Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|097860
Gene name
Locationscaffold_07:183584..184675
Strand-
Gene length (bp)1091
Transcript length (bp)801
Coding sequence length (bp)801
Protein length (aa) 267

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01012 ETF Electron transfer flavoprotein domain 7.0E-41 35 222

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P38975|ETFB_PARDE Electron transfer flavoprotein subunit beta OS=Paracoccus denitrificans GN=etfB PE=1 SV=1 9 263 5.0E-91
sp|Q68FU3|ETFB_RAT Electron transfer flavoprotein subunit beta OS=Rattus norvegicus GN=Etfb PE=2 SV=3 9 262 3.0E-90
sp|Q2TBV3|ETFB_BOVIN Electron transfer flavoprotein subunit beta OS=Bos taurus GN=ETFB PE=1 SV=3 9 262 3.0E-89
sp|Q9DCW4|ETFB_MOUSE Electron transfer flavoprotein subunit beta OS=Mus musculus GN=Etfb PE=1 SV=3 9 262 3.0E-89
sp|P38117|ETFB_HUMAN Electron transfer flavoprotein subunit beta OS=Homo sapiens GN=ETFB PE=1 SV=3 9 262 1.0E-88
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Swissprot ID Swissprot Description Start End E-value
sp|P38975|ETFB_PARDE Electron transfer flavoprotein subunit beta OS=Paracoccus denitrificans GN=etfB PE=1 SV=1 9 263 5.0E-91
sp|Q68FU3|ETFB_RAT Electron transfer flavoprotein subunit beta OS=Rattus norvegicus GN=Etfb PE=2 SV=3 9 262 3.0E-90
sp|Q2TBV3|ETFB_BOVIN Electron transfer flavoprotein subunit beta OS=Bos taurus GN=ETFB PE=1 SV=3 9 262 3.0E-89
sp|Q9DCW4|ETFB_MOUSE Electron transfer flavoprotein subunit beta OS=Mus musculus GN=Etfb PE=1 SV=3 9 262 3.0E-89
sp|P38117|ETFB_HUMAN Electron transfer flavoprotein subunit beta OS=Homo sapiens GN=ETFB PE=1 SV=3 9 262 1.0E-88
sp|Q6UAQ8|ETFB_PIG Electron transfer flavoprotein subunit beta OS=Sus scrofa GN=ETFB PE=2 SV=3 9 262 2.0E-88
sp|Q5RFK0|ETFB_PONAB Electron transfer flavoprotein subunit beta OS=Pongo abelii GN=ETFB PE=2 SV=3 9 262 5.0E-88
sp|Q9LSW8|ETFB_ARATH Electron transfer flavoprotein subunit beta, mitochondrial OS=Arabidopsis thaliana GN=ETFB PE=1 SV=1 9 260 1.0E-87
sp|P53575|ETFB_BRADU Electron transfer flavoprotein subunit beta OS=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) GN=etfB PE=3 SV=2 9 263 2.0E-86
sp|Q7F9U3|ETFB_ORYSJ Electron transfer flavoprotein subunit beta, mitochondrial OS=Oryza sativa subsp. japonica GN=ETFB PE=3 SV=1 9 259 7.0E-85
sp|A2XQV4|ETFB_ORYSI Electron transfer flavoprotein subunit beta, mitochondrial OS=Oryza sativa subsp. indica GN=ETFB PE=3 SV=1 9 259 2.0E-84
sp|Q54YZ4|ETFB_DICDI Electron transfer flavoprotein subunit beta OS=Dictyostelium discoideum GN=etfb PE=3 SV=1 9 263 4.0E-83
sp|Q9HZP6|ETFB_PSEAE Electron transfer flavoprotein subunit beta OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=etfB PE=3 SV=1 9 259 2.0E-79
sp|P42940|ETFB_YEAST Probable electron transfer flavoprotein subunit beta OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CIR1 PE=1 SV=1 9 260 6.0E-75
sp|Q9UTH2|ETFB_SCHPO Probable electron transfer flavoprotein subunit beta OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1805.02c PE=3 SV=1 9 262 8.0E-66
sp|P94550|ETFB_BACSU Electron transfer flavoprotein subunit beta OS=Bacillus subtilis (strain 168) GN=etfB PE=3 SV=1 9 214 2.0E-30
sp|P53576|FIXA_AZOVI Protein FixA OS=Azotobacter vinelandii GN=fixA PE=3 SV=1 9 226 3.0E-25
sp|P97089|ETFB_THETC Electron transfer flavoprotein subunit beta OS=Thermoanaerobacterium thermosaccharolyticum (strain ATCC 7956 / DSM 571 / NCIB 9385 / NCA 3814) GN=etfB PE=3 SV=1 9 226 6.0E-25
sp|P53570|ETFB_METME Electron transfer flavoprotein subunit beta OS=Methylophilus methylotrophus GN=etfB PE=1 SV=1 9 225 1.0E-24
sp|O85691|ETFB_MEGEL Electron transfer flavoprotein subunit beta OS=Megasphaera elsdenii GN=etfB PE=3 SV=1 9 245 1.0E-23
sp|P52040|ETFB_CLOAB Electron transfer flavoprotein subunit beta OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) GN=etfB PE=3 SV=2 9 226 7.0E-23
sp|P53577|FIXA_BRADU Protein FixA OS=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) GN=fixA PE=3 SV=2 9 226 3.0E-22
sp|P64098|ETFB_MYCBO Electron transfer flavoprotein subunit beta OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=etfB PE=1 SV=1 8 226 1.0E-20
sp|P9WNG6|ETFB_MYCTO Electron transfer flavoprotein subunit beta OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=etfB PE=3 SV=1 8 226 1.0E-20
sp|P9WNG7|ETFB_MYCTU Electron transfer flavoprotein subunit beta OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=etfB PE=1 SV=1 8 226 1.0E-20
sp|O33095|ETFB_MYCLE Electron transfer flavoprotein subunit beta OS=Mycobacterium leprae (strain TN) GN=etfB PE=3 SV=1 8 227 2.0E-20
sp|P26482|FIXA_AZOC5 Protein FixA OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 / NBRC 14845 / NCIMB 13405 / ORS 571) GN=fixA PE=3 SV=1 9 226 1.0E-19
sp|Q53210|FIXA_RHISN Protein FixA OS=Rhizobium sp. (strain NGR234) GN=fixA PE=3 SV=1 9 226 1.0E-19
sp|P09818|FIXA_RHIME Protein FixA OS=Rhizobium meliloti (strain 1021) GN=fixA PE=3 SV=1 9 225 5.0E-19
sp|Q05559|FIXA_RHILP Protein FixA OS=Rhizobium leguminosarum bv. phaseoli GN=fixA PE=3 SV=1 9 252 1.0E-18
sp|G3KIM7|ETFB_CLOPR Acryloyl-CoA reductase electron transfer subunit gamma OS=Clostridium propionicum GN=acrB PE=1 SV=1 9 260 1.0E-16
sp|Q8FLA3|FIXA_ECOL6 Protein FixA OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=fixA PE=3 SV=2 25 242 2.0E-08
sp|B7MAG4|FIXA_ECO45 Protein FixA OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=fixA PE=3 SV=1 25 242 2.0E-08
sp|B7UI87|FIXA_ECO27 Protein FixA OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=fixA PE=3 SV=1 25 242 2.0E-08
sp|B7MNP8|FIXA_ECO81 Protein FixA OS=Escherichia coli O81 (strain ED1a) GN=fixA PE=3 SV=1 25 242 3.0E-08
sp|Q0TLU8|FIXA_ECOL5 Protein FixA OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=fixA PE=3 SV=1 25 242 3.0E-08
sp|Q8Z9L0|FIXA_SALTI Protein FixA OS=Salmonella typhi GN=fixA PE=3 SV=1 42 242 4.0E-07
sp|B5BL59|FIXA_SALPK Protein FixA OS=Salmonella paratyphi A (strain AKU_12601) GN=fixA PE=3 SV=1 42 242 4.0E-07
sp|Q5PIN4|FIXA_SALPA Protein FixA OS=Salmonella paratyphi A (strain ATCC 9150 / SARB42) GN=fixA PE=3 SV=1 42 242 4.0E-07
sp|P76201|YDIQ_ECOLI Putative electron transfer flavoprotein subunit YdiQ OS=Escherichia coli (strain K12) GN=ydiQ PE=3 SV=2 25 261 1.0E-06
sp|Q8ZRX0|FIXA_SALTY Protein FixA OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=fixA PE=3 SV=1 42 242 2.0E-06
sp|A9MYK3|FIXA_SALPB Protein FixA OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=fixA PE=3 SV=1 42 242 2.0E-06
sp|B4T6K2|FIXA_SALNS Protein FixA OS=Salmonella newport (strain SL254) GN=fixA PE=3 SV=1 42 242 2.0E-06
sp|B5F756|FIXA_SALA4 Protein FixA OS=Salmonella agona (strain SL483) GN=fixA PE=3 SV=1 42 242 2.0E-06
sp|B5RGA8|FIXA_SALG2 Protein FixA OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=fixA PE=3 SV=1 42 242 6.0E-06
sp|B5FHH0|FIXA_SALDC Protein FixA OS=Salmonella dublin (strain CT_02021853) GN=fixA PE=3 SV=1 42 242 6.0E-06
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|097860
MRPTPARLLNILVPVKRAVDYAVKIRVNPQQTGIDTNVKHSMNPFDEIAVEEAVRLRERFKDEVKSIKAITIGPP
KSLDTLRTALAMGADSAIHVEISESSPSPEPLAVAKTLKAVIERQKEGVDLVILGKQSIDDDLGLTGQMLSGLMG
WSQATFASKVDVDIAKKEAVVTREIDGGGEEVRCKLPLIVTTDLRLNEPRYASLPNIMKAKKKPVEKLSASDLGV
DLTPILETLKVTEPPQRVGGGKVESVDELVAKLKEAGITAV*
Coding >Agabi119p4|097860
ATGAGACCGACTCCTGCACGTCTGCTCAACATTCTTGTTCCTGTTAAACGTGCAGTGGACTATGCGGTCAAGATC
CGAGTCAACCCACAACAAACGGGTATCGACACAAATGTTAAGCATTCTATGAACCCTTTCGATGAAATTGCCGTC
GAGGAAGCCGTTCGCCTCCGCGAACGTTTCAAAGATGAAGTGAAGTCAATCAAAGCTATCACAATCGGTCCTCCA
AAATCCCTCGATACCCTTCGTACAGCTTTGGCAATGGGTGCCGACTCGGCCATTCATGTCGAAATTTCCGAATCC
TCCCCCTCACCAGAACCTCTCGCCGTCGCCAAAACACTCAAAGCCGTCATTGAACGGCAGAAAGAAGGAGTAGAT
TTGGTGATATTGGGTAAACAATCCATTGACGATGATCTCGGGCTGACGGGACAAATGCTTTCTGGATTGATGGGT
TGGAGTCAGGCGACTTTTGCGAGCAAAGTTGATGTAGACATCGCAAAAAAAGAGGCTGTAGTAACTAGGGAAATT
GACGGTGGTGGGGAGGAAGTGAGGTGTAAGCTGCCGTTAATTGTGACGACAGACTTGAGGCTCAATGAACCTCGT
TACGCGTCATTGCCTAATATCATGAAAGCGAAGAAAAAACCCGTAGAAAAACTCAGTGCTTCGGACCTAGGAGTC
GATTTGACCCCCATTCTCGAGACTCTCAAGGTGACGGAACCTCCTCAACGTGTCGGTGGCGGAAAGGTAGAGTCC
GTAGATGAGCTTGTGGCAAAACTCAAAGAGGCCGGAATTACCGCTGTTTAG
Transcript >Agabi119p4|097860
ATGAGACCGACTCCTGCACGTCTGCTCAACATTCTTGTTCCTGTTAAACGTGCAGTGGACTATGCGGTCAAGATC
CGAGTCAACCCACAACAAACGGGTATCGACACAAATGTTAAGCATTCTATGAACCCTTTCGATGAAATTGCCGTC
GAGGAAGCCGTTCGCCTCCGCGAACGTTTCAAAGATGAAGTGAAGTCAATCAAAGCTATCACAATCGGTCCTCCA
AAATCCCTCGATACCCTTCGTACAGCTTTGGCAATGGGTGCCGACTCGGCCATTCATGTCGAAATTTCCGAATCC
TCCCCCTCACCAGAACCTCTCGCCGTCGCCAAAACACTCAAAGCCGTCATTGAACGGCAGAAAGAAGGAGTAGAT
TTGGTGATATTGGGTAAACAATCCATTGACGATGATCTCGGGCTGACGGGACAAATGCTTTCTGGATTGATGGGT
TGGAGTCAGGCGACTTTTGCGAGCAAAGTTGATGTAGACATCGCAAAAAAAGAGGCTGTAGTAACTAGGGAAATT
GACGGTGGTGGGGAGGAAGTGAGGTGTAAGCTGCCGTTAATTGTGACGACAGACTTGAGGCTCAATGAACCTCGT
TACGCGTCATTGCCTAATATCATGAAAGCGAAGAAAAAACCCGTAGAAAAACTCAGTGCTTCGGACCTAGGAGTC
GATTTGACCCCCATTCTCGAGACTCTCAAGGTGACGGAACCTCCTCAACGTGTCGGTGGCGGAAAGGTAGAGTCC
GTAGATGAGCTTGTGGCAAAACTCAAAGAGGCCGGAATTACCGCTGTTTAG
Gene >Agabi119p4|097860
ATGAGACCGACTCCTGCACGTCTGCTCAACATTCTTGTTCCTGTTAAACGGTATAGTATATATTTCAAATGTTTC
GCTGGTCTAATGTTGAACGTTGGTTCCCAACAGTGCAGTGGACTATGCGGTCAAGATCCGAGTCAACCCACAACA
AACGGGTATCGACACAAATGTTAAGCATTCTATGGCACGTTCTTTCCGTATCACTATTGTCAGATTTTGTCTCTA
ATATTACTTTCAACCTCTTAAAAGAACCCTTTCGATGAAATTGGTGCGTAGTCATCGATCCGGACCTTTACAAGC
TCCGTTTATTTTTGTTCTCAAGCCGTCGAGGAAGCCGTTCGCCTCCGCGAACGTTTCAAAGATGAAGTGAAGTCA
ATCAAAGCTATCACAATCGGTCCTCCAAAATCCCTCGATACCCTTCGTACAGCTTTGGCAATGGGTGCCGACTCG
GCCATTCATGTCGAAATTTCCGAATCCTCCCCCTCACCAGAACCTCTCGCCGTCGCCAAAACACTCAAAGCCGTC
ATTGAACGGCAGAAAGAAGGAGTAGATTTGGTGATATTGGGTAAACAATCCATTGACGATGATCTCGGGCTGACG
GGACAAATGCTTTCTGGATTGATGGGTTGGAGTCAGGCGACTTTTGCGAGCAAAGTTGATGTAGACATCGCAAAA
AAAGAGGCTGTAGTAACTAGGGAAATTGACGGTGGTGGGGAGGAAGTGAGGTGTAAGCTGCCGTTAATTGTGACG
ACAGACTTGAGGTGAGTTGTCTGCTCGACGGATTTGTGAAATGGCTGATTTTTTAAATGGTGCTTTAGGCTCAAT
GGTCAGCCCATTTTCTTGCTCTACGCTATATTCATGCACCTCAACTTCTTTTCACAGAACCTCGTTACGCGTCAT
TGCCTAATATCATGAAAGCGAAGAAAAAACCCGTAGAAAAACTCAGTGCTTCGGACCTAGGAGTCGATTTGACCC
CCATTCTCGAGACTCTCAAGGTGACGGAACCTCCTCAACGTGTCGGTGGCGGAAAGGTAGAGTCCGTAGATGAGC
TTGTGGCAAAACTCAAAGAGGCCGGAATTACCGCTGTTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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