCAATGGGGCGTCTCCTGTTTTACCAGAAGCTCCGCCCGTGGGTTATATGGGAAGCG
GGCCTGCTGTGGGGATTGGGTATCCGACGTATAACAGGAATGGGAGGATGAATGGAACATCTTCGTATTCGAGTT
TGTCGGGGAGTGGGATGAGTCCGAGTCCGAGTCCGCCGGTGTATGGACAACAACACATGGCGGGTGCGACGTTTG
CGAATGGGACGCCGACGTATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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